RNA–Protein interactions for RNA: ENST00000346213.8

RAB5C-201, Transcript of RAB5C, member RAS oncogene family, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAB5C, Length 1,671 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5C-201ENST00000346213 ATP11AUNQ6ZP68 121 aa8.46□□□□□ -1.05
RAB5C-201ENST00000346213 PSPHP1O15172 72 aa8.46□□□□□ -1.06
RAB5C-201ENST00000346213 FLGP20930 4061 aaPredicted RBP8.44□□□□□ -1.06
RAB5C-201ENST00000346213 Q5VV11 94 aa8.44□□□□□ -1.06
RAB5C-201ENST00000346213 LOC101927531A0A1B0GV80 90 aa8.43□□□□□ -1.06
RAB5C-201ENST00000346213 A8MUN3 132 aa8.43□□□□□ -1.06
RAB5C-201ENST00000346213 Q75L30 129 aa8.4□□□□□ -1.06
RAB5C-201ENST00000346213 CHKB-CPT1BH3BT56 60 aa8.37□□□□□ -1.07
RAB5C-201ENST00000346213 A8MUU9 505 aa8.35□□□□□ -1.07
RAB5C-201ENST00000346213 C20orf166-AS1Q96NR2 134 aa8.35□□□□□ -1.07
RAB5C-201ENST00000346213 RBM12B-AS1Q9P1G2 102 aa8.34□□□□□ -1.07
RAB5C-201ENST00000346213 IGKV2-30P06310 120 aa8.34□□□□□ -1.08
RAB5C-201ENST00000346213 CDC42SE1Q9NRR8 79 aa8.32□□□□□ -1.08
RAB5C-201ENST00000346213 PRR15LQ9BU68 103 aa8.31□□□□□ -1.08
RAB5C-201ENST00000346213 A6NN06 94 aa8.3□□□□□ -1.08
RAB5C-201ENST00000346213 LORP23490 312 aaPredicted RBP8.29□□□□□ -1.08
RAB5C-201ENST00000346213 C7orf65Q6ZTY9 151 aa8.29□□□□□ -1.08
RAB5C-201ENST00000346213 A6NED7 52 aa8.27□□□□□ -1.09
RAB5C-201ENST00000346213 KRTAP10-6P60371 365 aaPredicted RBP8.27□□□□□ -1.09
RAB5C-201ENST00000346213 LINC01558Q9Y6Z2 57 aa8.24□□□□□ -1.09
RAB5C-201ENST00000346213 LCA10Q71F78 164 aa8.24□□□□□ -1.09
RAB5C-201ENST00000346213 IGKV2D-30A0A075B6S6 120 aa8.23□□□□□ -1.09
RAB5C-201ENST00000346213 SPTSSBQ8NFR3 76 aa8.23□□□□□ -1.09
RAB5C-201ENST00000346213 HRES1P13985 223 aa8.22□□□□□ -1.09
RAB5C-201ENST00000346213 COA5Q86WW8 74 aa8.21□□□□□ -1.09
RAB5C-201ENST00000346213 COX6B2Q6YFQ2 88 aa8.2□□□□□ -1.1
RAB5C-201ENST00000346213 KRTAP9-6A0A140TA67 174 aa8.17□□□□□ -1.1
RAB5C-201ENST00000346213 A8MU10 97 aa8.15□□□□□ -1.1
RAB5C-201ENST00000346213 FSIP2Q5CZC0 6907 aa8.14□□□□□ -1.11
RAB5C-201ENST00000346213 DMAC1Q96GE9 116 aa8.13□□□□□ -1.11
RAB5C-201ENST00000346213 M0R2T5 61 aa8.12□□□□□ -1.11
RAB5C-201ENST00000346213 ACYP2P14621 99 aa8.11□□□□□ -1.11
RAB5C-201ENST00000346213 SPINK7P58062 85 aa8.08□□□□□ -1.12
RAB5C-201ENST00000346213 KRTAP9-8Q9BYQ0 159 aa8.05□□□□□ -1.12
RAB5C-201ENST00000346213 CRCT1Q9UGL9 99 aa8.01□□□□□ -1.13
RAB5C-201ENST00000346213 MT2AP02795 61 aa7.92□□□□□ -1.14
RAB5C-201ENST00000346213 KRTAP3-1Q9BYR8 98 aa7.92□□□□□ -1.14
RAB5C-201ENST00000346213 LINC01554Q52M75 96 aa7.92□□□□□ -1.14
RAB5C-201ENST00000346213 USH2AO75445 5202 aa7.91□□□□□ -1.14
RAB5C-201ENST00000346213 MT1FP04733 61 aa7.89□□□□□ -1.15
RAB5C-201ENST00000346213 SPATA8Q6RVD6 105 aa7.86□□□□□ -1.15
RAB5C-201ENST00000346213 SSPOA2VEC9 5147 aa7.83□□□□□ -1.16
RAB5C-201ENST00000346213 KRTAP4-8Q9BYQ9 185 aa7.83□□□□□ -1.16
RAB5C-201ENST00000346213 KRTAP9-3Q9BYQ3 159 aa7.78□□□□□ -1.16
RAB5C-201ENST00000346213 A0A1B0GU69 56 aa7.76□□□□□ -1.17
RAB5C-201ENST00000346213 UQCR11O14957 56 aa7.75□□□□□ -1.17
RAB5C-201ENST00000346213 PRAC1Q96KF2 57 aa7.74□□□□□ -1.17
RAB5C-201ENST00000346213 H3BS24 57 aa7.72□□□□□ -1.17
RAB5C-201ENST00000346213 MIR22HGQ0VDD5 57 aa7.72□□□□□ -1.17
RAB5C-201ENST00000346213 KRTAP9-1A8MXZ3 250 aaPredicted RBP7.7□□□□□ -1.18
RAB5C-201ENST00000346213 KRTAP10-10P60014 251 aa7.7□□□□□ -1.18
RAB5C-201ENST00000346213 H1FX-AS1Q4G0G2 97 aa7.67□□□□□ -1.18
RAB5C-201ENST00000346213 S4R3F8 94 aa7.64□□□□□ -1.19
RAB5C-201ENST00000346213 ADM2Q7Z4H4 148 aa7.63□□□□□ -1.19
RAB5C-201ENST00000346213 FCGBPQ9Y6R7 5405 aaPredicted RBP7.62□□□□□ -1.19
RAB5C-201ENST00000346213 KRTAP19-1Q8IUB9 90 aa7.57□□□□□ -1.2
RAB5C-201ENST00000346213 CSAG1Q6PB30 78 aa7.56□□□□□ -1.2
RAB5C-201ENST00000346213 KRTAP25-1Q3LHN0 102 aa7.43□□□□□ -1.22
RAB5C-201ENST00000346213 A0A1B0GU33 70 aa7.41□□□□□ -1.22
RAB5C-201ENST00000346213 KRTAP19-6Q3LI70 58 aa7.4□□□□□ -1.23
RAB5C-201ENST00000346213 ROMO1P60602 79 aa7.38□□□□□ -1.23
RAB5C-201ENST00000346213 LCE3BQ5TA77 95 aa7.38□□□□□ -1.23
RAB5C-201ENST00000346213 KRTAP4-12Q9BQ66 201 aa7.36□□□□□ -1.23
RAB5C-201ENST00000346213 KRTAP9-7A8MTY7 169 aa7.35□□□□□ -1.23
RAB5C-201ENST00000346213 H0YAA0 97 aa7.34□□□□□ -1.23
RAB5C-201ENST00000346213 P0C880 135 aa7.3□□□□□ -1.24
RAB5C-201ENST00000346213 KRTAP9-9Q9BYP9 154 aa7.3□□□□□ -1.24
RAB5C-201ENST00000346213 KRTAP9-4Q9BYQ2 154 aa7.3□□□□□ -1.24
RAB5C-201ENST00000346213 MACF1Q9UPN3 7388 aaKnown RBP7.29□□□□□ -1.24
RAB5C-201ENST00000346213 K7ERS5 55 aa7.27□□□□□ -1.25
RAB5C-201ENST00000346213 MT1BP07438 61 aa7.26□□□□□ -1.25
RAB5C-201ENST00000346213 KRTAP4-8A0A0G2JLE6 195 aa7.25□□□□□ -1.25
RAB5C-201ENST00000346213 SYNE2Q8WXH0 6885 aaKnown RBP7.21□□□□□ -1.26
RAB5C-201ENST00000346213 KRTAP13-4Q3LI77 160 aa7.21□□□□□ -1.26
RAB5C-201ENST00000346213 SPRR2GQ9BYE4 73 aa7.2□□□□□ -1.26
RAB5C-201ENST00000346213 KRTAP19-8Q3LI54 63 aa7.18□□□□□ -1.26
RAB5C-201ENST00000346213 M0QZ58 72 aa7.15□□□□□ -1.27
RAB5C-201ENST00000346213 A0A0D9SG42 100 aa7.06□□□□□ -1.28
RAB5C-201ENST00000346213 R4GN34 69 aa7.05□□□□□ -1.28
RAB5C-201ENST00000346213 KRTAP4-7Q9BYR0 210 aa7.01□□□□□ -1.29
RAB5C-201ENST00000346213 KRTAP10-5P60370 271 aa7□□□□□ -1.29
RAB5C-201ENST00000346213 KRTAP6-3Q3LI67 103 aa6.96□□□□□ -1.29
RAB5C-201ENST00000346213 CRIPTQ9P021 101 aa6.96□□□□□ -1.3
RAB5C-201ENST00000346213 KRTAP12-1P59990 96 aa6.95□□□□□ -1.3
RAB5C-201ENST00000346213 SPINT4Q6UDR6 99 aa6.93□□□□□ -1.3
RAB5C-201ENST00000346213 KRTAP12-2P59991 146 aa6.93□□□□□ -1.3
RAB5C-201ENST00000346213 LCE1DQ5T752 114 aa6.92□□□□□ -1.3
RAB5C-201ENST00000346213 KRTAP15-1Q3LI76 137 aa6.85□□□□□ -1.31
RAB5C-201ENST00000346213 MUC12Q9UKN1 5478 aa6.83□□□□□ -1.32
RAB5C-201ENST00000346213 MT1XP80297 61 aa6.81□□□□□ -1.32
RAB5C-201ENST00000346213 KRTAP4-9Q9BYQ8 210 aa6.78□□□□□ -1.32
RAB5C-201ENST00000346213 KMT2DO14686 5537 aa6.78□□□□□ -1.32
RAB5C-201ENST00000346213 NEBP20929 6669 aa6.77□□□□□ -1.33
RAB5C-201ENST00000346213 NDUFAF8A1L188 74 aa6.76□□□□□ -1.33
RAB5C-201ENST00000346213 KRTAP4-2Q9BYR5 136 aa6.74□□□□□ -1.33
RAB5C-201ENST00000346213 KRTAP5-9P26371 169 aa6.71□□□□□ -1.33
RAB5C-201ENST00000346213 MDN1Q9NU22 5596 aa6.7□□□□□ -1.34
RAB5C-201ENST00000346213 CAMK2N1Q7Z7J9 78 aa6.61□□□□□ -1.35
RAB5C-201ENST00000346213 PLAC4Q8WY50 150 aa6.6□□□□□ -1.35
RAB5C-201ENST00000346213 C10orf95Q9H7T3 257 aa6.57□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms