RNA–Protein interactions for RNA: ENST00000342084.8

PTPRR-202, Transcript of protein tyrosine phosphatase, receptor type R, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene PTPRR, Length 2,037 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRR-202ENST00000342084 LRP1Q07954 4544 aaKnown RBP3.9□□□□□ -1.78
PTPRR-202ENST00000342084 KMT2CQ8NEZ4 4911 aaKnown RBP3.89□□□□□ -1.79
PTPRR-202ENST00000342084 FAT3Q8TDW7 4589 aa3.89□□□□□ -1.79
PTPRR-202ENST00000342084 H0YAA0 97 aa3.87□□□□□ -1.79
PTPRR-202ENST00000342084 TNXBP22105 4242 aa3.85□□□□□ -1.79
PTPRR-202ENST00000342084 HSPG2P98160 4391 aa3.84□□□□□ -1.79
PTPRR-202ENST00000342084 FLG2Q5D862 2391 aaPredicted RBP3.84□□□□□ -1.8
PTPRR-202ENST00000342084 MYCBP2O75592 4640 aa3.83□□□□□ -1.8
PTPRR-202ENST00000342084 A0A1B0GU33 70 aa3.82□□□□□ -1.8
PTPRR-202ENST00000342084 CSAG1Q6PB30 78 aa3.82□□□□□ -1.8
PTPRR-202ENST00000342084 H1FX-AS1Q4G0G2 97 aa3.81□□□□□ -1.8
PTPRR-202ENST00000342084 COX6B2Q6YFQ2 88 aa3.8□□□□□ -1.8
PTPRR-202ENST00000342084 RYR3Q15413 4870 aa3.78□□□□□ -1.8
PTPRR-202ENST00000342084 KRTAP17-1Q9BYP8 105 aa3.78□□□□□ -1.8
PTPRR-202ENST00000342084 KRTAP10-8P60410 259 aa3.77□□□□□ -1.81
PTPRR-202ENST00000342084 Q5VSD8 79 aa3.77□□□□□ -1.81
PTPRR-202ENST00000342084 LINC01554Q52M75 96 aa3.76□□□□□ -1.81
PTPRR-202ENST00000342084 LPAP08519 4548 aa3.75□□□□□ -1.81
PTPRR-202ENST00000342084 XP32Q5T750 250 aa3.75□□□□□ -1.81
PTPRR-202ENST00000342084 RYR1P21817 5038 aa3.74□□□□□ -1.81
PTPRR-202ENST00000342084 RPL37P61927 97 aaKnown RBP3.73□□□□□ -1.81
PTPRR-202ENST00000342084 CRIPTQ9P021 101 aa3.73□□□□□ -1.81
PTPRR-202ENST00000342084 KRTAP13-4Q3LI77 160 aa3.72□□□□□ -1.81
PTPRR-202ENST00000342084 DMBT1Q9UGM3 2413 aaPredicted RBP3.72□□□□□ -1.81
PTPRR-202ENST00000342084 A0A0D9SG42 100 aa3.71□□□□□ -1.82
PTPRR-202ENST00000342084 KRTAP10-6P60371 365 aaPredicted RBP3.71□□□□□ -1.82
PTPRR-202ENST00000342084 KIAA1109Q2LD37 5005 aa3.71□□□□□ -1.82
PTPRR-202ENST00000342084 S4R3F8 94 aa3.68□□□□□ -1.82
PTPRR-202ENST00000342084 KRTAP25-1Q3LHN0 102 aa3.68□□□□□ -1.82
PTPRR-202ENST00000342084 P0C880 135 aa3.67□□□□□ -1.82
PTPRR-202ENST00000342084 KRTAP4-8Q9BYQ9 185 aa3.67□□□□□ -1.82
PTPRR-202ENST00000342084 LRP2P98164 4655 aa3.67□□□□□ -1.82
PTPRR-202ENST00000342084 MT1HL1P0DM35 61 aa3.66□□□□□ -1.82
PTPRR-202ENST00000342084 K7ERS5 55 aa3.65□□□□□ -1.82
PTPRR-202ENST00000342084 EPPK1P58107 5090 aaKnown RBP3.64□□□□□ -1.83
PTPRR-202ENST00000342084 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.64□□□□□ -1.83
PTPRR-202ENST00000342084 ROMO1P60602 79 aa3.61□□□□□ -1.83
PTPRR-202ENST00000342084 KRTAP9-6A0A140TA67 174 aa3.61□□□□□ -1.83
PTPRR-202ENST00000342084 KRTAP9-2Q9BYQ4 174 aa3.61□□□□□ -1.83
PTPRR-202ENST00000342084 ABCA13Q86UQ4 5058 aa3.61□□□□□ -1.83
PTPRR-202ENST00000342084 KRTAP12-2P59991 146 aa3.59□□□□□ -1.83
PTPRR-202ENST00000342084 C10orf95Q9H7T3 257 aa3.58□□□□□ -1.84
PTPRR-202ENST00000342084 TPRXLQ17RH7 258 aa3.56□□□□□ -1.84
PTPRR-202ENST00000342084 SPINT4Q6UDR6 99 aa3.56□□□□□ -1.84
PTPRR-202ENST00000342084 KRTAP4-5Q9BYR2 181 aa3.55□□□□□ -1.84
PTPRR-202ENST00000342084 KRTAP12-1P59990 96 aa3.53□□□□□ -1.84
PTPRR-202ENST00000342084 MUC17Q685J3 4493 aa3.51□□□□□ -1.85
PTPRR-202ENST00000342084 M0QZ58 72 aa3.46□□□□□ -1.86
PTPRR-202ENST00000342084 KRTAP4-1Q9BYQ7 146 aa3.46□□□□□ -1.86
PTPRR-202ENST00000342084 KRTAP4-8A0A0G2JLE6 195 aa3.45□□□□□ -1.86
PTPRR-202ENST00000342084 LCE3BQ5TA77 95 aa3.44□□□□□ -1.86
PTPRR-202ENST00000342084 KRTAP9-9Q9BYP9 154 aa3.43□□□□□ -1.86
PTPRR-202ENST00000342084 KRTAP9-4Q9BYQ2 154 aa3.43□□□□□ -1.86
PTPRR-202ENST00000342084 R4GN34 69 aa3.42□□□□□ -1.86
PTPRR-202ENST00000342084 HERC2O95714 4834 aa3.4□□□□□ -1.86
PTPRR-202ENST00000342084 MUC2Q02817 5179 aa3.4□□□□□ -1.87
PTPRR-202ENST00000342084 KRTAP15-1Q3LI76 137 aa3.37□□□□□ -1.87
PTPRR-202ENST00000342084 KRTAP4-7Q9BYR0 210 aa3.36□□□□□ -1.87
PTPRR-202ENST00000342084 KRTAP19-2Q3LHN2 52 aa3.36□□□□□ -1.87
PTPRR-202ENST00000342084 CAMK2N1Q7Z7J9 78 aa3.33□□□□□ -1.88
PTPRR-202ENST00000342084 LUZP6Q538Z0 58 aa3.32□□□□□ -1.88
PTPRR-202ENST00000342084 KRTAP4-12Q9BQ66 201 aa3.32□□□□□ -1.88
PTPRR-202ENST00000342084 NDUFAF8A1L188 74 aa3.31□□□□□ -1.88
PTPRR-202ENST00000342084 BIRC6Q9NR09 4857 aa3.3□□□□□ -1.88
PTPRR-202ENST00000342084 PCLOQ9Y6V0 5065 aa3.29□□□□□ -1.88
PTPRR-202ENST00000342084 HERC1Q15751 4861 aa3.28□□□□□ -1.88
PTPRR-202ENST00000342084 FLGP20930 4061 aaPredicted RBP3.28□□□□□ -1.88
PTPRR-202ENST00000342084 KRTAP19-4Q3LI73 84 aa3.26□□□□□ -1.89
PTPRR-202ENST00000342084 FAT4Q6V0I7 4981 aa3.24□□□□□ -1.89
PTPRR-202ENST00000342084 KRTAP4-2Q9BYR5 136 aa3.24□□□□□ -1.89
PTPRR-202ENST00000342084 HMCN2Q8NDA2 5059 aa3.23□□□□□ -1.89
PTPRR-202ENST00000342084 LCE1DQ5T752 114 aa3.22□□□□□ -1.89
PTPRR-202ENST00000342084 KRTAP5-3Q6L8H2 238 aa3.21□□□□□ -1.9
PTPRR-202ENST00000342084 PLAC4Q8WY50 150 aa3.2□□□□□ -1.9
PTPRR-202ENST00000342084 KRTAP4-9Q9BYQ8 210 aa3.2□□□□□ -1.9
PTPRR-202ENST00000342084 KRTAP9-8Q9BYQ0 159 aa3.17□□□□□ -1.9
PTPRR-202ENST00000342084 RNF213Q63HN8 5207 aa3.13□□□□□ -1.91
PTPRR-202ENST00000342084 PP632Q6XCG6 107 aa3.12□□□□□ -1.91
PTPRR-202ENST00000342084 KRTAP19-1Q8IUB9 90 aa3.12□□□□□ -1.91
PTPRR-202ENST00000342084 UBR4Q5T4S7 5183 aa3.11□□□□□ -1.91
PTPRR-202ENST00000342084 TNP1P09430 55 aa3.1□□□□□ -1.91
PTPRR-202ENST00000342084 M0R2T5 61 aa3.1□□□□□ -1.91
PTPRR-202ENST00000342084 MT1HP80294 61 aa3.07□□□□□ -1.92
PTPRR-202ENST00000342084 SPRR2GQ9BYE4 73 aa3.06□□□□□ -1.92
PTPRR-202ENST00000342084 MT1FP04733 61 aa3.05□□□□□ -1.92
PTPRR-202ENST00000342084 MT2AP02795 61 aa3.03□□□□□ -1.92
PTPRR-202ENST00000342084 LCE5AQ5TCM9 118 aa3.03□□□□□ -1.92
PTPRR-202ENST00000342084 KRTAP10-10P60014 251 aa3.02□□□□□ -1.93
PTPRR-202ENST00000342084 LCE3AQ5TA76 89 aa3□□□□□ -1.93
PTPRR-202ENST00000342084 KRTAP4-11Q9BYQ6 195 aa3□□□□□ -1.93
PTPRR-202ENST00000342084 KRTAP9-7A8MTY7 169 aa2.98□□□□□ -1.93
PTPRR-202ENST00000342084 LCE4AQ5TA78 99 aa2.96□□□□□ -1.94
PTPRR-202ENST00000342084 SPRR5A0A1B0GTR4 108 aa2.95□□□□□ -1.94
PTPRR-202ENST00000342084 MT1BP07438 61 aa2.93□□□□□ -1.94
PTPRR-202ENST00000342084 KRTAP10-5P60370 271 aa2.92□□□□□ -1.94
PTPRR-202ENST00000342084 KRTAP19-8Q3LI54 63 aa2.92□□□□□ -1.94
PTPRR-202ENST00000342084 MT1XP80297 61 aa2.92□□□□□ -1.94
PTPRR-202ENST00000342084 KRTAP10-7P60409 375 aaPredicted RBP2.86□□□□□ -1.95
PTPRR-202ENST00000342084 KRTAP8-1Q8IUC2 63 aa2.86□□□□□ -1.95
PTPRR-202ENST00000342084 KRTAP9-3Q9BYQ3 159 aa2.86□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms