RNA–Protein interactions for RNA: ENST00000339485.3

VMAC-201, Transcript of vimentin type intermediate filament associated coiled-coil protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VMAC, Length 2,254 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMAC-201ENST00000339485 ABCA13Q86UQ4 5058 aa10.18□□□□□ -0.78
VMAC-201ENST00000339485 CSAG1Q6PB30 78 aa10.13□□□□□ -0.79
VMAC-201ENST00000339485 DMBT1Q9UGM3 2413 aaPredicted RBP10.12□□□□□ -0.79
VMAC-201ENST00000339485 MT1HL1P0DM35 61 aa10.1□□□□□ -0.79
VMAC-201ENST00000339485 H0YAA0 97 aa10.05□□□□□ -0.8
VMAC-201ENST00000339485 A8MUU9 505 aa9.99□□□□□ -0.81
VMAC-201ENST00000339485 KRTAP3-1Q9BYR8 98 aa9.96□□□□□ -0.82
VMAC-201ENST00000339485 C9orf92A6NGG3 77 aa9.94□□□□□ -0.82
VMAC-201ENST00000339485 C20orf166-AS1Q96NR2 134 aa9.93□□□□□ -0.82
VMAC-201ENST00000339485 A0A1B0GU33 70 aa9.92□□□□□ -0.82
VMAC-201ENST00000339485 PCLOQ9Y6V0 5065 aa9.92□□□□□ -0.82
VMAC-201ENST00000339485 H1FX-AS1Q4G0G2 97 aa9.88□□□□□ -0.83
VMAC-201ENST00000339485 KRTAP25-1Q3LHN0 102 aa9.83□□□□□ -0.84
VMAC-201ENST00000339485 J3QL48 77 aa9.82□□□□□ -0.84
VMAC-201ENST00000339485 COX6B2Q6YFQ2 88 aa9.71□□□□□ -0.85
VMAC-201ENST00000339485 H3BS24 57 aa9.68□□□□□ -0.86
VMAC-201ENST00000339485 HERC1Q15751 4861 aa9.68□□□□□ -0.86
VMAC-201ENST00000339485 XP32Q5T750 250 aa9.68□□□□□ -0.86
VMAC-201ENST00000339485 K7ERS5 55 aa9.65□□□□□ -0.86
VMAC-201ENST00000339485 LPAP08519 4548 aa9.65□□□□□ -0.87
VMAC-201ENST00000339485 TPRXLQ17RH7 258 aa9.63□□□□□ -0.87
VMAC-201ENST00000339485 ROMO1P60602 79 aa9.63□□□□□ -0.87
VMAC-201ENST00000339485 RPL37P61927 97 aaKnown RBP9.61□□□□□ -0.87
VMAC-201ENST00000339485 CRIPTQ9P021 101 aa9.59□□□□□ -0.87
VMAC-201ENST00000339485 LRP2P98164 4655 aa9.58□□□□□ -0.88
VMAC-201ENST00000339485 KRTAP10-6P60371 365 aaPredicted RBP9.54□□□□□ -0.88
VMAC-201ENST00000339485 KRTAP3-3Q9BYR6 98 aa9.52□□□□□ -0.89
VMAC-201ENST00000339485 KRTAP13-4Q3LI77 160 aa9.48□□□□□ -0.89
VMAC-201ENST00000339485 HMCN2Q8NDA2 5059 aa9.44□□□□□ -0.9
VMAC-201ENST00000339485 KRTAP3-2Q9BYR7 98 aa9.44□□□□□ -0.9
VMAC-201ENST00000339485 A0A0D9SG42 100 aa9.39□□□□□ -0.91
VMAC-201ENST00000339485 P0C880 135 aa9.35□□□□□ -0.91
VMAC-201ENST00000339485 S4R3F8 94 aa9.34□□□□□ -0.91
VMAC-201ENST00000339485 SEC61BP60468 96 aaKnown RBP9.29□□□□□ -0.92
VMAC-201ENST00000339485 C10orf95Q9H7T3 257 aa9.22□□□□□ -0.93
VMAC-201ENST00000339485 MUC17Q685J3 4493 aa9.2□□□□□ -0.94
VMAC-201ENST00000339485 KRTAP12-2P59991 146 aa9.2□□□□□ -0.94
VMAC-201ENST00000339485 SPINT4Q6UDR6 99 aa9.18□□□□□ -0.94
VMAC-201ENST00000339485 KRTAP4-1Q9BYQ7 146 aa9.16□□□□□ -0.94
VMAC-201ENST00000339485 KRTAP12-1P59990 96 aa9.11□□□□□ -0.95
VMAC-201ENST00000339485 UBR4Q5T4S7 5183 aa9.1□□□□□ -0.95
VMAC-201ENST00000339485 MUC2Q02817 5179 aa9.09□□□□□ -0.95
VMAC-201ENST00000339485 KRTAP15-1Q3LI76 137 aa9.05□□□□□ -0.96
VMAC-201ENST00000339485 M0QZ58 72 aa8.97□□□□□ -0.97
VMAC-201ENST00000339485 RNF213Q63HN8 5207 aa8.96□□□□□ -0.97
VMAC-201ENST00000339485 NDUFAF8A1L188 74 aa8.9□□□□□ -0.98
VMAC-201ENST00000339485 KRTAP19-2Q3LHN2 52 aa8.88□□□□□ -0.99
VMAC-201ENST00000339485 FAT4Q6V0I7 4981 aa8.74□□□□□ -1.01
VMAC-201ENST00000339485 FLGP20930 4061 aaPredicted RBP8.7□□□□□ -1.02
