RNA–Protein interactions for RNA: ENST00000339113.8

ATAD3A-201, Transcript of ATPase family, AAA domain containing 3A, humanhuman

TSL 2

Gene ATAD3A, Length 2,330 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATAD3A-201ENST00000339113 UQCR11O14957 56 aa9.25□□□□□ -0.93
ATAD3A-201ENST00000339113 MIR22HGQ0VDD5 57 aa9.21□□□□□ -0.94
ATAD3A-201ENST00000339113 ABCA13Q86UQ4 5058 aa9.19□□□□□ -0.94
ATAD3A-201ENST00000339113 BIRC6Q9NR09 4857 aa9.16□□□□□ -0.94
ATAD3A-201ENST00000339113 HERC2O95714 4834 aa9.12□□□□□ -0.95
ATAD3A-201ENST00000339113 XP32Q5T750 250 aa9.11□□□□□ -0.95
ATAD3A-201ENST00000339113 PRAC1Q96KF2 57 aa9.11□□□□□ -0.95
ATAD3A-201ENST00000339113 ADM2Q7Z4H4 148 aa9.07□□□□□ -0.96
ATAD3A-201ENST00000339113 RPL37P61927 97 aaKnown RBP9.06□□□□□ -0.96
ATAD3A-201ENST00000339113 LINC01554Q52M75 96 aa9□□□□□ -0.97
ATAD3A-201ENST00000339113 LPAP08519 4548 aa8.99□□□□□ -0.97
ATAD3A-201ENST00000339113 TPRXLQ17RH7 258 aa8.97□□□□□ -0.97
ATAD3A-201ENST00000339113 J3QL48 77 aa8.96□□□□□ -0.97
ATAD3A-201ENST00000339113 LRP2P98164 4655 aa8.96□□□□□ -0.98
ATAD3A-201ENST00000339113 KRTAP3-1Q9BYR8 98 aa8.94□□□□□ -0.98
ATAD3A-201ENST00000339113 CSAG1Q6PB30 78 aa8.87□□□□□ -0.99
ATAD3A-201ENST00000339113 H0YAA0 97 aa8.84□□□□□ -0.99
ATAD3A-201ENST00000339113 COX6B2Q6YFQ2 88 aa8.83□□□□□ -1
ATAD3A-201ENST00000339113 PCLOQ9Y6V0 5065 aa8.79□□□□□ -1
ATAD3A-201ENST00000339113 A0A1B0GU33 70 aa8.79□□□□□ -1
ATAD3A-201ENST00000339113 H1FX-AS1Q4G0G2 97 aa8.74□□□□□ -1.01
ATAD3A-201ENST00000339113 HERC1Q15751 4861 aa8.69□□□□□ -1.02
ATAD3A-201ENST00000339113 KRTAP25-1Q3LHN0 102 aa8.66□□□□□ -1.02
ATAD3A-201ENST00000339113 SEC61BP60468 96 aaKnown RBP8.63□□□□□ -1.03
ATAD3A-201ENST00000339113 KRTAP4-1Q9BYQ7 146 aa8.6□□□□□ -1.03
ATAD3A-201ENST00000339113 KRTAP3-3Q9BYR6 98 aa8.6□□□□□ -1.03
ATAD3A-201ENST00000339113 K7ERS5 55 aa8.58□□□□□ -1.04
ATAD3A-201ENST00000339113 MUC17Q685J3 4493 aa8.58□□□□□ -1.04
ATAD3A-201ENST00000339113 HMCN2Q8NDA2 5059 aa8.55□□□□□ -1.04
ATAD3A-201ENST00000339113 S4R3F8 94 aa8.53□□□□□ -1.04
ATAD3A-201ENST00000339113 ROMO1P60602 79 aa8.46□□□□□ -1.06
ATAD3A-201ENST00000339113 MUC2Q02817 5179 aa8.44□□□□□ -1.06
ATAD3A-201ENST00000339113 KRTAP10-6P60371 365 aaPredicted RBP8.44□□□□□ -1.06
ATAD3A-201ENST00000339113 KRTAP19-2Q3LHN2 52 aa8.38□□□□□ -1.07
ATAD3A-201ENST00000339113 KRTAP3-2Q9BYR7 98 aa8.35□□□□□ -1.07
ATAD3A-201ENST00000339113 KRTAP13-4Q3LI77 160 aa8.33□□□□□ -1.08
ATAD3A-201ENST00000339113 CRIPTQ9P021 101 aa8.31□□□□□ -1.08
ATAD3A-201ENST00000339113 A0A0A0MQY5 61 aa8.3□□□□□ -1.08
ATAD3A-201ENST00000339113 P0C880 135 aa8.26□□□□□ -1.09
ATAD3A-201ENST00000339113 A0A0D9SG42 100 aa8.23□□□□□ -1.09
ATAD3A-201ENST00000339113 UBR4Q5T4S7 5183 aa8.2□□□□□ -1.1
ATAD3A-201ENST00000339113 FLGP20930 4061 aaPredicted RBP8.15□□□□□ -1.1
ATAD3A-201ENST00000339113 RNF213Q63HN8 5207 aa8.13□□□□□ -1.11
ATAD3A-201ENST00000339113 LCE2CQ5TA81 110 aa8.09□□□□□ -1.11
ATAD3A-201ENST00000339113 KRTAP12-2P59991 146 aa8.08□□□□□ -1.12
ATAD3A-201ENST00000339113 FAT4Q6V0I7 4981 aa8.06□□□□□ -1.12
ATAD3A-201ENST00000339113 KRTAP12-1P59990 96 aa8.05□□□□□ -1.12
ATAD3A-201ENST00000339113 SPINT4Q6UDR6 99 aa8.05□□□□□ -1.12
ATAD3A-201ENST00000339113 M0QZ58 72 aa8.03□□□□□ -1.12
ATAD3A-201ENST00000339113 C10orf95Q9H7T3 257 aa8.02□□□□□ -1.13
ATAD3A-201ENST00000339113 LORP23490 312 aaPredicted RBP7.99□□□□□ -1.13
ATAD3A-201ENST00000339113 KRTAP15-1Q3LI76 137 aa7.96□□□□□ -1.14
ATAD3A-201ENST00000339113 MT1HP80294 61 aa7.89□□□□□ -1.15
ATAD3A-201ENST00000339113 R4GN34 69 aa7.89□□□□□ -1.15
ATAD3A-201ENST00000339113 M0R2T5 61 aa7.81□□□□□ -1.16
ATAD3A-201ENST00000339113 NDUFAF8A1L188 74 aa7.79□□□□□ -1.16
ATAD3A-201ENST00000339113 KRTAP9-8Q9BYQ0 159 aa7.65□□□□□ -1.18
ATAD3A-201ENST00000339113 MT2AP02795 61 aa7.63□□□□□ -1.19
ATAD3A-201ENST00000339113 MT1FP04733 61 aa7.61□□□□□ -1.19
ATAD3A-201ENST00000339113 KRTAP10-10P60014 251 aa7.57□□□□□ -1.2
ATAD3A-201ENST00000339113 KRTAP19-1Q8IUB9 90 aa7.56□□□□□ -1.2
ATAD3A-201ENST00000339113 LUZP6Q538Z0 58 aa7.55□□□□□ -1.2
ATAD3A-201ENST00000339113 SPRR2GQ9BYE4 73 aa7.53□□□□□ -1.2
ATAD3A-201ENST00000339113 PLAC4Q8WY50 150 aa7.5□□□□□ -1.21
ATAD3A-201ENST00000339113 PP632Q6XCG6 107 aa7.46□□□□□ -1.22
ATAD3A-201ENST00000339113 LCE2AQ5TA79 106 aaPredicted RBP7.43□□□□□ -1.22
ATAD3A-201ENST00000339113 CAMK2N1Q7Z7J9 78 aa7.4□□□□□ -1.22
ATAD3A-201ENST00000339113 KRTAP9-3Q9BYQ3 159 aa7.35□□□□□ -1.23
ATAD3A-201ENST00000339113 KRTAP19-8Q3LI54 63 aa7.3□□□□□ -1.24
ATAD3A-201ENST00000339113 MT1BP07438 61 aa7.25□□□□□ -1.25
ATAD3A-201ENST00000339113 KRTAP23-1A1A580 65 aa7.22□□□□□ -1.25
ATAD3A-201ENST00000339113 LCE2BO14633 110 aa7.15□□□□□ -1.26
ATAD3A-201ENST00000339113 TNP1P09430 55 aa7.13□□□□□ -1.27
ATAD3A-201ENST00000339113 MT1XP80297 61 aa7.06□□□□□ -1.28
ATAD3A-201ENST00000339113 KRTAP10-5P60370 271 aa7.05□□□□□ -1.28
ATAD3A-201ENST00000339113 SPRR5A0A1B0GTR4 108 aa7.04□□□□□ -1.28
ATAD3A-201ENST00000339113 USH2AO75445 5202 aa7□□□□□ -1.29
ATAD3A-201ENST00000339113 PRO2289Q9P1D8 64 aa6.83□□□□□ -1.32
ATAD3A-201ENST00000339113 KRTAP10-7P60409 375 aaPredicted RBP6.82□□□□□ -1.32
ATAD3A-201ENST00000339113 LCE3AQ5TA76 89 aa6.81□□□□□ -1.32
ATAD3A-201ENST00000339113 KRTAP10-12P60413 245 aa6.71□□□□□ -1.34
ATAD3A-201ENST00000339113 SSPOA2VEC9 5147 aa6.7□□□□□ -1.34
ATAD3A-201ENST00000339113 FSIP2Q5CZC0 6907 aa6.66□□□□□ -1.34
ATAD3A-201ENST00000339113 KRTAP8-1Q8IUC2 63 aa6.62□□□□□ -1.35
ATAD3A-201ENST00000339113 LCE2DQ5TA82 110 aaPredicted RBP6.59□□□□□ -1.35
ATAD3A-201ENST00000339113 KMT2DO14686 5537 aa6.59□□□□□ -1.35
ATAD3A-201ENST00000339113 KRTAP19-6Q3LI70 58 aa6.58□□□□□ -1.36
ATAD3A-201ENST00000339113 KRTAP4-8A0A0G2JLE6 195 aa6.54□□□□□ -1.36
ATAD3A-201ENST00000339113 KRTAP4-8Q9BYQ9 185 aa6.54□□□□□ -1.36
ATAD3A-201ENST00000339113 KRTAP12-3P60328 96 aa6.49□□□□□ -1.37
ATAD3A-201ENST00000339113 KRTAP19-5Q3LI72 72 aa6.43□□□□□ -1.38
ATAD3A-201ENST00000339113 FCGBPQ9Y6R7 5405 aaPredicted RBP6.37□□□□□ -1.39
ATAD3A-201ENST00000339113 INE1O15225 51 aa6.37□□□□□ -1.39
ATAD3A-201ENST00000339113 KRTAP19-7Q3SYF9 63 aa6.3□□□□□ -1.4
ATAD3A-201ENST00000339113 KRTAP9-2Q9BYQ4 174 aa6.3□□□□□ -1.4
ATAD3A-201ENST00000339113 MT1EP04732 61 aa6.15□□□□□ -1.43
ATAD3A-201ENST00000339113 CRCT1Q9UGL9 99 aa6.09□□□□□ -1.43
ATAD3A-201ENST00000339113 LCE3CQ5T5A8 94 aa6.08□□□□□ -1.44
ATAD3A-201ENST00000339113 MT1LQ93083 61 aa6.06□□□□□ -1.44
ATAD3A-201ENST00000339113 MACF1Q9UPN3 7388 aaKnown RBP6.03□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 106.1 ms