RNA–Protein interactions for RNA: ENST00000352818.8

CD44-205, Transcript of CD44 molecule (Indian blood group), humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CD44, Length 1,023 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-205ENST00000352818 FLGP20930 4061 aaPredicted RBP4.47□□□□□ -1.69
CD44-205ENST00000352818 SEC61GP60059 68 aa4.46□□□□□ -1.7
CD44-205ENST00000352818 TPRXLQ17RH7 258 aa4.46□□□□□ -1.7
CD44-205ENST00000352818 C20orf166-AS1Q96NR2 134 aa4.46□□□□□ -1.7
CD44-205ENST00000352818 V9GYY9 64 aa4.46□□□□□ -1.7
CD44-205ENST00000352818 A8MUU9 505 aa4.45□□□□□ -1.7
CD44-205ENST00000352818 KRTAP19-1Q8IUB9 90 aa4.44□□□□□ -1.7
CD44-205ENST00000352818 Q1T7F1 81 aa4.43□□□□□ -1.7
CD44-205ENST00000352818 COA5Q86WW8 74 aa4.43□□□□□ -1.7
CD44-205ENST00000352818 RETNLBQ9BQ08 111 aa4.43□□□□□ -1.7
CD44-205ENST00000352818 HRES1P13985 223 aa4.42□□□□□ -1.7
CD44-205ENST00000352818 DMAC1Q96GE9 116 aa4.42□□□□□ -1.7
CD44-205ENST00000352818 C7orf65Q6ZTY9 151 aa4.41□□□□□ -1.7
CD44-205ENST00000352818 KRTAP6-3Q3LI67 103 aa4.4□□□□□ -1.71
CD44-205ENST00000352818 Q75L30 129 aa4.4□□□□□ -1.71
CD44-205ENST00000352818 C9orf92A6NGG3 77 aa4.39□□□□□ -1.71
CD44-205ENST00000352818 ACYP2P14621 99 aa4.39□□□□□ -1.71
CD44-205ENST00000352818 IGKV2D-30A0A075B6S6 120 aa4.38□□□□□ -1.71
CD44-205ENST00000352818 LOC100996750A0A140TA64 210 aa4.38□□□□□ -1.71
CD44-205ENST00000352818 KRTAP4-6Q9BYQ5 205 aa4.38□□□□□ -1.71
CD44-205ENST00000352818 KRTAP20-1Q3LI63 56 aa4.37□□□□□ -1.71
CD44-205ENST00000352818 MPLKIPQ8TAP9 179 aa4.37□□□□□ -1.71
CD44-205ENST00000352818 H3BS24 57 aa4.36□□□□□ -1.71
CD44-205ENST00000352818 MUC12Q9UKN1 5478 aa4.36□□□□□ -1.71
CD44-205ENST00000352818 A8MUN3 132 aa4.35□□□□□ -1.71
CD44-205ENST00000352818 LINC01558Q9Y6Z2 57 aa4.33□□□□□ -1.72
CD44-205ENST00000352818 BRK1Q8WUW1 75 aa4.32□□□□□ -1.72
CD44-205ENST00000352818 RPL37P61927 97 aaKnown RBP4.31□□□□□ -1.72
CD44-205ENST00000352818 CHKB-CPT1BH3BT56 60 aa4.3□□□□□ -1.72
CD44-205ENST00000352818 PMAIP1Q13794 54 aa4.3□□□□□ -1.72
CD44-205ENST00000352818 XP32Q5T750 250 aa4.29□□□□□ -1.72
CD44-205ENST00000352818 SPINK7P58062 85 aa4.28□□□□□ -1.72
CD44-205ENST00000352818 Q5VV11 94 aa4.28□□□□□ -1.72
CD44-205ENST00000352818 ATP11AUNQ6ZP68 121 aa4.28□□□□□ -1.72
CD44-205ENST00000352818 M0R2T5 61 aa4.27□□□□□ -1.73
CD44-205ENST00000352818 PSPHP1O15172 72 aa4.27□□□□□ -1.73
CD44-205ENST00000352818 SEC61BP60468 96 aaKnown RBP4.27□□□□□ -1.73
CD44-205ENST00000352818 PRR15LQ9BU68 103 aa4.27□□□□□ -1.73
CD44-205ENST00000352818 COX6B2Q6YFQ2 88 aa4.24□□□□□ -1.73
CD44-205ENST00000352818 KRTAP9-8Q9BYQ0 159 aa4.24□□□□□ -1.73
CD44-205ENST00000352818 SPTSSBQ8NFR3 76 aa4.23□□□□□ -1.73
CD44-205ENST00000352818 KRTAP3-1Q9BYR8 98 aa4.22□□□□□ -1.73
CD44-205ENST00000352818 KMT2DO14686 5537 aa4.21□□□□□ -1.74
CD44-205ENST00000352818 GPR98Q8WXG9 6306 aa4.2□□□□□ -1.74
CD44-205ENST00000352818 KRTAP19-6Q3LI70 58 aa4.18□□□□□ -1.74
CD44-205ENST00000352818 A0A1B0GU69 56 aa4.17□□□□□ -1.74
CD44-205ENST00000352818 MDN1Q9NU22 5596 aa4.16□□□□□ -1.74
CD44-205ENST00000352818 A6NED7 52 aa4.16□□□□□ -1.74
CD44-205ENST00000352818 CDC42SE1Q9NRR8 79 aa4.15□□□□□ -1.75
CD44-205ENST00000352818 KRTAP9-3Q9BYQ3 159 aa4.13□□□□□ -1.75
CD44-205ENST00000352818 LCA10Q71F78 164 aa4.12□□□□□ -1.75
CD44-205ENST00000352818 KTN1-AS1Q86SY8 53 aa4.11□□□□□ -1.75
CD44-205ENST00000352818 UQCR11O14957 56 aa4.09□□□□□ -1.75
CD44-205ENST00000352818 H1FX-AS1Q4G0G2 97 aa4.09□□□□□ -1.75
CD44-205ENST00000352818 MT2AP02795 61 aa4.08□□□□□ -1.76
CD44-205ENST00000352818 SPATA8Q6RVD6 105 aa4.08□□□□□ -1.76
CD44-205ENST00000352818 RBM12B-AS1Q9P1G2 102 aa4.08□□□□□ -1.76
CD44-205ENST00000352818 S4R3F8 94 aa4.08□□□□□ -1.76
CD44-205ENST00000352818 A8MU10 97 aa4.07□□□□□ -1.76
CD44-205ENST00000352818 KRTAP2-3P0C7H8 128 aa4.07□□□□□ -1.76
CD44-205ENST00000352818 KRTAP2-4Q9BYR9 128 aa4.07□□□□□ -1.76
CD44-205ENST00000352818 MT1FP04733 61 aa4.06□□□□□ -1.76
CD44-205ENST00000352818 KRTAP4-8Q9BYQ9 185 aa4.06□□□□□ -1.76
CD44-205ENST00000352818 MIR22HGQ0VDD5 57 aa4.04□□□□□ -1.76
CD44-205ENST00000352818 A0A1B0GU33 70 aa4.01□□□□□ -1.77
CD44-205ENST00000352818 A6NN06 94 aa4□□□□□ -1.77
CD44-205ENST00000352818 H0YAA0 97 aa3.98□□□□□ -1.77
CD44-205ENST00000352818 CSAG1Q6PB30 78 aa3.96□□□□□ -1.78
CD44-205ENST00000352818 KRTAP5-9P26371 169 aa3.95□□□□□ -1.78
CD44-205ENST00000352818 KRTAP4-12Q9BQ66 201 aa3.93□□□□□ -1.78
CD44-205ENST00000352818 KRTAP10-10P60014 251 aa3.92□□□□□ -1.78
CD44-205ENST00000352818 KRTAP2-2Q9BYT5 123 aa3.9□□□□□ -1.79
CD44-205ENST00000352818 KRTAP2-1Q9BYU5 128 aa3.9□□□□□ -1.79
CD44-205ENST00000352818 P0C880 135 aa3.89□□□□□ -1.79
CD44-205ENST00000352818 ADM2Q7Z4H4 148 aa3.89□□□□□ -1.79
CD44-205ENST00000352818 LCE3BQ5TA77 95 aa3.88□□□□□ -1.79
CD44-205ENST00000352818 KRTAP13-4Q3LI77 160 aa3.87□□□□□ -1.79
CD44-205ENST00000352818 LINC01554Q52M75 96 aa3.86□□□□□ -1.79
CD44-205ENST00000352818 K7ERS5 55 aa3.85□□□□□ -1.79
CD44-205ENST00000352818 M0QZ58 72 aa3.85□□□□□ -1.79
CD44-205ENST00000352818 KRTAP9-9Q9BYP9 154 aa3.78□□□□□ -1.8
CD44-205ENST00000352818 KRTAP9-4Q9BYQ2 154 aa3.78□□□□□ -1.8
CD44-205ENST00000352818 A0A0D9SG42 100 aa3.77□□□□□ -1.81
CD44-205ENST00000352818 KRTAP12-1P59990 96 aa3.75□□□□□ -1.81
CD44-205ENST00000352818 R4GN34 69 aa3.75□□□□□ -1.81
CD44-205ENST00000352818 SPRR2EP22531 72 aa3.73□□□□□ -1.81
CD44-205ENST00000352818 SPRR2BP35325 72 aa3.73□□□□□ -1.81
CD44-205ENST00000352818 SPRR2AP35326 72 aa3.73□□□□□ -1.81
CD44-205ENST00000352818 KRTAP12-2P59991 146 aa3.72□□□□□ -1.81
CD44-205ENST00000352818 PRAC1Q96KF2 57 aa3.72□□□□□ -1.81
CD44-205ENST00000352818 CRIPTQ9P021 101 aa3.72□□□□□ -1.81
CD44-205ENST00000352818 KRTAP4-8A0A0G2JLE6 195 aa3.71□□□□□ -1.82
CD44-205ENST00000352818 ROMO1P60602 79 aa3.71□□□□□ -1.82
CD44-205ENST00000352818 KRTAP23-1A1A580 65 aa3.7□□□□□ -1.82
CD44-205ENST00000352818 KRTAP19-4Q3LI73 84 aa3.68□□□□□ -1.82
CD44-205ENST00000352818 SPINT4Q6UDR6 99 aa3.67□□□□□ -1.82
CD44-205ENST00000352818 LCE1AQ5T7P2 110 aa3.65□□□□□ -1.83
CD44-205ENST00000352818 KRTAP25-1Q3LHN0 102 aa3.64□□□□□ -1.83
CD44-205ENST00000352818 A0A0A0MQY5 61 aa3.63□□□□□ -1.83
CD44-205ENST00000352818 LCE1DQ5T752 114 aa3.63□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 7.6 ms