RNA–Protein interactions for RNA: ENST00000356462.10

NEDD4L-202, Transcript of neural precursor cell expressed, developmentally down-regulated 4-like, E3 ubiquitin protein ligase, humanhuman

TSL 1 (best) BASIC

Gene NEDD4L, Length 3,335 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4L-202ENST00000356462 UQCR11O14957 56 aa8.08□□□□□ -1.12
NEDD4L-202ENST00000356462 ABCA13Q86UQ4 5058 aa8.08□□□□□ -1.12
NEDD4L-202ENST00000356462 KRTAP10-8P60410 259 aa8.08□□□□□ -1.12
NEDD4L-202ENST00000356462 TNXBP22105 4242 aa8.07□□□□□ -1.12
NEDD4L-202ENST00000356462 SPATA8Q6RVD6 105 aa8.06□□□□□ -1.12
NEDD4L-202ENST00000356462 H3BS24 57 aa8.04□□□□□ -1.12
NEDD4L-202ENST00000356462 XP32Q5T750 250 aa8.04□□□□□ -1.12
NEDD4L-202ENST00000356462 A0A0D9SG42 100 aa7.99□□□□□ -1.13
NEDD4L-202ENST00000356462 CRIPTQ9P021 101 aa7.98□□□□□ -1.13
NEDD4L-202ENST00000356462 COX6B2Q6YFQ2 88 aa7.98□□□□□ -1.13
NEDD4L-202ENST00000356462 MT1HL1P0DM35 61 aa7.96□□□□□ -1.14
NEDD4L-202ENST00000356462 RPL37P61927 97 aaKnown RBP7.94□□□□□ -1.14
NEDD4L-202ENST00000356462 A0A1B0GU33 70 aa7.93□□□□□ -1.14
NEDD4L-202ENST00000356462 CSAG1Q6PB30 78 aa7.93□□□□□ -1.14
NEDD4L-202ENST00000356462 J3QL48 77 aa7.9□□□□□ -1.15
NEDD4L-202ENST00000356462 MUC2Q02817 5179 aa7.89□□□□□ -1.15
NEDD4L-202ENST00000356462 LINC01554Q52M75 96 aa7.87□□□□□ -1.15
NEDD4L-202ENST00000356462 H0YAA0 97 aa7.87□□□□□ -1.15
NEDD4L-202ENST00000356462 HERC2O95714 4834 aa7.83□□□□□ -1.16
NEDD4L-202ENST00000356462 S4R3F8 94 aa7.82□□□□□ -1.16
NEDD4L-202ENST00000356462 H1FX-AS1Q4G0G2 97 aa7.8□□□□□ -1.16
NEDD4L-202ENST00000356462 P0C880 135 aa7.75□□□□□ -1.17
NEDD4L-202ENST00000356462 KRTAP3-3Q9BYR6 98 aa7.73□□□□□ -1.17
NEDD4L-202ENST00000356462 KRTAP13-4Q3LI77 160 aa7.68□□□□□ -1.18
NEDD4L-202ENST00000356462 SPINT4Q6UDR6 99 aa7.67□□□□□ -1.18
NEDD4L-202ENST00000356462 HERC1Q15751 4861 aa7.67□□□□□ -1.18
NEDD4L-202ENST00000356462 K7ERS5 55 aa7.63□□□□□ -1.19
NEDD4L-202ENST00000356462 KRTAP10-6P60371 365 aaPredicted RBP7.62□□□□□ -1.19
NEDD4L-202ENST00000356462 TPRXLQ17RH7 258 aa7.61□□□□□ -1.19
NEDD4L-202ENST00000356462 KRTAP3-2Q9BYR7 98 aa7.55□□□□□ -1.2
NEDD4L-202ENST00000356462 RNF213Q63HN8 5207 aa7.52□□□□□ -1.21
