RNA–Protein interactions for RNA: ENST00000355155.5

VPS13B-201, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 1 (best) BASIC

Gene VPS13B, Length 2,822 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-201ENST00000355155 RBM12B-AS1Q9P1G2 102 aa8.63□□□□□ -1.03
VPS13B-201ENST00000355155 KRTAP4-1Q9BYQ7 146 aa8.6□□□□□ -1.03
VPS13B-201ENST00000355155 S4R3F8 94 aa8.58□□□□□ -1.04
VPS13B-201ENST00000355155 A0A1B0GU69 56 aa8.58□□□□□ -1.04
VPS13B-201ENST00000355155 LCA10Q71F78 164 aa8.57□□□□□ -1.04
VPS13B-201ENST00000355155 HMCN2Q8NDA2 5059 aa8.57□□□□□ -1.04
VPS13B-201ENST00000355155 KRTAP19-2Q3LHN2 52 aa8.55□□□□□ -1.04
VPS13B-201ENST00000355155 HERC1Q15751 4861 aa8.52□□□□□ -1.04
VPS13B-201ENST00000355155 SEC61GP60059 68 aa8.47□□□□□ -1.05
VPS13B-201ENST00000355155 PRO0628Q9UI54 55 aa8.47□□□□□ -1.05
VPS13B-201ENST00000355155 CDC42SE1Q9NRR8 79 aa8.45□□□□□ -1.06
VPS13B-201ENST00000355155 A6NED7 52 aa8.43□□□□□ -1.06
VPS13B-201ENST00000355155 BRK1Q8WUW1 75 aa8.43□□□□□ -1.06
VPS13B-201ENST00000355155 SPATA8Q6RVD6 105 aa8.4□□□□□ -1.06
VPS13B-201ENST00000355155 H0YAA0 97 aa8.39□□□□□ -1.07
VPS13B-201ENST00000355155 UQCR11O14957 56 aa8.39□□□□□ -1.07
VPS13B-201ENST00000355155 KRTAP3-2Q9BYR7 98 aa8.38□□□□□ -1.07
VPS13B-201ENST00000355155 KRTAP10-6P60371 365 aaPredicted RBP8.37□□□□□ -1.07
VPS13B-201ENST00000355155 CSAG1Q6PB30 78 aa8.37□□□□□ -1.07
VPS13B-201ENST00000355155 A0A1B0GU33 70 aa8.3□□□□□ -1.08
VPS13B-201ENST00000355155 MIR22HGQ0VDD5 57 aa8.29□□□□□ -1.08
VPS13B-201ENST00000355155 A8MU10 97 aa8.28□□□□□ -1.08
VPS13B-201ENST00000355155 FLGP20930 4061 aaPredicted RBP8.25□□□□□ -1.09
VPS13B-201ENST00000355155 LCE2CQ5TA81 110 aa8.22□□□□□ -1.09
VPS13B-201ENST00000355155 SVIPQ8NHG7 77 aa8.21□□□□□ -1.09
VPS13B-201ENST00000355155 ADM2Q7Z4H4 148 aa8.18□□□□□ -1.1
VPS13B-201ENST00000355155 P0C880 135 aa8.17□□□□□ -1.1
VPS13B-201ENST00000355155 KRTAP13-4Q3LI77 160 aa8.1□□□□□ -1.11
VPS13B-201ENST00000355155 M0QZ58 72 aa8.09□□□□□ -1.11
VPS13B-201ENST00000355155 A6NN06 94 aa8.08□□□□□ -1.12
VPS13B-201ENST00000355155 RNF213Q63HN8 5207 aa8.05□□□□□ -1.12
VPS13B-201ENST00000355155 MUC2Q02817 5179 aa8.01□□□□□ -1.13
VPS13B-201ENST00000355155 PMAIP1Q13794 54 aa7.99□□□□□ -1.13
VPS13B-201ENST00000355155 MT1HP80294 61 aa7.99□□□□□ -1.13
VPS13B-201ENST00000355155 CRIPTQ9P021 101 aa7.94□□□□□ -1.14
VPS13B-201ENST00000355155 UBR4Q5T4S7 5183 aa7.92□□□□□ -1.14
VPS13B-201ENST00000355155 LORP23490 312 aaPredicted RBP7.88□□□□□ -1.15
VPS13B-201ENST00000355155 K7ERS5 55 aa7.85□□□□□ -1.15
VPS13B-201ENST00000355155 R4GN34 69 aa7.85□□□□□ -1.15
VPS13B-201ENST00000355155 KRTAP12-1P59990 96 aa7.84□□□□□ -1.16
VPS13B-201ENST00000355155 KTN1-AS1Q86SY8 53 aa7.82□□□□□ -1.16
VPS13B-201ENST00000355155 FAT4Q6V0I7 4981 aa7.8□□□□□ -1.16
VPS13B-201ENST00000355155 A0A0D9SG42 100 aa7.79□□□□□ -1.16
VPS13B-201ENST00000355155 KRTAP12-2P59991 146 aa7.77□□□□□ -1.17
VPS13B-201ENST00000355155 KRTAP9-8Q9BYQ0 159 aa7.76□□□□□ -1.17
VPS13B-201ENST00000355155 SPRR2GQ9BYE4 73 aa7.72□□□□□ -1.17
VPS13B-201ENST00000355155 MT2AP02795 61 aa7.71□□□□□ -1.17
VPS13B-201ENST00000355155 M0R2T5 61 aa7.71□□□□□ -1.18
VPS13B-201ENST00000355155 MT1FP04733 61 aa7.65□□□□□ -1.18
VPS13B-201ENST00000355155 LCE2AQ5TA79 106 aaPredicted RBP7.63□□□□□ -1.19
