RNA–Protein interactions for RNA: ENST00000344548.7

CDC42-202, Transcript of cell division cycle 42, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CDC42, Length 2,256 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42-202ENST00000344548 MUC17Q685J3 4493 aa6.9□□□□□ -1.31
CDC42-202ENST00000344548 MUC2Q02817 5179 aa6.88□□□□□ -1.31
CDC42-202ENST00000344548 SEC61BP60468 96 aaKnown RBP6.84□□□□□ -1.31
CDC42-202ENST00000344548 LINC01558Q9Y6Z2 57 aa6.84□□□□□ -1.31
CDC42-202ENST00000344548 PRR15LQ9BU68 103 aa6.83□□□□□ -1.32
CDC42-202ENST00000344548 Q5VV11 94 aa6.82□□□□□ -1.32
CDC42-202ENST00000344548 KRTAP3-3Q9BYR6 98 aa6.8□□□□□ -1.32
CDC42-202ENST00000344548 LCA10Q71F78 164 aa6.78□□□□□ -1.32
CDC42-202ENST00000344548 H1FX-AS1Q4G0G2 97 aa6.74□□□□□ -1.33
CDC42-202ENST00000344548 KRTAP19-2Q3LHN2 52 aa6.73□□□□□ -1.33
CDC42-202ENST00000344548 RBM12B-AS1Q9P1G2 102 aa6.73□□□□□ -1.33
CDC42-202ENST00000344548 S4R3F8 94 aa6.71□□□□□ -1.34
CDC42-202ENST00000344548 A8MU10 97 aa6.7□□□□□ -1.34
CDC42-202ENST00000344548 A0A1B0GU69 56 aa6.7□□□□□ -1.34
CDC42-202ENST00000344548 KRTAP3-2Q9BYR7 98 aa6.7□□□□□ -1.34
CDC42-202ENST00000344548 UBR4Q5T4S7 5183 aa6.69□□□□□ -1.34
CDC42-202ENST00000344548 LCE2DQ5TA82 110 aaPredicted RBP6.66□□□□□ -1.34
CDC42-202ENST00000344548 SPTSSBQ8NFR3 76 aa6.66□□□□□ -1.34
CDC42-202ENST00000344548 H3BS24 57 aa6.66□□□□□ -1.34
CDC42-202ENST00000344548 KTN1-AS1Q86SY8 53 aa6.64□□□□□ -1.35
CDC42-202ENST00000344548 RNF213Q63HN8 5207 aa6.62□□□□□ -1.35
CDC42-202ENST00000344548 A6NED7 52 aa6.61□□□□□ -1.35
CDC42-202ENST00000344548 FAT4Q6V0I7 4981 aa6.58□□□□□ -1.36
CDC42-202ENST00000344548 KRTAP10-6P60371 365 aaPredicted RBP6.57□□□□□ -1.36
CDC42-202ENST00000344548 CSAG1Q6PB30 78 aa6.53□□□□□ -1.36
CDC42-202ENST00000344548 P0C880 135 aa6.52□□□□□ -1.37
CDC42-202ENST00000344548 LCE2CQ5TA81 110 aa6.52□□□□□ -1.37
CDC42-202ENST00000344548 FLGP20930 4061 aaPredicted RBP6.51□□□□□ -1.37
CDC42-202ENST00000344548 UQCR11O14957 56 aa6.49□□□□□ -1.37
CDC42-202ENST00000344548 CDC42SE1Q9NRR8 79 aa6.49□□□□□ -1.37
CDC42-202ENST00000344548 A0A1B0GU33 70 aa6.48□□□□□ -1.37
CDC42-202ENST00000344548 ADM2Q7Z4H4 148 aa6.48□□□□□ -1.37
CDC42-202ENST00000344548 H0YAA0 97 aa6.47□□□□□ -1.37
CDC42-202ENST00000344548 SPATA8Q6RVD6 105 aa6.47□□□□□ -1.37
CDC42-202ENST00000344548 MIR22HGQ0VDD5 57 aa6.46□□□□□ -1.38
CDC42-202ENST00000344548 KRTAP13-4Q3LI77 160 aa6.45□□□□□ -1.38
CDC42-202ENST00000344548 LORP23490 312 aaPredicted RBP6.37□□□□□ -1.39
CDC42-202ENST00000344548 A6NN06 94 aa6.37□□□□□ -1.39
CDC42-202ENST00000344548 MT1HP80294 61 aa6.34□□□□□ -1.39
CDC42-202ENST00000344548 A0A0D9SG42 100 aa6.29□□□□□ -1.4
CDC42-202ENST00000344548 LINC01554Q52M75 96 aa6.25□□□□□ -1.41
CDC42-202ENST00000344548 M0R2T5 61 aa6.23□□□□□ -1.41
CDC42-202ENST00000344548 M0QZ58 72 aa6.22□□□□□ -1.41
CDC42-202ENST00000344548 R4GN34 69 aa6.19□□□□□ -1.42
CDC42-202ENST00000344548 KRTAP12-2P59991 146 aa6.17□□□□□ -1.42
CDC42-202ENST00000344548 KRTAP9-8Q9BYQ0 159 aa6.15□□□□□ -1.43
CDC42-202ENST00000344548 KRTAP12-1P59990 96 aa6.14□□□□□ -1.43
CDC42-202ENST00000344548 MT2AP02795 61 aa6.12□□□□□ -1.43
CDC42-202ENST00000344548 MT1FP04733 61 aa6.11□□□□□ -1.43
CDC42-202ENST00000344548 SPINT4Q6UDR6 99 aa6.1□□□□□ -1.43
CDC42-202ENST00000344548 A0A0A0MQY5 61 aa6.06□□□□□ -1.44
CDC42-202ENST00000344548 KRTAP19-1Q8IUB9 90 aa6.04□□□□□ -1.44
CDC42-202ENST00000344548 KRTAP10-10P60014 251 aa6.04□□□□□ -1.44
CDC42-202ENST00000344548 K7ERS5 55 aa6.02□□□□□ -1.44
CDC42-202ENST00000344548 LCE2AQ5TA79 106 aaPredicted RBP6.02□□□□□ -1.44
CDC42-202ENST00000344548 CRIPTQ9P021 101 aa6.01□□□□□ -1.45
CDC42-202ENST00000344548 PRAC1Q96KF2 57 aa6□□□□□ -1.45
CDC42-202ENST00000344548 SPRR2GQ9BYE4 73 aa5.99□□□□□ -1.45
CDC42-202ENST00000344548 KRTAP9-3Q9BYQ3 159 aa5.9□□□□□ -1.46
CDC42-202ENST00000344548 ROMO1P60602 79 aa5.89□□□□□ -1.47
CDC42-202ENST00000344548 C10orf95Q9H7T3 257 aa5.83□□□□□ -1.48
CDC42-202ENST00000344548 LCE2BO14633 110 aa5.82□□□□□ -1.48
CDC42-202ENST00000344548 KRTAP19-8Q3LI54 63 aa5.81□□□□□ -1.48
CDC42-202ENST00000344548 CAMK2N1Q7Z7J9 78 aa5.81□□□□□ -1.48
CDC42-202ENST00000344548 MT1BP07438 61 aa5.8□□□□□ -1.48
CDC42-202ENST00000344548 PLAC4Q8WY50 150 aa5.74□□□□□ -1.49
CDC42-202ENST00000344548 USH2AO75445 5202 aa5.73□□□□□ -1.49
CDC42-202ENST00000344548 KRTAP25-1Q3LHN0 102 aa5.69□□□□□ -1.5
CDC42-202ENST00000344548 KRTAP10-5P60370 271 aa5.63□□□□□ -1.51
CDC42-202ENST00000344548 MT1XP80297 61 aa5.63□□□□□ -1.51
CDC42-202ENST00000344548 FSIP2Q5CZC0 6907 aa5.54□□□□□ -1.52
CDC42-202ENST00000344548 TNP1P09430 55 aa5.51□□□□□ -1.53
CDC42-202ENST00000344548 KRTAP10-7P60409 375 aaPredicted RBP5.45□□□□□ -1.54
CDC42-202ENST00000344548 SSPOA2VEC9 5147 aa5.44□□□□□ -1.54
CDC42-202ENST00000344548 LUZP6Q538Z0 58 aa5.41□□□□□ -1.54
CDC42-202ENST00000344548 NDUFAF8A1L188 74 aa5.4□□□□□ -1.54
CDC42-202ENST00000344548 PRO2289Q9P1D8 64 aa5.39□□□□□ -1.55
CDC42-202ENST00000344548 LCE3AQ5TA76 89 aa5.38□□□□□ -1.55
CDC42-202ENST00000344548 KMT2DO14686 5537 aa5.35□□□□□ -1.55
CDC42-202ENST00000344548 PP632Q6XCG6 107 aa5.34□□□□□ -1.56
CDC42-202ENST00000344548 KRTAP23-1A1A580 65 aa5.3□□□□□ -1.56
CDC42-202ENST00000344548 KRTAP10-12P60413 245 aa5.3□□□□□ -1.56
CDC42-202ENST00000344548 KRTAP19-6Q3LI70 58 aa5.29□□□□□ -1.56
CDC42-202ENST00000344548 KRTAP15-1Q3LI76 137 aa5.29□□□□□ -1.56
CDC42-202ENST00000344548 KRTAP4-8A0A0G2JLE6 195 aa5.26□□□□□ -1.57
CDC42-202ENST00000344548 KRTAP4-8Q9BYQ9 185 aa5.26□□□□□ -1.57
CDC42-202ENST00000344548 KRTAP8-1Q8IUC2 63 aa5.21□□□□□ -1.58
CDC42-202ENST00000344548 FCGBPQ9Y6R7 5405 aaPredicted RBP5.18□□□□□ -1.58
CDC42-202ENST00000344548 KRTAP9-2Q9BYQ4 174 aa5.17□□□□□ -1.58
CDC42-202ENST00000344548 KRTAP12-3P60328 96 aa5.11□□□□□ -1.59
CDC42-202ENST00000344548 KRTAP19-5Q3LI72 72 aa5.11□□□□□ -1.59
CDC42-202ENST00000344548 KRTAP19-7Q3SYF9 63 aa5.03□□□□□ -1.6
CDC42-202ENST00000344548 MACF1Q9UPN3 7388 aaKnown RBP4.98□□□□□ -1.61
CDC42-202ENST00000344548 CRCT1Q9UGL9 99 aa4.97□□□□□ -1.61
CDC42-202ENST00000344548 MT1EP04732 61 aa4.9□□□□□ -1.63
CDC42-202ENST00000344548 SYNE2Q8WXH0 6885 aaKnown RBP4.88□□□□□ -1.63
CDC42-202ENST00000344548 SPRR5A0A1B0GTR4 108 aa4.88□□□□□ -1.63
CDC42-202ENST00000344548 MUC12Q9UKN1 5478 aa4.86□□□□□ -1.63
CDC42-202ENST00000344548 MT1LQ93083 61 aa4.82□□□□□ -1.64
CDC42-202ENST00000344548 KRTAP4-7Q9BYR0 210 aa4.82□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms