RNA–Protein interactions for RNA: ENST00000338193.10

PRIM1-201, Transcript of DNA primase subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRIM1, Length 1,393 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRIM1-201ENST00000338193 RBM12B-AS1Q9P1G2 102 aa6.24□□□□□ -1.41
PRIM1-201ENST00000338193 C4orf26Q17RF5 130 aa6.23□□□□□ -1.41
PRIM1-201ENST00000338193 CYP4F30PQ9H0H9 118 aa6.22□□□□□ -1.41
PRIM1-201ENST00000338193 SCGB1A1P11684 91 aa6.21□□□□□ -1.41
PRIM1-201ENST00000338193 KRTAP15-1Q3LI76 137 aa6.18□□□□□ -1.42
PRIM1-201ENST00000338193 LINC00208Q96KT6 92 aa6.18□□□□□ -1.42
PRIM1-201ENST00000338193 LOC101927531A0A1B0GV80 90 aa6.18□□□□□ -1.42
PRIM1-201ENST00000338193 KLKP1Q107X0 134 aa6.18□□□□□ -1.42
PRIM1-201ENST00000338193 C1orf64Q8NEQ6 169 aa6.17□□□□□ -1.42
PRIM1-201ENST00000338193 M0R2T5 61 aa6.15□□□□□ -1.43
PRIM1-201ENST00000338193 ATOX1O00244 68 aa6.15□□□□□ -1.43
PRIM1-201ENST00000338193 KRTAP10-6P60371 365 aaPredicted RBP6.15□□□□□ -1.43
PRIM1-201ENST00000338193 C5orf47Q569G3 176 aa6.14□□□□□ -1.43
PRIM1-201ENST00000338193 TRAV7A0A075B6U4 112 aa6.13□□□□□ -1.43
PRIM1-201ENST00000338193 MP68P56378 58 aa6.12□□□□□ -1.43
PRIM1-201ENST00000338193 H1FX-AS1Q4G0G2 97 aa6.12□□□□□ -1.43
PRIM1-201ENST00000338193 SMIM20Q8N5G0 67 aa6.06□□□□□ -1.44
PRIM1-201ENST00000338193 H3BPC8 53 aa6.06□□□□□ -1.44
PRIM1-201ENST00000338193 KRTAP5-6Q6L8G9 129 aaPredicted RBP6.05□□□□□ -1.44
PRIM1-201ENST00000338193 SERP2Q8N6R1 65 aa6.05□□□□□ -1.44
PRIM1-201ENST00000338193 SNURFQ9Y675 71 aa6.05□□□□□ -1.44
PRIM1-201ENST00000338193 LCA10Q71F78 164 aa6.01□□□□□ -1.45
PRIM1-201ENST00000338193 MT2AP02795 61 aa6□□□□□ -1.45
PRIM1-201ENST00000338193 C20orf197Q8N268 126 aa6□□□□□ -1.45
PRIM1-201ENST00000338193 S4R3F8 94 aa5.99□□□□□ -1.45
PRIM1-201ENST00000338193 MT1FP04733 61 aa5.97□□□□□ -1.45
PRIM1-201ENST00000338193 CYSTM1Q9H1C7 97 aa5.96□□□□□ -1.45
PRIM1-201ENST00000338193 COX7CP15954 63 aa5.95□□□□□ -1.46
PRIM1-201ENST00000338193 DMAC1Q96GE9 116 aa5.93□□□□□ -1.46
PRIM1-201ENST00000338193 A8MUN3 132 aa5.91□□□□□ -1.46
PRIM1-201ENST00000338193 ANAPC13Q9BS18 74 aa5.91□□□□□ -1.46
PRIM1-201ENST00000338193 CCDC179H3BU77 68 aa5.87□□□□□ -1.47
PRIM1-201ENST00000338193 KRTAP10-10P60014 251 aa5.87□□□□□ -1.47
PRIM1-201ENST00000338193 CSAG1Q6PB30 78 aa5.86□□□□□ -1.47
PRIM1-201ENST00000338193 H7BZZ5 65 aa5.83□□□□□ -1.48
PRIM1-201ENST00000338193 KRTAP5-11Q6L8G4 156 aa5.82□□□□□ -1.48
PRIM1-201ENST00000338193 NDUFC1O43677 76 aa5.81□□□□□ -1.48
PRIM1-201ENST00000338193 SPANXA2-OT1Q8N9U9 137 aa5.81□□□□□ -1.48
PRIM1-201ENST00000338193 ACYP2P14621 99 aa5.79□□□□□ -1.48
PRIM1-201ENST00000338193 KRTAP10-7P60409 375 aaPredicted RBP5.78□□□□□ -1.48
PRIM1-201ENST00000338193 KRTAP23-1A1A580 65 aa5.72□□□□□ -1.49
PRIM1-201ENST00000338193 USH2AO75445 5202 aa5.71□□□□□ -1.5
PRIM1-201ENST00000338193 ADM2Q7Z4H4 148 aa5.7□□□□□ -1.5
PRIM1-201ENST00000338193 COA5Q86WW8 74 aa5.7□□□□□ -1.5
PRIM1-201ENST00000338193 FSIP2Q5CZC0 6907 aa5.69□□□□□ -1.5
PRIM1-201ENST00000338193 H0YAA0 97 aa5.68□□□□□ -1.5
PRIM1-201ENST00000338193 CHKB-CPT1BH3BT56 60 aa5.67□□□□□ -1.5
PRIM1-201ENST00000338193 P0C880 135 aa5.67□□□□□ -1.5
PRIM1-201ENST00000338193 LCE1AQ5T7P2 110 aa5.62□□□□□ -1.51
PRIM1-201ENST00000338193 SPRR2GQ9BYE4 73 aa5.62□□□□□ -1.51
PRIM1-201ENST00000338193 SSPOA2VEC9 5147 aa5.61□□□□□ -1.51
PRIM1-201ENST00000338193 CRCT1Q9UGL9 99 aa5.6□□□□□ -1.51
PRIM1-201ENST00000338193 SPTSSBQ8NFR3 76 aa5.58□□□□□ -1.52
PRIM1-201ENST00000338193 MT1BP07438 61 aa5.57□□□□□ -1.52
PRIM1-201ENST00000338193 KRTAP19-8Q3LI54 63 aa5.55□□□□□ -1.52
PRIM1-201ENST00000338193 TMEM258P61165 79 aa5.55□□□□□ -1.52
PRIM1-201ENST00000338193 CRIPTQ9P021 101 aa5.54□□□□□ -1.52
PRIM1-201ENST00000338193 ATP5EP56381 51 aaPredicted RBP5.53□□□□□ -1.52
PRIM1-201ENST00000338193 PCP4P48539 62 aa5.51□□□□□ -1.53
PRIM1-201ENST00000338193 M0QZ58 72 aa5.49□□□□□ -1.53
PRIM1-201ENST00000338193 Q5VV11 94 aa5.47□□□□□ -1.53
PRIM1-201ENST00000338193 R4GN34 69 aa5.47□□□□□ -1.53
PRIM1-201ENST00000338193 KRTAP19-6Q3LI70 58 aa5.46□□□□□ -1.54
PRIM1-201ENST00000338193 KRTAP13-4Q3LI77 160 aa5.46□□□□□ -1.54
PRIM1-201ENST00000338193 FCGBPQ9Y6R7 5405 aaPredicted RBP5.43□□□□□ -1.54
PRIM1-201ENST00000338193 LINC01554Q52M75 96 aa5.41□□□□□ -1.54
PRIM1-201ENST00000338193 SERP1Q9Y6X1 66 aa5.39□□□□□ -1.55
PRIM1-201ENST00000338193 LCE1EQ5T753 118 aa5.38□□□□□ -1.55
PRIM1-201ENST00000338193 KRTAP2-2Q9BYT5 123 aa5.36□□□□□ -1.55
PRIM1-201ENST00000338193 A0A1B0GU69 56 aa5.35□□□□□ -1.55
PRIM1-201ENST00000338193 SEC61GP60059 68 aa5.34□□□□□ -1.55
PRIM1-201ENST00000338193 SPATA8Q6RVD6 105 aa5.34□□□□□ -1.55
PRIM1-201ENST00000338193 LINC01558Q9Y6Z2 57 aa5.33□□□□□ -1.56
PRIM1-201ENST00000338193 KRTAP10-5P60370 271 aa5.32□□□□□ -1.56
PRIM1-201ENST00000338193 A0A0A0MQY5 61 aa5.31□□□□□ -1.56
PRIM1-201ENST00000338193 A0A1B0GU33 70 aa5.31□□□□□ -1.56
PRIM1-201ENST00000338193 MT1XP80297 61 aa5.29□□□□□ -1.56
PRIM1-201ENST00000338193 A6NN06 94 aa5.28□□□□□ -1.56
PRIM1-201ENST00000338193 PLAC4Q8WY50 150 aa5.28□□□□□ -1.56
PRIM1-201ENST00000338193 A0A0D9SG42 100 aa5.26□□□□□ -1.57
PRIM1-201ENST00000338193 A8MU10 97 aa5.23□□□□□ -1.57
PRIM1-201ENST00000338193 PRR15LQ9BU68 103 aa5.23□□□□□ -1.57
PRIM1-201ENST00000338193 MACF1Q9UPN3 7388 aaKnown RBP5.23□□□□□ -1.57
PRIM1-201ENST00000338193 KRTAP5-1Q6L8H4 278 aa5.2□□□□□ -1.58
PRIM1-201ENST00000338193 KRTAP12-1P59990 96 aa5.18□□□□□ -1.58
PRIM1-201ENST00000338193 Q1T7F1 81 aa5.18□□□□□ -1.58
PRIM1-201ENST00000338193 SMIM26A0A096LP01 95 aa5.17□□□□□ -1.58
PRIM1-201ENST00000338193 PSPHP1O15172 72 aa5.17□□□□□ -1.58
PRIM1-201ENST00000338193 KRTAP12-2P59991 146 aa5.16□□□□□ -1.58
PRIM1-201ENST00000338193 RPS28P62857 69 aaKnown RBP5.16□□□□□ -1.58
PRIM1-201ENST00000338193 SPINT4Q6UDR6 99 aa5.13□□□□□ -1.59
PRIM1-201ENST00000338193 PRO2289Q9P1D8 64 aa5.12□□□□□ -1.59
PRIM1-201ENST00000338193 V9GYY9 64 aa5.11□□□□□ -1.59
PRIM1-201ENST00000338193 UQCR11O14957 56 aa5.08□□□□□ -1.6
PRIM1-201ENST00000338193 KRTAP5-9P26371 169 aa5.07□□□□□ -1.6
PRIM1-201ENST00000338193 KRTAP5-4Q6L8H1 288 aa5.07□□□□□ -1.6
PRIM1-201ENST00000338193 CAMK2N1Q7Z7J9 78 aa5.07□□□□□ -1.6
PRIM1-201ENST00000338193 SYNE2Q8WXH0 6885 aaKnown RBP5.07□□□□□ -1.6
PRIM1-201ENST00000338193 KMT2DO14686 5537 aa5.04□□□□□ -1.6
PRIM1-201ENST00000338193 MIR22HGQ0VDD5 57 aa5.04□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 11.1 ms