RNA–Protein interactions for RNA: ENST00000340857.3

H1F0-201, Transcript of H1 histone family member 0, humanhuman

APPRIS P1 BASIC

Gene H1F0, Length 2,344 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
H1F0-201ENST00000340857 C20orf166-AS1Q96NR2 134 aa8.82□□□□□ -1
H1F0-201ENST00000340857 TNXBP22105 4242 aa8.81□□□□□ -1
H1F0-201ENST00000340857 PCLOQ9Y6V0 5065 aa8.8□□□□□ -1
H1F0-201ENST00000340857 KRTAP3-1Q9BYR8 98 aa8.76□□□□□ -1.01
H1F0-201ENST00000340857 KRTAP10-8P60410 259 aa8.7□□□□□ -1.02
H1F0-201ENST00000340857 MT1HL1P0DM35 61 aa8.7□□□□□ -1.02
H1F0-201ENST00000340857 H0YAA0 97 aa8.69□□□□□ -1.02
H1F0-201ENST00000340857 DMBT1Q9UGM3 2413 aaPredicted RBP8.64□□□□□ -1.03
H1F0-201ENST00000340857 A0A1B0GU33 70 aa8.63□□□□□ -1.03
H1F0-201ENST00000340857 LINC01554Q52M75 96 aa8.62□□□□□ -1.03
H1F0-201ENST00000340857 CSAG1Q6PB30 78 aa8.6□□□□□ -1.03
H1F0-201ENST00000340857 H1FX-AS1Q4G0G2 97 aa8.59□□□□□ -1.03
H1F0-201ENST00000340857 COX6B2Q6YFQ2 88 aa8.58□□□□□ -1.04
H1F0-201ENST00000340857 J3QL48 77 aa8.54□□□□□ -1.04
H1F0-201ENST00000340857 HERC1Q15751 4861 aa8.53□□□□□ -1.04
H1F0-201ENST00000340857 RPL37P61927 97 aaKnown RBP8.4□□□□□ -1.06
H1F0-201ENST00000340857 KRTAP3-3Q9BYR6 98 aa8.38□□□□□ -1.07
H1F0-201ENST00000340857 KRTAP25-1Q3LHN0 102 aa8.37□□□□□ -1.07
H1F0-201ENST00000340857 K7ERS5 55 aa8.35□□□□□ -1.07
H1F0-201ENST00000340857 KRTAP10-6P60371 365 aaPredicted RBP8.35□□□□□ -1.07
H1F0-201ENST00000340857 XP32Q5T750 250 aa8.35□□□□□ -1.07
H1F0-201ENST00000340857 LPAP08519 4548 aa8.35□□□□□ -1.07
H1F0-201ENST00000340857 HMCN2Q8NDA2 5059 aa8.3□□□□□ -1.08
H1F0-201ENST00000340857 KRTAP3-2Q9BYR7 98 aa8.29□□□□□ -1.08
H1F0-201ENST00000340857 KRTAP13-4Q3LI77 160 aa8.27□□□□□ -1.09
H1F0-201ENST00000340857 S4R3F8 94 aa8.26□□□□□ -1.09
H1F0-201ENST00000340857 LRP2P98164 4655 aa8.23□□□□□ -1.09
H1F0-201ENST00000340857 CRIPTQ9P021 101 aa8.21□□□□□ -1.1
H1F0-201ENST00000340857 ROMO1P60602 79 aa8.2□□□□□ -1.1
H1F0-201ENST00000340857 A0A0D9SG42 100 aa8.19□□□□□ -1.1
H1F0-201ENST00000340857 P0C880 135 aa8.16□□□□□ -1.1
H1F0-201ENST00000340857 TPRXLQ17RH7 258 aa8.15□□□□□ -1.1
H1F0-201ENST00000340857 H3BS24 57 aa8.07□□□□□ -1.12
H1F0-201ENST00000340857 UBR4Q5T4S7 5183 aa8.03□□□□□ -1.12
H1F0-201ENST00000340857 KRTAP12-2P59991 146 aa8.01□□□□□ -1.13
H1F0-201ENST00000340857 MUC2Q02817 5179 aa7.97□□□□□ -1.13
H1F0-201ENST00000340857 KRTAP12-1P59990 96 aa7.95□□□□□ -1.14
H1F0-201ENST00000340857 C10orf95Q9H7T3 257 aa7.92□□□□□ -1.14
H1F0-201ENST00000340857 MUC17Q685J3 4493 aa7.92□□□□□ -1.14
H1F0-201ENST00000340857 SPINT4Q6UDR6 99 aa7.9□□□□□ -1.14
H1F0-201ENST00000340857 RNF213Q63HN8 5207 aa7.89□□□□□ -1.15
H1F0-201ENST00000340857 M0QZ58 72 aa7.89□□□□□ -1.15
H1F0-201ENST00000340857 SEC61BP60468 96 aaKnown RBP7.85□□□□□ -1.15
H1F0-201ENST00000340857 KRTAP4-1Q9BYQ7 146 aa7.85□□□□□ -1.15
H1F0-201ENST00000340857 R4GN34 69 aa7.67□□□□□ -1.18
H1F0-201ENST00000340857 KRTAP15-1Q3LI76 137 aa7.66□□□□□ -1.18
H1F0-201ENST00000340857 FAT4Q6V0I7 4981 aa7.63□□□□□ -1.19
H1F0-201ENST00000340857 LORP23490 312 aaPredicted RBP7.59□□□□□ -1.19
H1F0-201ENST00000340857 KRTAP19-2Q3LHN2 52 aa7.57□□□□□ -1.2
H1F0-201ENST00000340857 LCE2CQ5TA81 110 aa7.5□□□□□ -1.21
H1F0-201ENST00000340857 NDUFAF8A1L188 74 aa7.47□□□□□ -1.21
H1F0-201ENST00000340857 FLGP20930 4061 aaPredicted RBP7.44□□□□□ -1.22
H1F0-201ENST00000340857 MT1HP80294 61 aa7.35□□□□□ -1.23
H1F0-201ENST00000340857 CAMK2N1Q7Z7J9 78 aa7.29□□□□□ -1.24
H1F0-201ENST00000340857 PLAC4Q8WY50 150 aa7.28□□□□□ -1.24
H1F0-201ENST00000340857 LCE2AQ5TA79 106 aaPredicted RBP7.28□□□□□ -1.24
H1F0-201ENST00000340857 PP632Q6XCG6 107 aa7.23□□□□□ -1.25
H1F0-201ENST00000340857 M0R2T5 61 aa7.21□□□□□ -1.26
H1F0-201ENST00000340857 KRTAP9-8Q9BYQ0 159 aa7.05□□□□□ -1.28
H1F0-201ENST00000340857 TNP1P09430 55 aa7.03□□□□□ -1.28
H1F0-201ENST00000340857 KRTAP23-1A1A580 65 aa6.99□□□□□ -1.29
H1F0-201ENST00000340857 MT2AP02795 61 aa6.98□□□□□ -1.29
H1F0-201ENST00000340857 MT1FP04733 61 aa6.95□□□□□ -1.3
H1F0-201ENST00000340857 LUZP6Q538Z0 58 aa6.94□□□□□ -1.3
H1F0-201ENST00000340857 SPRR2GQ9BYE4 73 aa6.92□□□□□ -1.3
H1F0-201ENST00000340857 KRTAP10-10P60014 251 aa6.89□□□□□ -1.31
H1F0-201ENST00000340857 KRTAP19-1Q8IUB9 90 aa6.88□□□□□ -1.31
H1F0-201ENST00000340857 SPRR5A0A1B0GTR4 108 aa6.8□□□□□ -1.32
H1F0-201ENST00000340857 KRTAP9-3Q9BYQ3 159 aa6.8□□□□□ -1.32
H1F0-201ENST00000340857 FSIP2Q5CZC0 6907 aa6.69□□□□□ -1.34
H1F0-201ENST00000340857 LCE2BO14633 110 aa6.68□□□□□ -1.34
H1F0-201ENST00000340857 LCE3AQ5TA76 89 aa6.67□□□□□ -1.34
H1F0-201ENST00000340857 USH2AO75445 5202 aa6.67□□□□□ -1.34
H1F0-201ENST00000340857 LCE2DQ5TA82 110 aaPredicted RBP6.66□□□□□ -1.34
H1F0-201ENST00000340857 A0A0A0MQY5 61 aa6.64□□□□□ -1.35
H1F0-201ENST00000340857 KRTAP9-2Q9BYQ4 174 aa6.61□□□□□ -1.35
H1F0-201ENST00000340857 KRTAP19-8Q3LI54 63 aa6.6□□□□□ -1.35
H1F0-201ENST00000340857 MT1BP07438 61 aa6.51□□□□□ -1.37
H1F0-201ENST00000340857 KRTAP8-1Q8IUC2 63 aa6.51□□□□□ -1.37
H1F0-201ENST00000340857 KRTAP10-5P60370 271 aa6.5□□□□□ -1.37
H1F0-201ENST00000340857 SSPOA2VEC9 5147 aa6.49□□□□□ -1.37
H1F0-201ENST00000340857 MT1XP80297 61 aa6.48□□□□□ -1.37
H1F0-201ENST00000340857 KRTAP10-12P60413 245 aa6.38□□□□□ -1.39
H1F0-201ENST00000340857 KRTAP12-3P60328 96 aa6.34□□□□□ -1.39
H1F0-201ENST00000340857 PRO2289Q9P1D8 64 aa6.32□□□□□ -1.4
H1F0-201ENST00000340857 CRCT1Q9UGL9 99 aa6.31□□□□□ -1.4
H1F0-201ENST00000340857 KRTAP10-7P60409 375 aaPredicted RBP6.31□□□□□ -1.4
H1F0-201ENST00000340857 KRTAP19-6Q3LI70 58 aa6.28□□□□□ -1.4
H1F0-201ENST00000340857 FCGBPQ9Y6R7 5405 aaPredicted RBP6.24□□□□□ -1.41
H1F0-201ENST00000340857 KRTAP9-6A0A140TA67 174 aa6.17□□□□□ -1.42
H1F0-201ENST00000340857 KRTAP19-5Q3LI72 72 aa6.05□□□□□ -1.44
H1F0-201ENST00000340857 INE1O15225 51 aa6.02□□□□□ -1.45
H1F0-201ENST00000340857 KMT2DO14686 5537 aa6.02□□□□□ -1.45
H1F0-201ENST00000340857 MACF1Q9UPN3 7388 aaKnown RBP6.02□□□□□ -1.45
H1F0-201ENST00000340857 LCE3CQ5T5A8 94 aa5.98□□□□□ -1.45
H1F0-201ENST00000340857 SYNE2Q8WXH0 6885 aaKnown RBP5.92□□□□□ -1.46
H1F0-201ENST00000340857 KRTAP4-8A0A0G2JLE6 195 aa5.89□□□□□ -1.47
H1F0-201ENST00000340857 KRTAP4-8Q9BYQ9 185 aa5.89□□□□□ -1.47
H1F0-201ENST00000340857 KRTAP9-1A8MXZ3 250 aaPredicted RBP5.86□□□□□ -1.47
H1F0-201ENST00000340857 KRTAP9-6A8MVA2 160 aa5.79□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 78 ms