RNA–Protein interactions for RNA: ENST00000341162.8

FCF1-201, Transcript of FCF1, rRNA-processing protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene FCF1, Length 4,341 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FCF1-201ENST00000341162 TGP01266 2768 aa3.77□□□□□ -1.81
FCF1-201ENST00000341162 SPINK7P58062 85 aa3.76□□□□□ -1.81
FCF1-201ENST00000341162 PMAIP1Q13794 54 aa3.76□□□□□ -1.81
FCF1-201ENST00000341162 MUC17Q685J3 4493 aa3.76□□□□□ -1.81
FCF1-201ENST00000341162 KTN1-AS1Q86SY8 53 aa3.76□□□□□ -1.81
FCF1-201ENST00000341162 MT1HL1P0DM35 61 aa3.74□□□□□ -1.81
FCF1-201ENST00000341162 KRTAP3-1Q9BYR8 98 aa3.73□□□□□ -1.81
FCF1-201ENST00000341162 MIR22HGQ0VDD5 57 aa3.73□□□□□ -1.81
FCF1-201ENST00000341162 C9orf92A6NGG3 77 aa3.71□□□□□ -1.81
FCF1-201ENST00000341162 HERC2O95714 4834 aa3.71□□□□□ -1.82
FCF1-201ENST00000341162 H0YAA0 97 aa3.68□□□□□ -1.82
FCF1-201ENST00000341162 H1FX-AS1Q4G0G2 97 aa3.68□□□□□ -1.82
FCF1-201ENST00000341162 EPPK1P58107 5090 aaKnown RBP3.67□□□□□ -1.82
FCF1-201ENST00000341162 LRP1Q07954 4544 aaKnown RBP3.66□□□□□ -1.82
FCF1-201ENST00000341162 KRTAP17-1Q9BYP8 105 aa3.66□□□□□ -1.82
FCF1-201ENST00000341162 BIRC6Q9NR09 4857 aa3.66□□□□□ -1.82
FCF1-201ENST00000341162 A0A1B0GU33 70 aa3.64□□□□□ -1.83
FCF1-201ENST00000341162 S4R3F8 94 aa3.64□□□□□ -1.83
FCF1-201ENST00000341162 MYCBP2O75592 4640 aa3.63□□□□□ -1.83
FCF1-201ENST00000341162 A8MU10 97 aa3.61□□□□□ -1.83
FCF1-201ENST00000341162 LORP23490 312 aaPredicted RBP3.61□□□□□ -1.83
FCF1-201ENST00000341162 K7ERS5 55 aa3.6□□□□□ -1.83
FCF1-201ENST00000341162 ABCA13Q86UQ4 5058 aa3.59□□□□□ -1.84
FCF1-201ENST00000341162 KRTAP10-6P60371 365 aaPredicted RBP3.57□□□□□ -1.84
FCF1-201ENST00000341162 M0QZ58 72 aa3.55□□□□□ -1.84
FCF1-201ENST00000341162 CSAG1Q6PB30 78 aa3.53□□□□□ -1.84
FCF1-201ENST00000341162 A0A0A0MQY5 61 aa3.52□□□□□ -1.85
FCF1-201ENST00000341162 CRIPTQ9P021 101 aa3.46□□□□□ -1.86
FCF1-201ENST00000341162 ROMO1P60602 79 aa3.45□□□□□ -1.86
FCF1-201ENST00000341162 KRTAP19-2Q3LHN2 52 aa3.43□□□□□ -1.86
FCF1-201ENST00000341162 ADM2Q7Z4H4 148 aa3.43□□□□□ -1.86
FCF1-201ENST00000341162 KRTAP25-1Q3LHN0 102 aa3.43□□□□□ -1.86
FCF1-201ENST00000341162 PCLOQ9Y6V0 5065 aa3.42□□□□□ -1.86
FCF1-201ENST00000341162 KRTAP13-4Q3LI77 160 aa3.41□□□□□ -1.86
FCF1-201ENST00000341162 KIAA1109Q2LD37 5005 aa3.41□□□□□ -1.86
FCF1-201ENST00000341162 LINC01554Q52M75 96 aa3.4□□□□□ -1.86
FCF1-201ENST00000341162 PLAC4Q8WY50 150 aa3.4□□□□□ -1.86
FCF1-201ENST00000341162 KRTAP4-5Q9BYR2 181 aa3.4□□□□□ -1.87
FCF1-201ENST00000341162 FLGP20930 4061 aaPredicted RBP3.39□□□□□ -1.87
FCF1-201ENST00000341162 P0C880 135 aa3.39□□□□□ -1.87
FCF1-201ENST00000341162 KRTAP12-1P59990 96 aa3.38□□□□□ -1.87
FCF1-201ENST00000341162 HMCN2Q8NDA2 5059 aa3.37□□□□□ -1.87
FCF1-201ENST00000341162 HERC1Q15751 4861 aa3.35□□□□□ -1.87
FCF1-201ENST00000341162 PRAC1Q96KF2 57 aa3.34□□□□□ -1.87
FCF1-201ENST00000341162 A0A0D9SG42 100 aa3.33□□□□□ -1.88
FCF1-201ENST00000341162 KRTAP4-1Q9BYQ7 146 aa3.33□□□□□ -1.88
FCF1-201ENST00000341162 PRO2289Q9P1D8 64 aa3.32□□□□□ -1.88
FCF1-201ENST00000341162 KRTAP23-1A1A580 65 aa3.32□□□□□ -1.88
FCF1-201ENST00000341162 KRTAP12-2P59991 146 aa3.31□□□□□ -1.88
FCF1-201ENST00000341162 R4GN34 69 aa3.3□□□□□ -1.88
FCF1-201ENST00000341162 PP632Q6XCG6 107 aa3.26□□□□□ -1.89
FCF1-201ENST00000341162 LRP2P98164 4655 aa3.26□□□□□ -1.89
FCF1-201ENST00000341162 SPINT4Q6UDR6 99 aa3.25□□□□□ -1.89
FCF1-201ENST00000341162 LPAP08519 4548 aa3.25□□□□□ -1.89
FCF1-201ENST00000341162 CAMK2N1Q7Z7J9 78 aa3.22□□□□□ -1.89
FCF1-201ENST00000341162 SPRR2GQ9BYE4 73 aa3.21□□□□□ -1.9
FCF1-201ENST00000341162 KRTAP10-10P60014 251 aa3.17□□□□□ -1.9
FCF1-201ENST00000341162 KRTAP9-6A0A140TA67 174 aa3.17□□□□□ -1.9
FCF1-201ENST00000341162 C10orf95Q9H7T3 257 aa3.15□□□□□ -1.9
FCF1-201ENST00000341162 MT1HP80294 61 aa3.12□□□□□ -1.91
FCF1-201ENST00000341162 KRTAP19-8Q3LI54 63 aa3.12□□□□□ -1.91
FCF1-201ENST00000341162 KRTAP15-1Q3LI76 137 aa3.1□□□□□ -1.91
FCF1-201ENST00000341162 TNP1P09430 55 aa3.1□□□□□ -1.91
FCF1-201ENST00000341162 KRTAP19-1Q8IUB9 90 aa3.07□□□□□ -1.92
FCF1-201ENST00000341162 MT2AP02795 61 aa3.05□□□□□ -1.92
FCF1-201ENST00000341162 KRTAP9-8Q9BYQ0 159 aa3.05□□□□□ -1.92
FCF1-201ENST00000341162 UBR4Q5T4S7 5183 aa3.03□□□□□ -1.92
FCF1-201ENST00000341162 RNF213Q63HN8 5207 aa3.02□□□□□ -1.93
FCF1-201ENST00000341162 MT1FP04733 61 aa3□□□□□ -1.93
FCF1-201ENST00000341162 SPRR5A0A1B0GTR4 108 aa2.98□□□□□ -1.93
FCF1-201ENST00000341162 KRTAP9-3Q9BYQ3 159 aa2.95□□□□□ -1.94
FCF1-201ENST00000341162 GPR98Q8WXG9 6306 aa2.95□□□□□ -1.94
FCF1-201ENST00000341162 KRTAP19-4Q3LI73 84 aa2.95□□□□□ -1.94
FCF1-201ENST00000341162 MT1BP07438 61 aa2.94□□□□□ -1.94
FCF1-201ENST00000341162 LUZP6Q538Z0 58 aa2.93□□□□□ -1.94
FCF1-201ENST00000341162 KRTAP8-1Q8IUC2 63 aa2.93□□□□□ -1.94
FCF1-201ENST00000341162 KRTAP9-2Q9BYQ4 174 aa2.9□□□□□ -1.95
FCF1-201ENST00000341162 KRTAP10-5P60370 271 aa2.89□□□□□ -1.95
FCF1-201ENST00000341162 MT1XP80297 61 aa2.89□□□□□ -1.95
FCF1-201ENST00000341162 FAT4Q6V0I7 4981 aa2.89□□□□□ -1.95
FCF1-201ENST00000341162 CRCT1Q9UGL9 99 aa2.85□□□□□ -1.95
FCF1-201ENST00000341162 KRTAP10-12P60413 245 aa2.83□□□□□ -1.96
FCF1-201ENST00000341162 LCE3AQ5TA76 89 aa2.82□□□□□ -1.96
FCF1-201ENST00000341162 LCE4AQ5TA78 99 aa2.82□□□□□ -1.96
FCF1-201ENST00000341162 LOC100996750A0A140TA64 210 aa2.81□□□□□ -1.96
FCF1-201ENST00000341162 KRTAP4-6Q9BYQ5 205 aa2.81□□□□□ -1.96
FCF1-201ENST00000341162 MUC2Q02817 5179 aa2.81□□□□□ -1.96
FCF1-201ENST00000341162 NDUFAF8A1L188 74 aa2.79□□□□□ -1.96
FCF1-201ENST00000341162 KRTAP9-7A8MTY7 169 aa2.76□□□□□ -1.97
FCF1-201ENST00000341162 KRTAP12-3P60328 96 aa2.75□□□□□ -1.97
FCF1-201ENST00000341162 MACF1Q9UPN3 7388 aaKnown RBP2.7□□□□□ -1.98
FCF1-201ENST00000341162 KRTAP10-7P60409 375 aaPredicted RBP2.7□□□□□ -1.98
FCF1-201ENST00000341162 KRTAP19-6Q3LI70 58 aa2.69□□□□□ -1.98
FCF1-201ENST00000341162 SSPOA2VEC9 5147 aa2.65□□□□□ -1.99
FCF1-201ENST00000341162 KRTAP9-4Q9BYQ2 154 aa2.64□□□□□ -1.99
FCF1-201ENST00000341162 USH2AO75445 5202 aa2.64□□□□□ -1.99
FCF1-201ENST00000341162 KRTAP9-9Q9BYP9 154 aa2.63□□□□□ -1.99
FCF1-201ENST00000341162 LCE3CQ5T5A8 94 aa2.62□□□□□ -1.99
FCF1-201ENST00000341162 KRTAP19-5Q3LI72 72 aa2.61□□□□□ -1.99
FCF1-201ENST00000341162 INE1O15225 51 aa2.59□□□□□ -1.99
Retrieved 100 of 20,778 RNA–protein pairs in 246.8 ms