RNA–Protein interactions for RNA: ENST00000356937.7

CDK11A-202, Transcript of cyclin dependent kinase 11A, humanhuman

TSL 1 (best)

Gene CDK11A, Length 2,275 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK11A-202ENST00000356937 C7orf65Q6ZTY9 151 aa9.58□□□□□ -0.88
CDK11A-202ENST00000356937 LRP2P98164 4655 aa9.57□□□□□ -0.88
CDK11A-202ENST00000356937 IGKV2D-30A0A075B6S6 120 aa9.56□□□□□ -0.88
CDK11A-202ENST00000356937 IGKV2-30P06310 120 aa9.56□□□□□ -0.88
CDK11A-202ENST00000356937 PCOTHQ58A44 107 aa9.54□□□□□ -0.88
CDK11A-202ENST00000356937 HRES1P13985 223 aa9.49□□□□□ -0.89
CDK11A-202ENST00000356937 SPINK7P58062 85 aa9.47□□□□□ -0.89
CDK11A-202ENST00000356937 HMCN2Q8NDA2 5059 aa9.45□□□□□ -0.9
CDK11A-202ENST00000356937 SEC61BP60468 96 aaKnown RBP9.39□□□□□ -0.91
CDK11A-202ENST00000356937 ACYP2P14621 99 aa9.3□□□□□ -0.92
CDK11A-202ENST00000356937 KRTAP4-1Q9BYQ7 146 aa9.22□□□□□ -0.93
CDK11A-202ENST00000356937 MUC17Q685J3 4493 aa9.22□□□□□ -0.93
CDK11A-202ENST00000356937 DMAC1Q96GE9 116 aa9.22□□□□□ -0.93
CDK11A-202ENST00000356937 SPATA8Q6RVD6 105 aa9.2□□□□□ -0.94
CDK11A-202ENST00000356937 PRAC1Q96KF2 57 aa9.18□□□□□ -0.94
CDK11A-202ENST00000356937 A0A1B0GU69 56 aa9.16□□□□□ -0.94
CDK11A-202ENST00000356937 COX6B2Q6YFQ2 88 aa9.16□□□□□ -0.94
CDK11A-202ENST00000356937 KRTAP3-1Q9BYR8 98 aa9.15□□□□□ -0.94
CDK11A-202ENST00000356937 A0A0A0MQY5 61 aa9.15□□□□□ -0.95
CDK11A-202ENST00000356937 LINC01554Q52M75 96 aa9.15□□□□□ -0.95
CDK11A-202ENST00000356937 ADM2Q7Z4H4 148 aa9.11□□□□□ -0.95
CDK11A-202ENST00000356937 MUC2Q02817 5179 aa9.1□□□□□ -0.95
CDK11A-202ENST00000356937 UQCR11O14957 56 aa9.09□□□□□ -0.95
CDK11A-202ENST00000356937 MIR22HGQ0VDD5 57 aa9.08□□□□□ -0.96
CDK11A-202ENST00000356937 UBR4Q5T4S7 5183 aa9.07□□□□□ -0.96
CDK11A-202ENST00000356937 H1FX-AS1Q4G0G2 97 aa8.98□□□□□ -0.97
CDK11A-202ENST00000356937 RNF213Q63HN8 5207 aa8.98□□□□□ -0.97
CDK11A-202ENST00000356937 KRTAP19-2Q3LHN2 52 aa8.91□□□□□ -0.98
CDK11A-202ENST00000356937 CSAG1Q6PB30 78 aa8.91□□□□□ -0.98
CDK11A-202ENST00000356937 S4R3F8 94 aa8.91□□□□□ -0.98
CDK11A-202ENST00000356937 KRTAP3-3Q9BYR6 98 aa8.83□□□□□ -1
CDK11A-202ENST00000356937 FLGP20930 4061 aaPredicted RBP8.77□□□□□ -1.01
CDK11A-202ENST00000356937 LCE2CQ5TA81 110 aa8.76□□□□□ -1.01
CDK11A-202ENST00000356937 FAT4Q6V0I7 4981 aa8.7□□□□□ -1.02
CDK11A-202ENST00000356937 KRTAP25-1Q3LHN0 102 aa8.66□□□□□ -1.02
CDK11A-202ENST00000356937 H0YAA0 97 aa8.65□□□□□ -1.03
CDK11A-202ENST00000356937 MT1HP80294 61 aa8.6□□□□□ -1.03
CDK11A-202ENST00000356937 M0R2T5 61 aa8.57□□□□□ -1.04
CDK11A-202ENST00000356937 ROMO1P60602 79 aa8.57□□□□□ -1.04
CDK11A-202ENST00000356937 A0A1B0GU33 70 aa8.56□□□□□ -1.04
CDK11A-202ENST00000356937 KRTAP3-2Q9BYR7 98 aa8.49□□□□□ -1.05
CDK11A-202ENST00000356937 KRTAP10-6P60371 365 aaPredicted RBP8.46□□□□□ -1.05
CDK11A-202ENST00000356937 P0C880 135 aa8.46□□□□□ -1.06
CDK11A-202ENST00000356937 K7ERS5 55 aa8.44□□□□□ -1.06
CDK11A-202ENST00000356937 LCE2AQ5TA79 106 aaPredicted RBP8.31□□□□□ -1.08
CDK11A-202ENST00000356937 LORP23490 312 aaPredicted RBP8.29□□□□□ -1.08
CDK11A-202ENST00000356937 KRTAP9-8Q9BYQ0 159 aa8.27□□□□□ -1.09
CDK11A-202ENST00000356937 KRTAP13-4Q3LI77 160 aa8.25□□□□□ -1.09
CDK11A-202ENST00000356937 CRIPTQ9P021 101 aa8.25□□□□□ -1.09
CDK11A-202ENST00000356937 MT2AP02795 61 aa8.24□□□□□ -1.09
CDK11A-202ENST00000356937 R4GN34 69 aa8.22□□□□□ -1.09
CDK11A-202ENST00000356937 M0QZ58 72 aa8.2□□□□□ -1.1
CDK11A-202ENST00000356937 KRTAP10-10P60014 251 aa8.2□□□□□ -1.1
CDK11A-202ENST00000356937 MT1FP04733 61 aa8.2□□□□□ -1.1
CDK11A-202ENST00000356937 A0A0D9SG42 100 aa8.13□□□□□ -1.11
CDK11A-202ENST00000356937 SPINT4Q6UDR6 99 aa8.09□□□□□ -1.11
CDK11A-202ENST00000356937 KRTAP15-1Q3LI76 137 aa8.01□□□□□ -1.13
CDK11A-202ENST00000356937 KRTAP19-1Q8IUB9 90 aa8.01□□□□□ -1.13
CDK11A-202ENST00000356937 SPRR2GQ9BYE4 73 aa8□□□□□ -1.13
CDK11A-202ENST00000356937 KRTAP9-3Q9BYQ3 159 aa7.96□□□□□ -1.13
CDK11A-202ENST00000356937 LUZP6Q538Z0 58 aa7.95□□□□□ -1.14
CDK11A-202ENST00000356937 C10orf95Q9H7T3 257 aa7.93□□□□□ -1.14
CDK11A-202ENST00000356937 KRTAP12-1P59990 96 aa7.91□□□□□ -1.14
CDK11A-202ENST00000356937 NDUFAF8A1L188 74 aa7.9□□□□□ -1.14
CDK11A-202ENST00000356937 KRTAP12-2P59991 146 aa7.9□□□□□ -1.14
CDK11A-202ENST00000356937 KRTAP19-8Q3LI54 63 aa7.8□□□□□ -1.16
CDK11A-202ENST00000356937 LCE2BO14633 110 aa7.78□□□□□ -1.16
CDK11A-202ENST00000356937 PLAC4Q8WY50 150 aa7.76□□□□□ -1.17
CDK11A-202ENST00000356937 MT1BP07438 61 aa7.73□□□□□ -1.17
CDK11A-202ENST00000356937 CAMK2N1Q7Z7J9 78 aa7.69□□□□□ -1.18
CDK11A-202ENST00000356937 USH2AO75445 5202 aa7.61□□□□□ -1.19
CDK11A-202ENST00000356937 LCE2DQ5TA82 110 aaPredicted RBP7.56□□□□□ -1.2
CDK11A-202ENST00000356937 FSIP2Q5CZC0 6907 aa7.48□□□□□ -1.21
CDK11A-202ENST00000356937 MT1XP80297 61 aa7.46□□□□□ -1.22
CDK11A-202ENST00000356937 KRTAP10-5P60370 271 aa7.44□□□□□ -1.22
CDK11A-202ENST00000356937 SSPOA2VEC9 5147 aa7.39□□□□□ -1.23
CDK11A-202ENST00000356937 PRO2289Q9P1D8 64 aa7.38□□□□□ -1.23
CDK11A-202ENST00000356937 KRTAP9-2Q9BYQ4 174 aa7.37□□□□□ -1.23
CDK11A-202ENST00000356937 KRTAP19-6Q3LI70 58 aa7.29□□□□□ -1.24
CDK11A-202ENST00000356937 TNP1P09430 55 aa7.28□□□□□ -1.24
CDK11A-202ENST00000356937 PP632Q6XCG6 107 aa7.27□□□□□ -1.25
CDK11A-202ENST00000356937 KRTAP10-7P60409 375 aaPredicted RBP7.18□□□□□ -1.26
CDK11A-202ENST00000356937 FCGBPQ9Y6R7 5405 aaPredicted RBP7.09□□□□□ -1.27
CDK11A-202ENST00000356937 CRCT1Q9UGL9 99 aa7.09□□□□□ -1.27
CDK11A-202ENST00000356937 KRTAP10-12P60413 245 aa7.06□□□□□ -1.28
CDK11A-202ENST00000356937 LCE3AQ5TA76 89 aa7.01□□□□□ -1.29
CDK11A-202ENST00000356937 KMT2DO14686 5537 aa6.97□□□□□ -1.29
CDK11A-202ENST00000356937 KRTAP23-1A1A580 65 aa6.97□□□□□ -1.29
CDK11A-202ENST00000356937 KRTAP4-8A0A0G2JLE6 195 aa6.94□□□□□ -1.3
CDK11A-202ENST00000356937 KRTAP4-8Q9BYQ9 185 aa6.94□□□□□ -1.3
CDK11A-202ENST00000356937 SPRR5A0A1B0GTR4 108 aa6.93□□□□□ -1.3
CDK11A-202ENST00000356937 KRTAP9-6A0A140TA67 174 aa6.81□□□□□ -1.32
CDK11A-202ENST00000356937 KRTAP8-1Q8IUC2 63 aa6.81□□□□□ -1.32
CDK11A-202ENST00000356937 MACF1Q9UPN3 7388 aaKnown RBP6.79□□□□□ -1.32
CDK11A-202ENST00000356937 KRTAP19-5Q3LI72 72 aa6.74□□□□□ -1.33
CDK11A-202ENST00000356937 KRTAP12-3P60328 96 aa6.72□□□□□ -1.33
CDK11A-202ENST00000356937 KRTAP19-7Q3SYF9 63 aa6.65□□□□□ -1.34
CDK11A-202ENST00000356937 SYNE2Q8WXH0 6885 aaKnown RBP6.63□□□□□ -1.35
CDK11A-202ENST00000356937 KRTAP9-1A8MXZ3 250 aaPredicted RBP6.56□□□□□ -1.36
CDK11A-202ENST00000356937 MT1EP04732 61 aa6.53□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 66.7 ms