VPS13B-201ENST00000355155 KRTAP19-1Q8IUB9 90 aa7.63□□□□□ -1.19
VPS13B-201ENST00000355155 ROMO1P60602 79 aa7.62□□□□□ -1.19
VPS13B-201ENST00000355155 SPINT4Q6UDR6 99 aa7.62□□□□□ -1.19
VPS13B-201ENST00000355155 LINC01554Q52M75 96 aa7.57□□□□□ -1.2
VPS13B-201ENST00000355155 KRTAP10-10P60014 251 aa7.54□□□□□ -1.2
VPS13B-201ENST00000355155 KRTAP19-8Q3LI54 63 aa7.53□□□□□ -1.2
VPS13B-201ENST00000355155 KRTAP9-3Q9BYQ3 159 aa7.49□□□□□ -1.21
VPS13B-201ENST00000355155 PRAC1Q96KF2 57 aa7.44□□□□□ -1.22
VPS13B-201ENST00000355155 C10orf95Q9H7T3 257 aa7.4□□□□□ -1.23
VPS13B-201ENST00000355155 KRTAP25-1Q3LHN0 102 aa7.37□□□□□ -1.23
VPS13B-201ENST00000355155 MT1BP07438 61 aa7.34□□□□□ -1.23
VPS13B-201ENST00000355155 PLAC4Q8WY50 150 aa7.34□□□□□ -1.23
VPS13B-201ENST00000355155 CAMK2N1Q7Z7J9 78 aa7.32□□□□□ -1.24
VPS13B-201ENST00000355155 LCE2BO14633 110 aa7.19□□□□□ -1.26
VPS13B-201ENST00000355155 KRTAP23-1A1A580 65 aa7.17□□□□□ -1.26
VPS13B-201ENST00000355155 MT1XP80297 61 aa7.13□□□□□ -1.27
VPS13B-201ENST00000355155 KRTAP10-5P60370 271 aa7.12□□□□□ -1.27
VPS13B-201ENST00000355155 TNP1P09430 55 aa7.1□□□□□ -1.27
VPS13B-201ENST00000355155 PP632Q6XCG6 107 aa7.09□□□□□ -1.28
VPS13B-201ENST00000355155 KRTAP9-2Q9BYQ4 174 aa6.99□□□□□ -1.29
VPS13B-201ENST00000355155 PRO2289Q9P1D8 64 aa6.98□□□□□ -1.29
VPS13B-201ENST00000355155 LCE2DQ5TA82 110 aaPredicted RBP6.93□□□□□ -1.3
VPS13B-201ENST00000355155 KRTAP9-6A0A140TA67 174 aa6.85□□□□□ -1.31
VPS13B-201ENST00000355155 USH2AO75445 5202 aa6.84□□□□□ -1.31
VPS13B-201ENST00000355155 KRTAP10-12P60413 245 aa6.82□□□□□ -1.32
VPS13B-201ENST00000355155 KRTAP19-6Q3LI70 58 aa6.81□□□□□ -1.32
VPS13B-201ENST00000355155 KRTAP10-7P60409 375 aaPredicted RBP6.78□□□□□ -1.32
VPS13B-201ENST00000355155 LCE3AQ5TA76 89 aa6.77□□□□□ -1.33
VPS13B-201ENST00000355155 KRTAP8-1Q8IUC2 63 aa6.76□□□□□ -1.33
VPS13B-201ENST00000355155 SSPOA2VEC9 5147 aa6.7□□□□□ -1.34
VPS13B-201ENST00000355155 KRTAP15-1Q3LI76 137 aa6.61□□□□□ -1.35
VPS13B-201ENST00000355155 CRCT1Q9UGL9 99 aa6.6□□□□□ -1.35
VPS13B-201ENST00000355155 KRTAP12-3P60328 96 aa6.5□□□□□ -1.37
VPS13B-201ENST00000355155 SPRR5A0A1B0GTR4 108 aa6.44□□□□□ -1.38
VPS13B-201ENST00000355155 KRTAP4-8A0A0G2JLE6 195 aa6.41□□□□□ -1.38
VPS13B-201ENST00000355155 KRTAP19-5Q3LI72 72 aa6.41□□□□□ -1.38
VPS13B-201ENST00000355155 KRTAP4-8Q9BYQ9 185 aa6.41□□□□□ -1.38
VPS13B-201ENST00000355155 KRTAP19-7Q3SYF9 63 aa6.37□□□□□ -1.39
VPS13B-201ENST00000355155 KRTAP19-4Q3LI73 84 aa6.34□□□□□ -1.39
VPS13B-201ENST00000355155 FCGBPQ9Y6R7 5405 aaPredicted RBP6.27□□□□□ -1.41
VPS13B-201ENST00000355155 MT1EP04732 61 aa6.24□□□□□ -1.41
VPS13B-201ENST00000355155 KMT2DO14686 5537 aa6.18□□□□□ -1.42
VPS13B-201ENST00000355155 FSIP2Q5CZC0 6907 aa6.16□□□□□ -1.42
VPS13B-201ENST00000355155 KRTAP9-1A8MXZ3 250 aaPredicted RBP6.15□□□□□ -1.43
VPS13B-201ENST00000355155 MT1LQ93083 61 aa6.14□□□□□ -1.43
VPS13B-201ENST00000355155 LCE3CQ5T5A8 94 aa6.13□□□□□ -1.43
VPS13B-201ENST00000355155 KRTAP9-7A8MTY7 169 aa6.12□□□□□ -1.43
VPS13B-201ENST00000355155 LUZP6Q538Z0 58 aa6.03□□□□□ -1.44
VPS13B-201ENST00000355155 NDUFAF8A1L188 74 aa5.98□□□□□ -1.45
VPS13B-201ENST00000355155 KRTAP5-9P26371 169 aa5.98□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 7.2 ms