VMAC-201ENST00000339485 R4GN34 69 aa8.69□□□□□ -1.02
VMAC-201ENST00000339485 LCE2CQ5TA81 110 aa8.68□□□□□ -1.02
VMAC-201ENST00000339485 LORP23490 312 aaPredicted RBP8.56□□□□□ -1.04
VMAC-201ENST00000339485 MT1HP80294 61 aa8.51□□□□□ -1.05
VMAC-201ENST00000339485 PLAC4Q8WY50 150 aa8.5□□□□□ -1.05
VMAC-201ENST00000339485 M0R2T5 61 aa8.45□□□□□ -1.06
VMAC-201ENST00000339485 PP632Q6XCG6 107 aa8.32□□□□□ -1.08
VMAC-201ENST00000339485 CAMK2N1Q7Z7J9 78 aa8.27□□□□□ -1.09
VMAC-201ENST00000339485 KRTAP9-8Q9BYQ0 159 aa8.19□□□□□ -1.1
VMAC-201ENST00000339485 MT2AP02795 61 aa8.18□□□□□ -1.1
VMAC-201ENST00000339485 LCE2AQ5TA79 106 aaPredicted RBP8.17□□□□□ -1.1
VMAC-201ENST00000339485 MT1FP04733 61 aa8.14□□□□□ -1.11
VMAC-201ENST00000339485 LUZP6Q538Z0 58 aa8.14□□□□□ -1.11
VMAC-201ENST00000339485 KRTAP10-10P60014 251 aa8.11□□□□□ -1.11
VMAC-201ENST00000339485 TNP1P09430 55 aa8□□□□□ -1.13
VMAC-201ENST00000339485 KRTAP23-1A1A580 65 aa7.99□□□□□ -1.13
VMAC-201ENST00000339485 KRTAP19-1Q8IUB9 90 aa7.99□□□□□ -1.13
VMAC-201ENST00000339485 SPRR2GQ9BYE4 73 aa7.99□□□□□ -1.13
VMAC-201ENST00000339485 A0A0A0MQY5 61 aa7.91□□□□□ -1.14
VMAC-201ENST00000339485 SPRR5A0A1B0GTR4 108 aa7.91□□□□□ -1.14
VMAC-201ENST00000339485 KRTAP9-3Q9BYQ3 159 aa7.88□□□□□ -1.15
VMAC-201ENST00000339485 KRTAP19-8Q3LI54 63 aa7.76□□□□□ -1.17
VMAC-201ENST00000339485 MT1BP07438 61 aa7.69□□□□□ -1.18
VMAC-201ENST00000339485 LCE2BO14633 110 aa7.69□□□□□ -1.18
VMAC-201ENST00000339485 USH2AO75445 5202 aa7.61□□□□□ -1.19
VMAC-201ENST00000339485 LCE3AQ5TA76 89 aa7.57□□□□□ -1.2
VMAC-201ENST00000339485 FSIP2Q5CZC0 6907 aa7.52□□□□□ -1.21
VMAC-201ENST00000339485 MT1XP80297 61 aa7.45□□□□□ -1.22
VMAC-201ENST00000339485 KRTAP10-5P60370 271 aa7.44□□□□□ -1.22
VMAC-201ENST00000339485 SSPOA2VEC9 5147 aa7.4□□□□□ -1.22
VMAC-201ENST00000339485 KRTAP8-1Q8IUC2 63 aa7.4□□□□□ -1.23
VMAC-201ENST00000339485 LCE2DQ5TA82 110 aaPredicted RBP7.38□□□□□ -1.23
VMAC-201ENST00000339485 PRO2289Q9P1D8 64 aa7.33□□□□□ -1.24
VMAC-201ENST00000339485 KRTAP9-2Q9BYQ4 174 aa7.29□□□□□ -1.24
VMAC-201ENST00000339485 KRTAP12-3P60328 96 aa7.19□□□□□ -1.26
VMAC-201ENST00000339485 KRTAP10-7P60409 375 aaPredicted RBP7.18□□□□□ -1.26
VMAC-201ENST00000339485 KRTAP19-6Q3LI70 58 aa7.17□□□□□ -1.26
VMAC-201ENST00000339485 KRTAP10-12P60413 245 aa7.17□□□□□ -1.26
VMAC-201ENST00000339485 INE1O15225 51 aa7.15□□□□□ -1.27
VMAC-201ENST00000339485 FCGBPQ9Y6R7 5405 aaPredicted RBP7.05□□□□□ -1.28
VMAC-201ENST00000339485 KMT2DO14686 5537 aa7.01□□□□□ -1.29
VMAC-201ENST00000339485 CRCT1Q9UGL9 99 aa6.97□□□□□ -1.29
VMAC-201ENST00000339485 KRTAP4-8A0A0G2JLE6 195 aa6.91□□□□□ -1.3
VMAC-201ENST00000339485 KRTAP4-8Q9BYQ9 185 aa6.91□□□□□ -1.3
VMAC-201ENST00000339485 KRTAP19-5Q3LI72 72 aa6.8□□□□□ -1.32
VMAC-201ENST00000339485 LCE3CQ5T5A8 94 aa6.8□□□□□ -1.32
VMAC-201ENST00000339485 MACF1Q9UPN3 7388 aaKnown RBP6.76□□□□□ -1.33
VMAC-201ENST00000339485 KRTAP9-6A0A140TA67 174 aa6.74□□□□□ -1.33
VMAC-201ENST00000339485 KRTAP19-7Q3SYF9 63 aa6.65□□□□□ -1.34
VMAC-201ENST00000339485 SYNE2Q8WXH0 6885 aaKnown RBP6.64□□□□□ -1.35
VMAC-201ENST00000339485 KRTAP9-6A8MVA2 160 aa6.61□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 109 ms