NEDD4L-202ENST00000356462 KRTAP4-1Q9BYQ7 146 aa7.52□□□□□ -1.21
NEDD4L-202ENST00000356462 PCLOQ9Y6V0 5065 aa7.51□□□□□ -1.21
NEDD4L-202ENST00000356462 FAT4Q6V0I7 4981 aa7.49□□□□□ -1.21
NEDD4L-202ENST00000356462 SEC61BP60468 96 aaKnown RBP7.48□□□□□ -1.21
NEDD4L-202ENST00000356462 M0QZ58 72 aa7.45□□□□□ -1.22
NEDD4L-202ENST00000356462 C10orf95Q9H7T3 257 aa7.45□□□□□ -1.22
NEDD4L-202ENST00000356462 KRTAP12-2P59991 146 aa7.42□□□□□ -1.22
NEDD4L-202ENST00000356462 R4GN34 69 aa7.41□□□□□ -1.22
NEDD4L-202ENST00000356462 BIRC6Q9NR09 4857 aa7.37□□□□□ -1.23
NEDD4L-202ENST00000356462 LORP23490 312 aaPredicted RBP7.37□□□□□ -1.23
NEDD4L-202ENST00000356462 ROMO1P60602 79 aa7.37□□□□□ -1.23
NEDD4L-202ENST00000356462 KRTAP25-1Q3LHN0 102 aa7.35□□□□□ -1.23
NEDD4L-202ENST00000356462 UBR4Q5T4S7 5183 aa7.33□□□□□ -1.24
NEDD4L-202ENST00000356462 MUC17Q685J3 4493 aa7.28□□□□□ -1.24
NEDD4L-202ENST00000356462 KRTAP12-1P59990 96 aa7.26□□□□□ -1.25
NEDD4L-202ENST00000356462 NDUFAF8A1L188 74 aa7.22□□□□□ -1.25
NEDD4L-202ENST00000356462 M0R2T5 61 aa7.21□□□□□ -1.26
NEDD4L-202ENST00000356462 HMCN2Q8NDA2 5059 aa7.14□□□□□ -1.27
NEDD4L-202ENST00000356462 CAMK2N1Q7Z7J9 78 aa7.12□□□□□ -1.27
NEDD4L-202ENST00000356462 KRTAP19-2Q3LHN2 52 aa6.98□□□□□ -1.29
NEDD4L-202ENST00000356462 FLGP20930 4061 aaPredicted RBP6.95□□□□□ -1.3
NEDD4L-202ENST00000356462 KRTAP10-10P60014 251 aa6.82□□□□□ -1.32
NEDD4L-202ENST00000356462 LCE2CQ5TA81 110 aa6.78□□□□□ -1.32
NEDD4L-202ENST00000356462 MT1HP80294 61 aa6.71□□□□□ -1.34
NEDD4L-202ENST00000356462 KRTAP15-1Q3LI76 137 aa6.7□□□□□ -1.34
NEDD4L-202ENST00000356462 USH2AO75445 5202 aa6.7□□□□□ -1.34
NEDD4L-202ENST00000356462 PLAC4Q8WY50 150 aa6.68□□□□□ -1.34
NEDD4L-202ENST00000356462 A0A0A0MQY5 61 aa6.68□□□□□ -1.34
NEDD4L-202ENST00000356462 FSIP2Q5CZC0 6907 aa6.65□□□□□ -1.35
NEDD4L-202ENST00000356462 MT1FP04733 61 aa6.62□□□□□ -1.35
NEDD4L-202ENST00000356462 TNP1P09430 55 aa6.58□□□□□ -1.36
NEDD4L-202ENST00000356462 MT2AP02795 61 aa6.56□□□□□ -1.36
NEDD4L-202ENST00000356462 KRTAP19-1Q8IUB9 90 aa6.56□□□□□ -1.36
NEDD4L-202ENST00000356462 LUZP6Q538Z0 58 aa6.53□□□□□ -1.36
NEDD4L-202ENST00000356462 KRTAP9-8Q9BYQ0 159 aa6.46□□□□□ -1.38
NEDD4L-202ENST00000356462 KMT2DO14686 5537 aa6.44□□□□□ -1.38
NEDD4L-202ENST00000356462 SPRR2GQ9BYE4 73 aa6.41□□□□□ -1.38
NEDD4L-202ENST00000356462 LCE3AQ5TA76 89 aa6.33□□□□□ -1.4
NEDD4L-202ENST00000356462 PP632Q6XCG6 107 aa6.31□□□□□ -1.4
NEDD4L-202ENST00000356462 MT1BP07438 61 aa6.24□□□□□ -1.41
NEDD4L-202ENST00000356462 MT1XP80297 61 aa6.16□□□□□ -1.42
NEDD4L-202ENST00000356462 KRTAP9-3Q9BYQ3 159 aa6.16□□□□□ -1.42
NEDD4L-202ENST00000356462 KRTAP10-5P60370 271 aa6.15□□□□□ -1.42
NEDD4L-202ENST00000356462 KRTAP10-7P60409 375 aaPredicted RBP6.15□□□□□ -1.42
NEDD4L-202ENST00000356462 LCE2BO14633 110 aa6.1□□□□□ -1.43
NEDD4L-202ENST00000356462 KRTAP19-8Q3LI54 63 aa6.09□□□□□ -1.44
NEDD4L-202ENST00000356462 KRTAP10-12P60413 245 aa6.08□□□□□ -1.44
NEDD4L-202ENST00000356462 KRTAP4-8A0A0G2JLE6 195 aa6□□□□□ -1.45
NEDD4L-202ENST00000356462 KRTAP4-8Q9BYQ9 185 aa6□□□□□ -1.45
NEDD4L-202ENST00000356462 PRO2289Q9P1D8 64 aa5.98□□□□□ -1.45
NEDD4L-202ENST00000356462 KRTAP12-3P60328 96 aa5.97□□□□□ -1.45
NEDD4L-202ENST00000356462 LCE2AQ5TA79 106 aaPredicted RBP5.9□□□□□ -1.47
NEDD4L-202ENST00000356462 SSPOA2VEC9 5147 aa5.87□□□□□ -1.47
NEDD4L-202ENST00000356462 KRTAP23-1A1A580 65 aa5.84□□□□□ -1.47
NEDD4L-202ENST00000356462 KRTAP19-5Q3LI72 72 aa5.84□□□□□ -1.47
NEDD4L-202ENST00000356462 KRTAP8-1Q8IUC2 63 aa5.84□□□□□ -1.47
NEDD4L-202ENST00000356462 DSTQ03001 7570 aaKnown RBP5.83□□□□□ -1.48
NEDD4L-202ENST00000356462 MUC12Q9UKN1 5478 aa5.74□□□□□ -1.49
NEDD4L-202ENST00000356462 KRTAP4-7Q9BYR0 210 aa5.71□□□□□ -1.49
NEDD4L-202ENST00000356462 SPRR5A0A1B0GTR4 108 aa5.66□□□□□ -1.5
NEDD4L-202ENST00000356462 FCGBPQ9Y6R7 5405 aaPredicted RBP5.66□□□□□ -1.5
NEDD4L-202ENST00000356462 CRCT1Q9UGL9 99 aa5.52□□□□□ -1.53
NEDD4L-202ENST00000356462 LCE3CQ5T5A8 94 aa5.51□□□□□ -1.53
NEDD4L-202ENST00000356462 OBSCNQ5VST9 7968 aa5.5□□□□□ -1.53
NEDD4L-202ENST00000356462 SYNE1Q8NF91 8797 aaKnown RBP5.49□□□□□ -1.53
NEDD4L-202ENST00000356462 KRTAP19-7Q3SYF9 63 aa5.47□□□□□ -1.53
NEDD4L-202ENST00000356462 SYNE2Q8WXH0 6885 aaKnown RBP5.46□□□□□ -1.54
NEDD4L-202ENST00000356462 MACF1Q9UPN3 7388 aaKnown RBP5.44□□□□□ -1.54
NEDD4L-202ENST00000356462 KRTAP9-6A8MVA2 160 aa5.41□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 55.2 ms