RNA–Protein interactions for RNA: ENST00000355633.5

HOXA1-202, Transcript of homeobox A1, humanhuman

TSL 1 (best) BASIC

Gene HOXA1, Length 2,016 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA1-202ENST00000355633 CDC42SE1Q9NRR8 79 aa7.2□□□□□ -1.26
HOXA1-202ENST00000355633 A8MU10 97 aa7.19□□□□□ -1.26
HOXA1-202ENST00000355633 SPANXA2-OT1Q8N9U9 137 aa7.19□□□□□ -1.26
HOXA1-202ENST00000355633 A6NED7 52 aa7.18□□□□□ -1.26
HOXA1-202ENST00000355633 SPINK7P58062 85 aa7.17□□□□□ -1.26
HOXA1-202ENST00000355633 H3BS24 57 aa7.15□□□□□ -1.27
HOXA1-202ENST00000355633 LRP2P98164 4655 aa7.15□□□□□ -1.27
HOXA1-202ENST00000355633 HRES1P13985 223 aa7.14□□□□□ -1.27
HOXA1-202ENST00000355633 SEC61BP60468 96 aaKnown RBP7.13□□□□□ -1.27
HOXA1-202ENST00000355633 HERC1Q15751 4861 aa7.12□□□□□ -1.27
HOXA1-202ENST00000355633 HMCN2Q8NDA2 5059 aa7.05□□□□□ -1.28
HOXA1-202ENST00000355633 LINC01558Q9Y6Z2 57 aa7.03□□□□□ -1.28
HOXA1-202ENST00000355633 DMAC1Q96GE9 116 aa7.02□□□□□ -1.29
HOXA1-202ENST00000355633 LINC01554Q52M75 96 aa7.01□□□□□ -1.29
HOXA1-202ENST00000355633 COA5Q86WW8 74 aa7.01□□□□□ -1.29
HOXA1-202ENST00000355633 ACYP2P14621 99 aa6.98□□□□□ -1.29
HOXA1-202ENST00000355633 COX6B2Q6YFQ2 88 aa6.98□□□□□ -1.29
HOXA1-202ENST00000355633 MUC17Q685J3 4493 aa6.97□□□□□ -1.29
HOXA1-202ENST00000355633 KRTAP4-1Q9BYQ7 146 aa6.96□□□□□ -1.3
HOXA1-202ENST00000355633 KRTAP3-1Q9BYR8 98 aa6.94□□□□□ -1.3
HOXA1-202ENST00000355633 PRAC1Q96KF2 57 aa6.86□□□□□ -1.31
HOXA1-202ENST00000355633 H1FX-AS1Q4G0G2 97 aa6.83□□□□□ -1.32
HOXA1-202ENST00000355633 S4R3F8 94 aa6.77□□□□□ -1.33
HOXA1-202ENST00000355633 KRTAP19-2Q3LHN2 52 aa6.76□□□□□ -1.33
HOXA1-202ENST00000355633 ADM2Q7Z4H4 148 aa6.76□□□□□ -1.33
HOXA1-202ENST00000355633 MUC2Q02817 5179 aa6.74□□□□□ -1.33
HOXA1-202ENST00000355633 UBR4Q5T4S7 5183 aa6.72□□□□□ -1.33
HOXA1-202ENST00000355633 LCE2BO14633 110 aa6.7□□□□□ -1.34
HOXA1-202ENST00000355633 SPATA8Q6RVD6 105 aa6.7□□□□□ -1.34
HOXA1-202ENST00000355633 RNF213Q63HN8 5207 aa6.66□□□□□ -1.34
HOXA1-202ENST00000355633 CSAG1Q6PB30 78 aa6.65□□□□□ -1.35
HOXA1-202ENST00000355633 LCE2CQ5TA81 110 aa6.62□□□□□ -1.35
HOXA1-202ENST00000355633 A0A1B0GU69 56 aa6.62□□□□□ -1.35
HOXA1-202ENST00000355633 MIR22HGQ0VDD5 57 aa6.61□□□□□ -1.35
HOXA1-202ENST00000355633 UQCR11O14957 56 aa6.6□□□□□ -1.35
HOXA1-202ENST00000355633 ROMO1P60602 79 aa6.54□□□□□ -1.36
HOXA1-202ENST00000355633 FLGP20930 4061 aaPredicted RBP6.52□□□□□ -1.37
HOXA1-202ENST00000355633 MT1HP80294 61 aa6.5□□□□□ -1.37
HOXA1-202ENST00000355633 FAT4Q6V0I7 4981 aa6.47□□□□□ -1.37
HOXA1-202ENST00000355633 H0YAA0 97 aa6.47□□□□□ -1.37
HOXA1-202ENST00000355633 KRTAP25-1Q3LHN0 102 aa6.47□□□□□ -1.37
HOXA1-202ENST00000355633 M0R2T5 61 aa6.46□□□□□ -1.38
HOXA1-202ENST00000355633 KRTAP10-6P60371 365 aaPredicted RBP6.44□□□□□ -1.38
HOXA1-202ENST00000355633 LCE2AQ5TA79 106 aaPredicted RBP6.44□□□□□ -1.38
HOXA1-202ENST00000355633 P0C880 135 aa6.42□□□□□ -1.38
HOXA1-202ENST00000355633 A0A1B0GU33 70 aa6.38□□□□□ -1.39
HOXA1-202ENST00000355633 KRTAP4-8Q9BYQ9 185 aa6.37□□□□□ -1.39
HOXA1-202ENST00000355633 LORP23490 312 aaPredicted RBP6.26□□□□□ -1.41
HOXA1-202ENST00000355633 KRTAP13-4Q3LI77 160 aa6.26□□□□□ -1.41
HOXA1-202ENST00000355633 KRTAP9-8Q9BYQ0 159 aa6.25□□□□□ -1.41
HOXA1-202ENST00000355633 A0A0A0MQY5 61 aa6.25□□□□□ -1.41
HOXA1-202ENST00000355633 M0QZ58 72 aa6.25□□□□□ -1.41
HOXA1-202ENST00000355633 R4GN34 69 aa6.25□□□□□ -1.41
HOXA1-202ENST00000355633 KRTAP9-1A8MXZ3 250 aaPredicted RBP6.23□□□□□ -1.41
HOXA1-202ENST00000355633 MT2AP02795 61 aa6.23□□□□□ -1.41
HOXA1-202ENST00000355633 KRTAP9-2Q9BYQ4 174 aa6.22□□□□□ -1.41
HOXA1-202ENST00000355633 CRIPTQ9P021 101 aa6.2□□□□□ -1.42
HOXA1-202ENST00000355633 KRTAP9-6A0A140TA67 174 aa6.2□□□□□ -1.42
HOXA1-202ENST00000355633 MT1FP04733 61 aa6.2□□□□□ -1.42
HOXA1-202ENST00000355633 KRTAP10-10P60014 251 aa6.19□□□□□ -1.42
HOXA1-202ENST00000355633 K7ERS5 55 aa6.17□□□□□ -1.42
HOXA1-202ENST00000355633 A0A0D9SG42 100 aa6.16□□□□□ -1.42
HOXA1-202ENST00000355633 SPINT4Q6UDR6 99 aa6.11□□□□□ -1.43
HOXA1-202ENST00000355633 SPRR2GQ9BYE4 73 aa6.08□□□□□ -1.44
HOXA1-202ENST00000355633 KRTAP19-1Q8IUB9 90 aa6.07□□□□□ -1.44
HOXA1-202ENST00000355633 NDUFAF8A1L188 74 aa6.06□□□□□ -1.44
HOXA1-202ENST00000355633 LCE3BQ5TA77 95 aa6.05□□□□□ -1.44
HOXA1-202ENST00000355633 KRTAP12-1P59990 96 aa6.03□□□□□ -1.44
HOXA1-202ENST00000355633 KRTAP9-3Q9BYQ3 159 aa6.03□□□□□ -1.44
HOXA1-202ENST00000355633 KRTAP12-2P59991 146 aa6.01□□□□□ -1.45
HOXA1-202ENST00000355633 KRTAP15-1Q3LI76 137 aa6.01□□□□□ -1.45
HOXA1-202ENST00000355633 KRTAP4-8A0A0G2JLE6 195 aa5.99□□□□□ -1.45
HOXA1-202ENST00000355633 KRTAP19-8Q3LI54 63 aa5.93□□□□□ -1.46
HOXA1-202ENST00000355633 KRTAP9-9Q9BYP9 154 aa5.9□□□□□ -1.47
HOXA1-202ENST00000355633 KRTAP9-4Q9BYQ2 154 aa5.9□□□□□ -1.47
HOXA1-202ENST00000355633 PLAC4Q8WY50 150 aa5.89□□□□□ -1.47
HOXA1-202ENST00000355633 LUZP6Q538Z0 58 aa5.87□□□□□ -1.47
HOXA1-202ENST00000355633 MT1BP07438 61 aa5.86□□□□□ -1.47
HOXA1-202ENST00000355633 CAMK2N1Q7Z7J9 78 aa5.84□□□□□ -1.47
HOXA1-202ENST00000355633 KRTAP4-7Q9BYR0 210 aa5.83□□□□□ -1.48
HOXA1-202ENST00000355633 KRTAP4-12Q9BQ66 201 aa5.82□□□□□ -1.48
HOXA1-202ENST00000355633 C10orf95Q9H7T3 257 aa5.72□□□□□ -1.49
HOXA1-202ENST00000355633 LCE1DQ5T752 114 aa5.66□□□□□ -1.5
HOXA1-202ENST00000355633 MT1XP80297 61 aa5.65□□□□□ -1.5
HOXA1-202ENST00000355633 USH2AO75445 5202 aa5.65□□□□□ -1.5
HOXA1-202ENST00000355633 KRTAP10-5P60370 271 aa5.64□□□□□ -1.51
HOXA1-202ENST00000355633 PRO2289Q9P1D8 64 aa5.62□□□□□ -1.51
HOXA1-202ENST00000355633 KRTAP4-9Q9BYQ8 210 aa5.56□□□□□ -1.52
HOXA1-202ENST00000355633 KRTAP4-2Q9BYR5 136 aa5.55□□□□□ -1.52
HOXA1-202ENST00000355633 TNP1P09430 55 aa5.55□□□□□ -1.52
HOXA1-202ENST00000355633 KRTAP19-6Q3LI70 58 aa5.53□□□□□ -1.52
HOXA1-202ENST00000355633 SSPOA2VEC9 5147 aa5.47□□□□□ -1.53
HOXA1-202ENST00000355633 FSIP2Q5CZC0 6907 aa5.47□□□□□ -1.53
HOXA1-202ENST00000355633 KRTAP10-7P60409 375 aaPredicted RBP5.43□□□□□ -1.54
HOXA1-202ENST00000355633 KRTAP5-3Q6L8H2 238 aa5.43□□□□□ -1.54
HOXA1-202ENST00000355633 KRTAP10-12P60413 245 aa5.36□□□□□ -1.55
HOXA1-202ENST00000355633 PP632Q6XCG6 107 aa5.35□□□□□ -1.55
HOXA1-202ENST00000355633 KRTAP23-1A1A580 65 aa5.35□□□□□ -1.55
HOXA1-202ENST00000355633 CRCT1Q9UGL9 99 aa5.33□□□□□ -1.56
HOXA1-202ENST00000355633 LCE3AQ5TA76 89 aa5.32□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms