RNA–Protein interactions for RNA: ENST00000348639.7

CHRNA3-202, Transcript of cholinergic receptor nicotinic alpha 3 subunit, humanhuman

TSL 1 (best) BASIC

Gene CHRNA3, Length 2,030 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA3-202ENST00000348639 PCLOQ9Y6V0 5065 aa10.52□□□□□ -0.72
CHRNA3-202ENST00000348639 SEC61GP60059 68 aa10.5□□□□□ -0.73
CHRNA3-202ENST00000348639 UQCR11O14957 56 aa10.46□□□□□ -0.73
CHRNA3-202ENST00000348639 J3QL48 77 aa10.46□□□□□ -0.74
CHRNA3-202ENST00000348639 PMAIP1Q13794 54 aa10.43□□□□□ -0.74
CHRNA3-202ENST00000348639 LPAP08519 4548 aa10.43□□□□□ -0.74
CHRNA3-202ENST00000348639 SPATA8Q6RVD6 105 aa10.43□□□□□ -0.74
CHRNA3-202ENST00000348639 LRP2P98164 4655 aa10.41□□□□□ -0.74
CHRNA3-202ENST00000348639 MIR22HGQ0VDD5 57 aa10.39□□□□□ -0.75
CHRNA3-202ENST00000348639 KRTAP3-3Q9BYR6 98 aa10.31□□□□□ -0.76
CHRNA3-202ENST00000348639 A6NN06 94 aa10.31□□□□□ -0.76
CHRNA3-202ENST00000348639 S4R3F8 94 aa10.29□□□□□ -0.76
CHRNA3-202ENST00000348639 H1FX-AS1Q4G0G2 97 aa10.25□□□□□ -0.77
CHRNA3-202ENST00000348639 A0A1B0GU33 70 aa10.24□□□□□ -0.77
CHRNA3-202ENST00000348639 HERC1Q15751 4861 aa10.21□□□□□ -0.77
CHRNA3-202ENST00000348639 RBM12B-AS1Q9P1G2 102 aa10.2□□□□□ -0.78
CHRNA3-202ENST00000348639 H0YAA0 97 aa10.17□□□□□ -0.78
CHRNA3-202ENST00000348639 SEC61BP60468 96 aaKnown RBP10.17□□□□□ -0.78
CHRNA3-202ENST00000348639 KTN1-AS1Q86SY8 53 aa10.13□□□□□ -0.79
CHRNA3-202ENST00000348639 KRTAP10-6P60371 365 aaPredicted RBP10.09□□□□□ -0.79
CHRNA3-202ENST00000348639 KRTAP3-2Q9BYR7 98 aa10.06□□□□□ -0.8
CHRNA3-202ENST00000348639 CSAG1Q6PB30 78 aa10□□□□□ -0.81
CHRNA3-202ENST00000348639 KRTAP4-1Q9BYQ7 146 aa10□□□□□ -0.81
CHRNA3-202ENST00000348639 HMCN2Q8NDA2 5059 aa9.99□□□□□ -0.81
CHRNA3-202ENST00000348639 MUC17Q685J3 4493 aa9.96□□□□□ -0.82
CHRNA3-202ENST00000348639 P0C880 135 aa9.94□□□□□ -0.82
CHRNA3-202ENST00000348639 ADM2Q7Z4H4 148 aa9.9□□□□□ -0.82
CHRNA3-202ENST00000348639 KRTAP13-4Q3LI77 160 aa9.89□□□□□ -0.83
CHRNA3-202ENST00000348639 K7ERS5 55 aa9.81□□□□□ -0.84
CHRNA3-202ENST00000348639 MUC2Q02817 5179 aa9.79□□□□□ -0.84
CHRNA3-202ENST00000348639 KRTAP19-2Q3LHN2 52 aa9.77□□□□□ -0.85
CHRNA3-202ENST00000348639 A0A0D9SG42 100 aa9.75□□□□□ -0.85
CHRNA3-202ENST00000348639 PRAC1Q96KF2 57 aa9.74□□□□□ -0.85
CHRNA3-202ENST00000348639 M0QZ58 72 aa9.69□□□□□ -0.86
CHRNA3-202ENST00000348639 UBR4Q5T4S7 5183 aa9.61□□□□□ -0.87
CHRNA3-202ENST00000348639 KRTAP12-2P59991 146 aa9.55□□□□□ -0.88
CHRNA3-202ENST00000348639 KRTAP12-1P59990 96 aa9.53□□□□□ -0.88
CHRNA3-202ENST00000348639 R4GN34 69 aa9.51□□□□□ -0.89
CHRNA3-202ENST00000348639 ROMO1P60602 79 aa9.5□□□□□ -0.89
CHRNA3-202ENST00000348639 FLGP20930 4061 aaPredicted RBP9.49□□□□□ -0.89
CHRNA3-202ENST00000348639 SPINT4Q6UDR6 99 aa9.47□□□□□ -0.89
CHRNA3-202ENST00000348639 LORP23490 312 aaPredicted RBP9.44□□□□□ -0.9
CHRNA3-202ENST00000348639 RNF213Q63HN8 5207 aa9.43□□□□□ -0.9
CHRNA3-202ENST00000348639 LINC01554Q52M75 96 aa9.41□□□□□ -0.9
CHRNA3-202ENST00000348639 KRTAP25-1Q3LHN0 102 aa9.38□□□□□ -0.91
CHRNA3-202ENST00000348639 LCE2CQ5TA81 110 aa9.36□□□□□ -0.91
CHRNA3-202ENST00000348639 FAT4Q6V0I7 4981 aa9.3□□□□□ -0.92
CHRNA3-202ENST00000348639 CRIPTQ9P021 101 aa9.29□□□□□ -0.92
CHRNA3-202ENST00000348639 M0R2T5 61 aa9.21□□□□□ -0.93
CHRNA3-202ENST00000348639 MT1HP80294 61 aa9.17□□□□□ -0.94
CHRNA3-202ENST00000348639 C10orf95Q9H7T3 257 aa9.06□□□□□ -0.96
CHRNA3-202ENST00000348639 CAMK2N1Q7Z7J9 78 aa8.96□□□□□ -0.98
CHRNA3-202ENST00000348639 SPRR2GQ9BYE4 73 aa8.93□□□□□ -0.98
CHRNA3-202ENST00000348639 MT2AP02795 61 aa8.89□□□□□ -0.99
CHRNA3-202ENST00000348639 KRTAP10-10P60014 251 aa8.89□□□□□ -0.99
CHRNA3-202ENST00000348639 MT1FP04733 61 aa8.87□□□□□ -0.99
CHRNA3-202ENST00000348639 KRTAP19-1Q8IUB9 90 aa8.87□□□□□ -0.99
CHRNA3-202ENST00000348639 KRTAP9-8Q9BYQ0 159 aa8.87□□□□□ -0.99
CHRNA3-202ENST00000348639 LCE2AQ5TA79 106 aaPredicted RBP8.76□□□□□ -1.01
CHRNA3-202ENST00000348639 PLAC4Q8WY50 150 aa8.73□□□□□ -1.01
CHRNA3-202ENST00000348639 KRTAP19-8Q3LI54 63 aa8.61□□□□□ -1.03
CHRNA3-202ENST00000348639 PP632Q6XCG6 107 aa8.61□□□□□ -1.03
CHRNA3-202ENST00000348639 TNP1P09430 55 aa8.61□□□□□ -1.03
CHRNA3-202ENST00000348639 KRTAP9-3Q9BYQ3 159 aa8.52□□□□□ -1.05
CHRNA3-202ENST00000348639 KRTAP23-1A1A580 65 aa8.47□□□□□ -1.05
CHRNA3-202ENST00000348639 MT1BP07438 61 aa8.47□□□□□ -1.05
CHRNA3-202ENST00000348639 KRTAP15-1Q3LI76 137 aa8.44□□□□□ -1.06
CHRNA3-202ENST00000348639 KRTAP10-5P60370 271 aa8.32□□□□□ -1.08
CHRNA3-202ENST00000348639 MT1XP80297 61 aa8.32□□□□□ -1.08
CHRNA3-202ENST00000348639 LCE2BO14633 110 aa8.27□□□□□ -1.09
CHRNA3-202ENST00000348639 LCE3AQ5TA76 89 aa8.17□□□□□ -1.1
CHRNA3-202ENST00000348639 PRO2289Q9P1D8 64 aa8.13□□□□□ -1.11
CHRNA3-202ENST00000348639 USH2AO75445 5202 aa8.09□□□□□ -1.11
CHRNA3-202ENST00000348639 KRTAP10-12P60413 245 aa8.03□□□□□ -1.12
CHRNA3-202ENST00000348639 KRTAP10-7P60409 375 aaPredicted RBP8.02□□□□□ -1.13
CHRNA3-202ENST00000348639 KRTAP8-1Q8IUC2 63 aa8.02□□□□□ -1.13
CHRNA3-202ENST00000348639 NDUFAF8A1L188 74 aa8□□□□□ -1.13
CHRNA3-202ENST00000348639 LCE2DQ5TA82 110 aaPredicted RBP8□□□□□ -1.13
CHRNA3-202ENST00000348639 FSIP2Q5CZC0 6907 aa7.94□□□□□ -1.14
CHRNA3-202ENST00000348639 KRTAP9-2Q9BYQ4 174 aa7.88□□□□□ -1.15
CHRNA3-202ENST00000348639 SPRR5A0A1B0GTR4 108 aa7.85□□□□□ -1.15
CHRNA3-202ENST00000348639 KRTAP12-3P60328 96 aa7.83□□□□□ -1.16
CHRNA3-202ENST00000348639 LUZP6Q538Z0 58 aa7.81□□□□□ -1.16
CHRNA3-202ENST00000348639 H3BS24 57 aa7.8□□□□□ -1.16
CHRNA3-202ENST00000348639 SSPOA2VEC9 5147 aa7.8□□□□□ -1.16
CHRNA3-202ENST00000348639 KMT2DO14686 5537 aa7.7□□□□□ -1.18
CHRNA3-202ENST00000348639 KRTAP4-8A0A0G2JLE6 195 aa7.64□□□□□ -1.19
CHRNA3-202ENST00000348639 KRTAP4-8Q9BYQ9 185 aa7.64□□□□□ -1.19
CHRNA3-202ENST00000348639 KRTAP19-5Q3LI72 72 aa7.62□□□□□ -1.19
CHRNA3-202ENST00000348639 KRTAP19-6Q3LI70 58 aa7.61□□□□□ -1.19
CHRNA3-202ENST00000348639 CRCT1Q9UGL9 99 aa7.54□□□□□ -1.2
CHRNA3-202ENST00000348639 FCGBPQ9Y6R7 5405 aaPredicted RBP7.48□□□□□ -1.21
CHRNA3-202ENST00000348639 KRTAP19-7Q3SYF9 63 aa7.41□□□□□ -1.22
CHRNA3-202ENST00000348639 LCE3CQ5T5A8 94 aa7.35□□□□□ -1.23
CHRNA3-202ENST00000348639 KRTAP9-6A0A140TA67 174 aa7.34□□□□□ -1.23
CHRNA3-202ENST00000348639 MT1EP04732 61 aa7.24□□□□□ -1.25
CHRNA3-202ENST00000348639 MACF1Q9UPN3 7388 aaKnown RBP7.21□□□□□ -1.25
CHRNA3-202ENST00000348639 KRTAP19-4Q3LI73 84 aa7.21□□□□□ -1.26
CHRNA3-202ENST00000348639 MT1LQ93083 61 aa7.17□□□□□ -1.26
CHRNA3-202ENST00000348639 A0A0A0MQY5 61 aa7.1□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms