RNA–Protein interactions for RNA: ENST00000337571.8

CAPN3-202, Transcript of calpain 3, humanhuman

TSL 1 (best) BASIC

Gene CAPN3, Length 1,271 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-202ENST00000337571 IGKV2D-30A0A075B6S6 120 aa5.05□□□□□ -1.6
CAPN3-202ENST00000337571 K7EQZ3 153 aa5.05□□□□□ -1.6
CAPN3-202ENST00000337571 IGKV2-30P06310 120 aa5.05□□□□□ -1.6
CAPN3-202ENST00000337571 MACF1Q9UPN3 7388 aaKnown RBP5.04□□□□□ -1.6
CAPN3-202ENST00000337571 SCGB1A1P11684 91 aa5.04□□□□□ -1.6
CAPN3-202ENST00000337571 C7orf65Q6ZTY9 151 aa5.03□□□□□ -1.6
CAPN3-202ENST00000337571 FAM236AA0A1B0GUQ0 79 aa5□□□□□ -1.61
CAPN3-202ENST00000337571 FAM236BA0A1B0GV22 79 aa5□□□□□ -1.61
CAPN3-202ENST00000337571 CASC2Q6XLA1 102 aa5□□□□□ -1.61
CAPN3-202ENST00000337571 Q5W150 140 aa4.99□□□□□ -1.61
CAPN3-202ENST00000337571 HCG22E2RYF7 251 aa4.98□□□□□ -1.61
CAPN3-202ENST00000337571 SYNE2Q8WXH0 6885 aaKnown RBP4.97□□□□□ -1.61
CAPN3-202ENST00000337571 C4orf26Q17RF5 130 aa4.97□□□□□ -1.61
CAPN3-202ENST00000337571 PCP4P48539 62 aa4.93□□□□□ -1.62
CAPN3-202ENST00000337571 C5orf47Q569G3 176 aa4.93□□□□□ -1.62
CAPN3-202ENST00000337571 OCR1Q9BZK8 76 aa4.92□□□□□ -1.62
CAPN3-202ENST00000337571 ATOX1O00244 68 aa4.91□□□□□ -1.62
CAPN3-202ENST00000337571 KRTAP6-3Q3LI67 103 aa4.9□□□□□ -1.63
CAPN3-202ENST00000337571 CCDC179H3BU77 68 aa4.89□□□□□ -1.63
CAPN3-202ENST00000337571 CSAG1Q6PB30 78 aa4.89□□□□□ -1.63
CAPN3-202ENST00000337571 ANAPC13Q9BS18 74 aa4.89□□□□□ -1.63
CAPN3-202ENST00000337571 S4R3F8 94 aa4.89□□□□□ -1.63
CAPN3-202ENST00000337571 TRAV7A0A075B6U4 112 aa4.88□□□□□ -1.63
CAPN3-202ENST00000337571 SERP2Q8N6R1 65 aa4.88□□□□□ -1.63
CAPN3-202ENST00000337571 COX7CP15954 63 aa4.87□□□□□ -1.63
CAPN3-202ENST00000337571 C1orf64Q8NEQ6 169 aa4.87□□□□□ -1.63
CAPN3-202ENST00000337571 CYSTM1Q9H1C7 97 aa4.85□□□□□ -1.63
CAPN3-202ENST00000337571 TP53AIP1Q9HCN2 124 aa4.85□□□□□ -1.63
CAPN3-202ENST00000337571 A6NN06 94 aa4.84□□□□□ -1.63
CAPN3-202ENST00000337571 Q5VV11 94 aa4.84□□□□□ -1.63
CAPN3-202ENST00000337571 LCA10Q71F78 164 aa4.83□□□□□ -1.64
CAPN3-202ENST00000337571 SMIM20Q8N5G0 67 aa4.83□□□□□ -1.64
CAPN3-202ENST00000337571 UQCRQO14949 82 aa4.82□□□□□ -1.64
CAPN3-202ENST00000337571 SPRR2GQ9BYE4 73 aa4.79□□□□□ -1.64
CAPN3-202ENST00000337571 C20orf197Q8N268 126 aa4.78□□□□□ -1.64
CAPN3-202ENST00000337571 MT1BP07438 61 aa4.77□□□□□ -1.65
CAPN3-202ENST00000337571 KLKP1Q107X0 134 aa4.77□□□□□ -1.65
CAPN3-202ENST00000337571 SNURFQ9Y675 71 aa4.77□□□□□ -1.65
CAPN3-202ENST00000337571 H0Y9P7 68 aa4.76□□□□□ -1.65
CAPN3-202ENST00000337571 KRTAP19-8Q3LI54 63 aa4.76□□□□□ -1.65
CAPN3-202ENST00000337571 CYP4F30PQ9H0H9 118 aa4.74□□□□□ -1.65
CAPN3-202ENST00000337571 TRAV22A0A0B4J277 110 aa4.73□□□□□ -1.65
CAPN3-202ENST00000337571 LINC00208Q96KT6 92 aa4.73□□□□□ -1.65
CAPN3-202ENST00000337571 CRIPTQ9P021 101 aa4.73□□□□□ -1.65
CAPN3-202ENST00000337571 H7BZZ5 65 aa4.72□□□□□ -1.65
CAPN3-202ENST00000337571 KRTAP10-5P60370 271 aa4.72□□□□□ -1.65
CAPN3-202ENST00000337571 LCE1AQ5T7P2 110 aa4.72□□□□□ -1.65
CAPN3-202ENST00000337571 LOC101927531A0A1B0GV80 90 aa4.7□□□□□ -1.66
CAPN3-202ENST00000337571 H3BPC8 53 aa4.7□□□□□ -1.66
CAPN3-202ENST00000337571 MP68P56378 58 aa4.69□□□□□ -1.66
CAPN3-202ENST00000337571 NDUFC1O43677 76 aa4.67□□□□□ -1.66
CAPN3-202ENST00000337571 MUC12Q9UKN1 5478 aa4.67□□□□□ -1.66
CAPN3-202ENST00000337571 NEBP20929 6669 aa4.65□□□□□ -1.67
CAPN3-202ENST00000337571 KRTAP20-1Q3LI63 56 aa4.62□□□□□ -1.67
CAPN3-202ENST00000337571 TMEM258P61165 79 aa4.61□□□□□ -1.67
CAPN3-202ENST00000337571 H0YAA0 97 aa4.6□□□□□ -1.67
CAPN3-202ENST00000337571 KRTAP5-9P26371 169 aa4.6□□□□□ -1.67
CAPN3-202ENST00000337571 A8MUN3 132 aa4.59□□□□□ -1.67
CAPN3-202ENST00000337571 ADM2Q7Z4H4 148 aa4.58□□□□□ -1.68
CAPN3-202ENST00000337571 SPANXA2-OT1Q8N9U9 137 aa4.58□□□□□ -1.68
CAPN3-202ENST00000337571 PRO2289Q9P1D8 64 aa4.57□□□□□ -1.68
CAPN3-202ENST00000337571 PLAC4Q8WY50 150 aa4.55□□□□□ -1.68
CAPN3-202ENST00000337571 MDN1Q9NU22 5596 aa4.54□□□□□ -1.68
CAPN3-202ENST00000337571 KMT2DO14686 5537 aa4.53□□□□□ -1.68
CAPN3-202ENST00000337571 ATP5EP56381 51 aaPredicted RBP4.52□□□□□ -1.69
CAPN3-202ENST00000337571 DMAC1Q96GE9 116 aa4.51□□□□□ -1.69
CAPN3-202ENST00000337571 R4GN34 69 aa4.5□□□□□ -1.69
CAPN3-202ENST00000337571 RPS28P62857 69 aaKnown RBP4.49□□□□□ -1.69
CAPN3-202ENST00000337571 SPRR2FQ96RM1 72 aa4.49□□□□□ -1.69
CAPN3-202ENST00000337571 SERP1Q9Y6X1 66 aa4.49□□□□□ -1.69
CAPN3-202ENST00000337571 KRTAP2-3P0C7H8 128 aa4.48□□□□□ -1.69
CAPN3-202ENST00000337571 KRTAP2-4Q9BYR9 128 aa4.48□□□□□ -1.69
CAPN3-202ENST00000337571 COA5Q86WW8 74 aa4.46□□□□□ -1.7
CAPN3-202ENST00000337571 SPRR2EP22531 72 aa4.45□□□□□ -1.7
CAPN3-202ENST00000337571 SPRR2BP35325 72 aa4.45□□□□□ -1.7
CAPN3-202ENST00000337571 SPRR2AP35326 72 aa4.45□□□□□ -1.7
CAPN3-202ENST00000337571 MT1XP80297 61 aa4.45□□□□□ -1.7
CAPN3-202ENST00000337571 M0QZ58 72 aa4.44□□□□□ -1.7
CAPN3-202ENST00000337571 KRTAP8-1Q8IUC2 63 aa4.44□□□□□ -1.7
CAPN3-202ENST00000337571 ACYP2P14621 99 aa4.43□□□□□ -1.7
CAPN3-202ENST00000337571 P0C880 135 aa4.42□□□□□ -1.7
CAPN3-202ENST00000337571 LINC01554Q52M75 96 aa4.4□□□□□ -1.71
CAPN3-202ENST00000337571 KRTAP2-2Q9BYT5 123 aa4.4□□□□□ -1.71
CAPN3-202ENST00000337571 KRTAP12-2P59991 146 aa4.39□□□□□ -1.71
CAPN3-202ENST00000337571 SMIM26A0A096LP01 95 aa4.36□□□□□ -1.71
CAPN3-202ENST00000337571 SVIPQ8NHG7 77 aa4.36□□□□□ -1.71
CAPN3-202ENST00000337571 KRTAP2-1Q9BYU5 128 aa4.33□□□□□ -1.72
CAPN3-202ENST00000337571 SPTSSBQ8NFR3 76 aa4.32□□□□□ -1.72
CAPN3-202ENST00000337571 SPRR2DP22532 72 aa4.31□□□□□ -1.72
CAPN3-202ENST00000337571 Q1T7F1 81 aa4.31□□□□□ -1.72
CAPN3-202ENST00000337571 CHKB-CPT1BH3BT56 60 aa4.3□□□□□ -1.72
CAPN3-202ENST00000337571 LINC01558Q9Y6Z2 57 aa4.3□□□□□ -1.72
CAPN3-202ENST00000337571 A0A0A0MQY5 61 aa4.29□□□□□ -1.72
CAPN3-202ENST00000337571 KRTAP10-7P60409 375 aaPredicted RBP4.25□□□□□ -1.73
CAPN3-202ENST00000337571 KRTAP10-12P60413 245 aa4.25□□□□□ -1.73
CAPN3-202ENST00000337571 PSPHP1O15172 72 aa4.21□□□□□ -1.74
CAPN3-202ENST00000337571 PRR15LQ9BU68 103 aa4.2□□□□□ -1.74
CAPN3-202ENST00000337571 V9GYY9 64 aa4.2□□□□□ -1.74
CAPN3-202ENST00000337571 MT3P25713 68 aa4.16□□□□□ -1.74
CAPN3-202ENST00000337571 A0A1B0GU69 56 aa4.15□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms