RNA–Protein interactions for RNA: ENST00000335071.3

FOXE3-201, Transcript of forkhead box E3, humanhuman

APPRIS P1 BASIC

Gene FOXE3, Length 1,981 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXE3-201ENST00000335071 SVIPQ8NHG7 77 aa13.3□□□□□ -0.28
FOXE3-201ENST00000335071 A8MU10 97 aa13.27□□□□□ -0.29
FOXE3-201ENST00000335071 LCA10Q71F78 164 aa13.25□□□□□ -0.29
FOXE3-201ENST00000335071 RBM12B-AS1Q9P1G2 102 aa13.21□□□□□ -0.29
FOXE3-201ENST00000335071 SEC61GP60059 68 aa13.2□□□□□ -0.3
FOXE3-201ENST00000335071 CDC42SE1Q9NRR8 79 aa13.2□□□□□ -0.3
FOXE3-201ENST00000335071 H1FX-AS1Q4G0G2 97 aa13.19□□□□□ -0.3
FOXE3-201ENST00000335071 S4R3F8 94 aa13.17□□□□□ -0.3
FOXE3-201ENST00000335071 KRTAP3-3Q9BYR6 98 aa13.13□□□□□ -0.31
FOXE3-201ENST00000335071 PCLOQ9Y6V0 5065 aa13.08□□□□□ -0.32
FOXE3-201ENST00000335071 UQCR11O14957 56 aa13.07□□□□□ -0.32
FOXE3-201ENST00000335071 MUC17Q685J3 4493 aa13.04□□□□□ -0.32
FOXE3-201ENST00000335071 KRTAP4-1Q9BYQ7 146 aa13.01□□□□□ -0.33
FOXE3-201ENST00000335071 SPATA8Q6RVD6 105 aa13□□□□□ -0.33
FOXE3-201ENST00000335071 MIR22HGQ0VDD5 57 aa12.98□□□□□ -0.33
FOXE3-201ENST00000335071 HERC1Q15751 4861 aa12.91□□□□□ -0.34
FOXE3-201ENST00000335071 A0A1B0GU33 70 aa12.88□□□□□ -0.35
FOXE3-201ENST00000335071 HMCN2Q8NDA2 5059 aa12.86□□□□□ -0.35
FOXE3-201ENST00000335071 CSAG1Q6PB30 78 aa12.84□□□□□ -0.35
FOXE3-201ENST00000335071 PMAIP1Q13794 54 aa12.83□□□□□ -0.36
FOXE3-201ENST00000335071 KRTAP10-6P60371 365 aaPredicted RBP12.78□□□□□ -0.36
FOXE3-201ENST00000335071 H0YAA0 97 aa12.78□□□□□ -0.36
FOXE3-201ENST00000335071 KRTAP3-2Q9BYR7 98 aa12.77□□□□□ -0.37
FOXE3-201ENST00000335071 KRTAP19-2Q3LHN2 52 aa12.72□□□□□ -0.37
FOXE3-201ENST00000335071 A6NN06 94 aa12.7□□□□□ -0.38
FOXE3-201ENST00000335071 ADM2Q7Z4H4 148 aa12.64□□□□□ -0.39
FOXE3-201ENST00000335071 P0C880 135 aa12.62□□□□□ -0.39
FOXE3-201ENST00000335071 MUC2Q02817 5179 aa12.55□□□□□ -0.4
FOXE3-201ENST00000335071 KRTAP13-4Q3LI77 160 aa12.52□□□□□ -0.41
FOXE3-201ENST00000335071 FLGP20930 4061 aaPredicted RBP12.42□□□□□ -0.42
FOXE3-201ENST00000335071 KTN1-AS1Q86SY8 53 aa12.41□□□□□ -0.42
FOXE3-201ENST00000335071 M0QZ58 72 aa12.33□□□□□ -0.44
FOXE3-201ENST00000335071 A0A0D9SG42 100 aa12.31□□□□□ -0.44
FOXE3-201ENST00000335071 LCE2CQ5TA81 110 aa12.28□□□□□ -0.44
FOXE3-201ENST00000335071 K7ERS5 55 aa12.27□□□□□ -0.44
FOXE3-201ENST00000335071 RNF213Q63HN8 5207 aa12.21□□□□□ -0.46
FOXE3-201ENST00000335071 UBR4Q5T4S7 5183 aa12.2□□□□□ -0.46
FOXE3-201ENST00000335071 R4GN34 69 aa12.16□□□□□ -0.46
FOXE3-201ENST00000335071 LORP23490 312 aaPredicted RBP12.1□□□□□ -0.47
FOXE3-201ENST00000335071 KRTAP12-2P59991 146 aa12.05□□□□□ -0.48
FOXE3-201ENST00000335071 KRTAP12-1P59990 96 aa12.04□□□□□ -0.48
FOXE3-201ENST00000335071 MT1HP80294 61 aa12.01□□□□□ -0.49
FOXE3-201ENST00000335071 PRAC1Q96KF2 57 aa12.01□□□□□ -0.49
FOXE3-201ENST00000335071 FAT4Q6V0I7 4981 aa12□□□□□ -0.49
FOXE3-201ENST00000335071 SPINT4Q6UDR6 99 aa11.98□□□□□ -0.49
FOXE3-201ENST00000335071 LINC01554Q52M75 96 aa11.96□□□□□ -0.49
FOXE3-201ENST00000335071 M0R2T5 61 aa11.96□□□□□ -0.5
FOXE3-201ENST00000335071 CRIPTQ9P021 101 aa11.92□□□□□ -0.5
FOXE3-201ENST00000335071 ROMO1P60602 79 aa11.87□□□□□ -0.51
FOXE3-201ENST00000335071 MT2AP02795 61 aa11.63□□□□□ -0.55
FOXE3-201ENST00000335071 KRTAP9-8Q9BYQ0 159 aa11.63□□□□□ -0.55
FOXE3-201ENST00000335071 KRTAP25-1Q3LHN0 102 aa11.59□□□□□ -0.55
FOXE3-201ENST00000335071 SPRR2GQ9BYE4 73 aa11.58□□□□□ -0.56
FOXE3-201ENST00000335071 MT1FP04733 61 aa11.57□□□□□ -0.56
FOXE3-201ENST00000335071 KRTAP10-10P60014 251 aa11.56□□□□□ -0.56
FOXE3-201ENST00000335071 KRTAP19-1Q8IUB9 90 aa11.5□□□□□ -0.57
FOXE3-201ENST00000335071 CAMK2N1Q7Z7J9 78 aa11.44□□□□□ -0.58
FOXE3-201ENST00000335071 C10orf95Q9H7T3 257 aa11.38□□□□□ -0.59
FOXE3-201ENST00000335071 PLAC4Q8WY50 150 aa11.3□□□□□ -0.6
FOXE3-201ENST00000335071 LCE2AQ5TA79 106 aaPredicted RBP11.27□□□□□ -0.61
FOXE3-201ENST00000335071 KRTAP19-8Q3LI54 63 aa11.21□□□□□ -0.61
FOXE3-201ENST00000335071 KRTAP9-3Q9BYQ3 159 aa11.19□□□□□ -0.62
FOXE3-201ENST00000335071 MT1BP07438 61 aa11.03□□□□□ -0.64
FOXE3-201ENST00000335071 TNP1P09430 55 aa10.95□□□□□ -0.66
FOXE3-201ENST00000335071 PP632Q6XCG6 107 aa10.83□□□□□ -0.68
FOXE3-201ENST00000335071 LCE2BO14633 110 aa10.81□□□□□ -0.68
FOXE3-201ENST00000335071 MT1XP80297 61 aa10.76□□□□□ -0.69
FOXE3-201ENST00000335071 KRTAP10-5P60370 271 aa10.76□□□□□ -0.69
FOXE3-201ENST00000335071 KRTAP23-1A1A580 65 aa10.72□□□□□ -0.69
FOXE3-201ENST00000335071 PRO2289Q9P1D8 64 aa10.61□□□□□ -0.71
FOXE3-201ENST00000335071 USH2AO75445 5202 aa10.41□□□□□ -0.74
FOXE3-201ENST00000335071 LCE3AQ5TA76 89 aa10.41□□□□□ -0.74
FOXE3-201ENST00000335071 KRTAP15-1Q3LI76 137 aa10.39□□□□□ -0.75
FOXE3-201ENST00000335071 KRTAP10-7P60409 375 aaPredicted RBP10.35□□□□□ -0.75
FOXE3-201ENST00000335071 KRTAP10-12P60413 245 aa10.33□□□□□ -0.76
FOXE3-201ENST00000335071 KRTAP8-1Q8IUC2 63 aa10.22□□□□□ -0.77
FOXE3-201ENST00000335071 LCE2DQ5TA82 110 aaPredicted RBP10.11□□□□□ -0.79
FOXE3-201ENST00000335071 KRTAP19-6Q3LI70 58 aa10.07□□□□□ -0.8
FOXE3-201ENST00000335071 SSPOA2VEC9 5147 aa10.06□□□□□ -0.8
FOXE3-201ENST00000335071 KRTAP12-3P60328 96 aa9.99□□□□□ -0.81
FOXE3-201ENST00000335071 FSIP2Q5CZC0 6907 aa9.88□□□□□ -0.83
FOXE3-201ENST00000335071 KRTAP4-8A0A0G2JLE6 195 aa9.85□□□□□ -0.83
FOXE3-201ENST00000335071 KRTAP4-8Q9BYQ9 185 aa9.85□□□□□ -0.83
FOXE3-201ENST00000335071 KRTAP19-5Q3LI72 72 aa9.81□□□□□ -0.84
FOXE3-201ENST00000335071 KMT2DO14686 5537 aa9.79□□□□□ -0.84
FOXE3-201ENST00000335071 SPRR5A0A1B0GTR4 108 aa9.78□□□□□ -0.84
FOXE3-201ENST00000335071 NDUFAF8A1L188 74 aa9.77□□□□□ -0.84
FOXE3-201ENST00000335071 LUZP6Q538Z0 58 aa9.64□□□□□ -0.87
FOXE3-201ENST00000335071 KRTAP9-2Q9BYQ4 174 aa9.64□□□□□ -0.87
FOXE3-201ENST00000335071 KRTAP19-7Q3SYF9 63 aa9.59□□□□□ -0.87
FOXE3-201ENST00000335071 FCGBPQ9Y6R7 5405 aaPredicted RBP9.53□□□□□ -0.88
FOXE3-201ENST00000335071 MT1EP04732 61 aa9.41□□□□□ -0.9
FOXE3-201ENST00000335071 LCE3CQ5T5A8 94 aa9.36□□□□□ -0.91
FOXE3-201ENST00000335071 CRCT1Q9UGL9 99 aa9.32□□□□□ -0.92
FOXE3-201ENST00000335071 KRTAP19-4Q3LI73 84 aa9.3□□□□□ -0.92
FOXE3-201ENST00000335071 MT1LQ93083 61 aa9.27□□□□□ -0.93
FOXE3-201ENST00000335071 H3BS24 57 aa9.26□□□□□ -0.93
FOXE3-201ENST00000335071 KRTAP4-7Q9BYR0 210 aa9.05□□□□□ -0.96
FOXE3-201ENST00000335071 MACF1Q9UPN3 7388 aaKnown RBP9.02□□□□□ -0.97
FOXE3-201ENST00000335071 SPRR2FQ96RM1 72 aa8.98□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms