RNA–Protein interactions for RNA: ENST00000342782.3

DUSP9-201, Transcript of dual specificity phosphatase 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DUSP9, Length 2,433 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DUSP9-201ENST00000342782 ADM2Q7Z4H4 148 aa11.73□□□□□ -0.53
DUSP9-201ENST00000342782 IGKV2D-30A0A075B6S6 120 aa11.72□□□□□ -0.53
DUSP9-201ENST00000342782 RPS29P62273 56 aaKnown RBP11.67□□□□□ -0.54
DUSP9-201ENST00000342782 J3QL48 77 aa11.62□□□□□ -0.55
DUSP9-201ENST00000342782 LINC01554Q52M75 96 aa11.56□□□□□ -0.56
DUSP9-201ENST00000342782 HERC1Q15751 4861 aa11.54□□□□□ -0.56
DUSP9-201ENST00000342782 LPAP08519 4548 aa11.44□□□□□ -0.58
DUSP9-201ENST00000342782 C9orf92A6NGG3 77 aa11.44□□□□□ -0.58
DUSP9-201ENST00000342782 CSAG1Q6PB30 78 aa11.41□□□□□ -0.58
DUSP9-201ENST00000342782 H0YAA0 97 aa11.3□□□□□ -0.6
DUSP9-201ENST00000342782 LRP2P98164 4655 aa11.28□□□□□ -0.6
DUSP9-201ENST00000342782 A8MUU9 505 aa11.26□□□□□ -0.61
DUSP9-201ENST00000342782 HMCN2Q8NDA2 5059 aa11.22□□□□□ -0.61
DUSP9-201ENST00000342782 A0A1B0GU33 70 aa11.21□□□□□ -0.61
DUSP9-201ENST00000342782 KRTAP3-1Q9BYR8 98 aa11.2□□□□□ -0.62
DUSP9-201ENST00000342782 XP32Q5T750 250 aa11.19□□□□□ -0.62
DUSP9-201ENST00000342782 C20orf166-AS1Q96NR2 134 aa11.19□□□□□ -0.62
DUSP9-201ENST00000342782 TPRXLQ17RH7 258 aa11.18□□□□□ -0.62
DUSP9-201ENST00000342782 H1FX-AS1Q4G0G2 97 aa11.15□□□□□ -0.63
DUSP9-201ENST00000342782 KRTAP25-1Q3LHN0 102 aa11.09□□□□□ -0.63
DUSP9-201ENST00000342782 RPL37P61927 97 aaKnown RBP11.03□□□□□ -0.64
DUSP9-201ENST00000342782 COX6B2Q6YFQ2 88 aa10.96□□□□□ -0.66
DUSP9-201ENST00000342782 K7ERS5 55 aa10.94□□□□□ -0.66
DUSP9-201ENST00000342782 H3BS24 57 aa10.91□□□□□ -0.66
DUSP9-201ENST00000342782 MUC2Q02817 5179 aa10.87□□□□□ -0.67
DUSP9-201ENST00000342782 UBR4Q5T4S7 5183 aa10.87□□□□□ -0.67
DUSP9-201ENST00000342782 ROMO1P60602 79 aa10.86□□□□□ -0.67
DUSP9-201ENST00000342782 CRIPTQ9P021 101 aa10.79□□□□□ -0.68
DUSP9-201ENST00000342782 KRTAP4-1Q9BYQ7 146 aa10.78□□□□□ -0.68
DUSP9-201ENST00000342782 SEC61BP60468 96 aaKnown RBP10.77□□□□□ -0.69
DUSP9-201ENST00000342782 MUC17Q685J3 4493 aa10.76□□□□□ -0.69
DUSP9-201ENST00000342782 KRTAP10-6P60371 365 aaPredicted RBP10.73□□□□□ -0.69
DUSP9-201ENST00000342782 RNF213Q63HN8 5207 aa10.73□□□□□ -0.69
DUSP9-201ENST00000342782 KRTAP3-3Q9BYR6 98 aa10.7□□□□□ -0.7
DUSP9-201ENST00000342782 KRTAP13-4Q3LI77 160 aa10.65□□□□□ -0.71
DUSP9-201ENST00000342782 KRTAP3-2Q9BYR7 98 aa10.62□□□□□ -0.71
DUSP9-201ENST00000342782 A0A0D9SG42 100 aa10.59□□□□□ -0.71
DUSP9-201ENST00000342782 S4R3F8 94 aa10.54□□□□□ -0.72
DUSP9-201ENST00000342782 P0C880 135 aa10.52□□□□□ -0.73
DUSP9-201ENST00000342782 FAT4Q6V0I7 4981 aa10.4□□□□□ -0.74
DUSP9-201ENST00000342782 KRTAP19-2Q3LHN2 52 aa10.39□□□□□ -0.75
DUSP9-201ENST00000342782 SPINT4Q6UDR6 99 aa10.38□□□□□ -0.75
DUSP9-201ENST00000342782 C10orf95Q9H7T3 257 aa10.36□□□□□ -0.75
DUSP9-201ENST00000342782 KRTAP12-2P59991 146 aa10.34□□□□□ -0.75
DUSP9-201ENST00000342782 KRTAP12-1P59990 96 aa10.26□□□□□ -0.77
DUSP9-201ENST00000342782 LCE2CQ5TA81 110 aa10.25□□□□□ -0.77
DUSP9-201ENST00000342782 FLGP20930 4061 aaPredicted RBP10.2□□□□□ -0.78
DUSP9-201ENST00000342782 KRTAP15-1Q3LI76 137 aa10.19□□□□□ -0.78
DUSP9-201ENST00000342782 M0QZ58 72 aa10.15□□□□□ -0.79
DUSP9-201ENST00000342782 MT1HP80294 61 aa10.04□□□□□ -0.8
DUSP9-201ENST00000342782 NDUFAF8A1L188 74 aa10.04□□□□□ -0.8
DUSP9-201ENST00000342782 M0R2T5 61 aa9.9□□□□□ -0.82
DUSP9-201ENST00000342782 LCE2AQ5TA79 106 aaPredicted RBP9.82□□□□□ -0.84
DUSP9-201ENST00000342782 R4GN34 69 aa9.82□□□□□ -0.84
DUSP9-201ENST00000342782 LORP23490 312 aaPredicted RBP9.64□□□□□ -0.87
DUSP9-201ENST00000342782 KRTAP9-8Q9BYQ0 159 aa9.64□□□□□ -0.87
DUSP9-201ENST00000342782 PLAC4Q8WY50 150 aa9.6□□□□□ -0.87
DUSP9-201ENST00000342782 MT2AP02795 61 aa9.58□□□□□ -0.88
DUSP9-201ENST00000342782 MT1FP04733 61 aa9.55□□□□□ -0.88
DUSP9-201ENST00000342782 KRTAP10-10P60014 251 aa9.48□□□□□ -0.89
DUSP9-201ENST00000342782 PP632Q6XCG6 107 aa9.42□□□□□ -0.9
DUSP9-201ENST00000342782 CAMK2N1Q7Z7J9 78 aa9.35□□□□□ -0.91
DUSP9-201ENST00000342782 KRTAP9-3Q9BYQ3 159 aa9.29□□□□□ -0.92
DUSP9-201ENST00000342782 KRTAP19-1Q8IUB9 90 aa9.28□□□□□ -0.92
DUSP9-201ENST00000342782 LUZP6Q538Z0 58 aa9.24□□□□□ -0.93
DUSP9-201ENST00000342782 SPRR2GQ9BYE4 73 aa9.2□□□□□ -0.94
DUSP9-201ENST00000342782 LCE2BO14633 110 aa9.13□□□□□ -0.95
DUSP9-201ENST00000342782 USH2AO75445 5202 aa9.09□□□□□ -0.95
DUSP9-201ENST00000342782 TNP1P09430 55 aa9.06□□□□□ -0.96
DUSP9-201ENST00000342782 FSIP2Q5CZC0 6907 aa9.04□□□□□ -0.96
DUSP9-201ENST00000342782 KRTAP23-1A1A580 65 aa9.04□□□□□ -0.96
DUSP9-201ENST00000342782 A0A0A0MQY5 61 aa8.99□□□□□ -0.97
DUSP9-201ENST00000342782 KRTAP19-8Q3LI54 63 aa8.98□□□□□ -0.97
DUSP9-201ENST00000342782 MT1BP07438 61 aa8.97□□□□□ -0.97
DUSP9-201ENST00000342782 SPRR5A0A1B0GTR4 108 aa8.91□□□□□ -0.98
DUSP9-201ENST00000342782 LCE2DQ5TA82 110 aaPredicted RBP8.9□□□□□ -0.98
DUSP9-201ENST00000342782 KRTAP9-2Q9BYQ4 174 aa8.81□□□□□ -1
DUSP9-201ENST00000342782 SSPOA2VEC9 5147 aa8.79□□□□□ -1
DUSP9-201ENST00000342782 MT1XP80297 61 aa8.63□□□□□ -1.03
DUSP9-201ENST00000342782 KRTAP10-5P60370 271 aa8.6□□□□□ -1.03
DUSP9-201ENST00000342782 KRTAP19-6Q3LI70 58 aa8.52□□□□□ -1.05
DUSP9-201ENST00000342782 LCE3AQ5TA76 89 aa8.52□□□□□ -1.05
DUSP9-201ENST00000342782 FCGBPQ9Y6R7 5405 aaPredicted RBP8.46□□□□□ -1.06
DUSP9-201ENST00000342782 CRCT1Q9UGL9 99 aa8.42□□□□□ -1.06
DUSP9-201ENST00000342782 PRO2289Q9P1D8 64 aa8.41□□□□□ -1.06
DUSP9-201ENST00000342782 KRTAP8-1Q8IUC2 63 aa8.34□□□□□ -1.07
DUSP9-201ENST00000342782 KRTAP10-7P60409 375 aaPredicted RBP8.31□□□□□ -1.08
DUSP9-201ENST00000342782 KMT2DO14686 5537 aa8.3□□□□□ -1.08
DUSP9-201ENST00000342782 KRTAP9-6A0A140TA67 174 aa8.17□□□□□ -1.1
DUSP9-201ENST00000342782 MACF1Q9UPN3 7388 aaKnown RBP8.15□□□□□ -1.11
DUSP9-201ENST00000342782 KRTAP10-12P60413 245 aa8.12□□□□□ -1.11
DUSP9-201ENST00000342782 KRTAP4-8A0A0G2JLE6 195 aa8.11□□□□□ -1.11
DUSP9-201ENST00000342782 KRTAP12-3P60328 96 aa8.11□□□□□ -1.11
DUSP9-201ENST00000342782 KRTAP4-8Q9BYQ9 185 aa8.11□□□□□ -1.11
DUSP9-201ENST00000342782 INE1O15225 51 aa8.1□□□□□ -1.11
DUSP9-201ENST00000342782 SYNE2Q8WXH0 6885 aaKnown RBP7.96□□□□□ -1.13
DUSP9-201ENST00000342782 KRTAP9-1A8MXZ3 250 aaPredicted RBP7.82□□□□□ -1.16
DUSP9-201ENST00000342782 KRTAP19-5Q3LI72 72 aa7.74□□□□□ -1.17
DUSP9-201ENST00000342782 MUC12Q9UKN1 5478 aa7.71□□□□□ -1.18
DUSP9-201ENST00000342782 KRTAP19-7Q3SYF9 63 aa7.7□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 9.3 ms