RNA–Protein interactions for RNA: ENST00000334654.4

CHGA-202, Transcript of chromogranin A, humanhuman

TSL 1 (best) BASIC

Gene CHGA, Length 1,474 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHGA-202ENST00000334654 ACYP2P14621 99 aa8.57□□□□□ -1.04
CHGA-202ENST00000334654 DMAC1Q96GE9 116 aa8.57□□□□□ -1.04
CHGA-202ENST00000334654 M0R2T5 61 aa8.52□□□□□ -1.05
CHGA-202ENST00000334654 KRTAP10-6P60371 365 aaPredicted RBP8.49□□□□□ -1.05
CHGA-202ENST00000334654 LORP23490 312 aaPredicted RBP8.47□□□□□ -1.05
CHGA-202ENST00000334654 COA5Q86WW8 74 aa8.45□□□□□ -1.06
CHGA-202ENST00000334654 S4R3F8 94 aa8.43□□□□□ -1.06
CHGA-202ENST00000334654 LCA10Q71F78 164 aa8.42□□□□□ -1.06
CHGA-202ENST00000334654 SMIM26A0A096LP01 95 aa8.41□□□□□ -1.06
CHGA-202ENST00000334654 KRTAP3-3Q9BYR6 98 aa8.4□□□□□ -1.06
CHGA-202ENST00000334654 KRTAP9-8Q9BYQ0 159 aa8.38□□□□□ -1.07
CHGA-202ENST00000334654 CHKB-CPT1BH3BT56 60 aa8.37□□□□□ -1.07
CHGA-202ENST00000334654 SPTSSBQ8NFR3 76 aa8.33□□□□□ -1.08
CHGA-202ENST00000334654 V9GYY9 64 aa8.32□□□□□ -1.08
CHGA-202ENST00000334654 MT2AP02795 61 aa8.29□□□□□ -1.08
CHGA-202ENST00000334654 CSAG1Q6PB30 78 aa8.29□□□□□ -1.08
CHGA-202ENST00000334654 Q1T7F1 81 aa8.26□□□□□ -1.09
CHGA-202ENST00000334654 MT1FP04733 61 aa8.23□□□□□ -1.09
CHGA-202ENST00000334654 LINC01558Q9Y6Z2 57 aa8.18□□□□□ -1.1
CHGA-202ENST00000334654 KRTAP10-10P60014 251 aa8.15□□□□□ -1.1
CHGA-202ENST00000334654 LCE2DQ5TA82 110 aaPredicted RBP8.11□□□□□ -1.11
CHGA-202ENST00000334654 H0YAA0 97 aa8.09□□□□□ -1.11
CHGA-202ENST00000334654 PRR15LQ9BU68 103 aa8.09□□□□□ -1.11
CHGA-202ENST00000334654 KRTAP9-3Q9BYQ3 159 aa8.09□□□□□ -1.11
CHGA-202ENST00000334654 SEC61GP60059 68 aa8.06□□□□□ -1.12
CHGA-202ENST00000334654 A0A1B0GU69 56 aa8.03□□□□□ -1.12
CHGA-202ENST00000334654 KRTAP9-2Q9BYQ4 174 aa8.03□□□□□ -1.12
CHGA-202ENST00000334654 ADM2Q7Z4H4 148 aa8□□□□□ -1.13
CHGA-202ENST00000334654 KRTAP3-2Q9BYR7 98 aa7.99□□□□□ -1.13
CHGA-202ENST00000334654 SVIPQ8NHG7 77 aa7.98□□□□□ -1.13
CHGA-202ENST00000334654 PSPHP1O15172 72 aa7.96□□□□□ -1.13
CHGA-202ENST00000334654 LCE2BO14633 110 aa7.95□□□□□ -1.14
CHGA-202ENST00000334654 P0C880 135 aa7.94□□□□□ -1.14
CHGA-202ENST00000334654 Q5VV11 94 aa7.94□□□□□ -1.14
CHGA-202ENST00000334654 KRTAP19-1Q8IUB9 90 aa7.94□□□□□ -1.14
CHGA-202ENST00000334654 SPRR2GQ9BYE4 73 aa7.88□□□□□ -1.15
CHGA-202ENST00000334654 USH2AO75445 5202 aa7.88□□□□□ -1.15
CHGA-202ENST00000334654 CRIPTQ9P021 101 aa7.87□□□□□ -1.15
CHGA-202ENST00000334654 UQCR11O14957 56 aa7.83□□□□□ -1.16
CHGA-202ENST00000334654 A0A1B0GU33 70 aa7.81□□□□□ -1.16
CHGA-202ENST00000334654 A6NED7 52 aa7.79□□□□□ -1.16
CHGA-202ENST00000334654 KRTAP19-8Q3LI54 63 aa7.76□□□□□ -1.17
CHGA-202ENST00000334654 FSIP2Q5CZC0 6907 aa7.75□□□□□ -1.17
CHGA-202ENST00000334654 R4GN34 69 aa7.73□□□□□ -1.17
CHGA-202ENST00000334654 SPATA8Q6RVD6 105 aa7.72□□□□□ -1.17
CHGA-202ENST00000334654 M0QZ58 72 aa7.7□□□□□ -1.18
CHGA-202ENST00000334654 MT1BP07438 61 aa7.7□□□□□ -1.18
CHGA-202ENST00000334654 CDC42SE1Q9NRR8 79 aa7.7□□□□□ -1.18
CHGA-202ENST00000334654 SSPOA2VEC9 5147 aa7.7□□□□□ -1.18
CHGA-202ENST00000334654 MIR22HGQ0VDD5 57 aa7.68□□□□□ -1.18
CHGA-202ENST00000334654 CRCT1Q9UGL9 99 aa7.66□□□□□ -1.18
CHGA-202ENST00000334654 KRTAP13-4Q3LI77 160 aa7.65□□□□□ -1.18
CHGA-202ENST00000334654 BRK1Q8WUW1 75 aa7.65□□□□□ -1.18
CHGA-202ENST00000334654 KRTAP9-6A0A140TA67 174 aa7.61□□□□□ -1.19
CHGA-202ENST00000334654 PRO0628Q9UI54 55 aa7.57□□□□□ -1.2
CHGA-202ENST00000334654 KRTAP19-6Q3LI70 58 aa7.55□□□□□ -1.2
CHGA-202ENST00000334654 LINC01554Q52M75 96 aa7.55□□□□□ -1.2
CHGA-202ENST00000334654 FCGBPQ9Y6R7 5405 aaPredicted RBP7.46□□□□□ -1.22
CHGA-202ENST00000334654 A6NN06 94 aa7.45□□□□□ -1.22
CHGA-202ENST00000334654 K7ERS5 55 aa7.45□□□□□ -1.22
CHGA-202ENST00000334654 PLAC4Q8WY50 150 aa7.43□□□□□ -1.22
CHGA-202ENST00000334654 A8MU10 97 aa7.43□□□□□ -1.22
CHGA-202ENST00000334654 A0A0D9SG42 100 aa7.39□□□□□ -1.23
CHGA-202ENST00000334654 KRTAP10-5P60370 271 aa7.39□□□□□ -1.23
CHGA-202ENST00000334654 MT1XP80297 61 aa7.34□□□□□ -1.23
CHGA-202ENST00000334654 KRTAP12-1P59990 96 aa7.3□□□□□ -1.24
CHGA-202ENST00000334654 PMAIP1Q13794 54 aa7.3□□□□□ -1.24
CHGA-202ENST00000334654 KRTAP12-2P59991 146 aa7.26□□□□□ -1.25
CHGA-202ENST00000334654 SPINT4Q6UDR6 99 aa7.24□□□□□ -1.25
CHGA-202ENST00000334654 PRO2289Q9P1D8 64 aa7.23□□□□□ -1.25
CHGA-202ENST00000334654 CAMK2N1Q7Z7J9 78 aa7.16□□□□□ -1.26
CHGA-202ENST00000334654 KRTAP9-1A8MXZ3 250 aaPredicted RBP7.12□□□□□ -1.27
CHGA-202ENST00000334654 ROMO1P60602 79 aa7.05□□□□□ -1.28
CHGA-202ENST00000334654 MACF1Q9UPN3 7388 aaKnown RBP7.04□□□□□ -1.28
CHGA-202ENST00000334654 KRTAP10-7P60409 375 aaPredicted RBP7.02□□□□□ -1.29
CHGA-202ENST00000334654 KTN1-AS1Q86SY8 53 aa6.99□□□□□ -1.29
CHGA-202ENST00000334654 KRTAP10-12P60413 245 aa6.97□□□□□ -1.29
CHGA-202ENST00000334654 C10orf95Q9H7T3 257 aa6.96□□□□□ -1.3
CHGA-202ENST00000334654 KMT2DO14686 5537 aa6.92□□□□□ -1.3
CHGA-202ENST00000334654 KRTAP4-8A0A0G2JLE6 195 aa6.88□□□□□ -1.31
CHGA-202ENST00000334654 KRTAP9-7A8MTY7 169 aa6.88□□□□□ -1.31
CHGA-202ENST00000334654 KRTAP4-8Q9BYQ9 185 aa6.88□□□□□ -1.31
CHGA-202ENST00000334654 SYNE2Q8WXH0 6885 aaKnown RBP6.88□□□□□ -1.31
CHGA-202ENST00000334654 KRTAP25-1Q3LHN0 102 aa6.85□□□□□ -1.31
CHGA-202ENST00000334654 KRTAP6-3Q3LI67 103 aa6.82□□□□□ -1.32
CHGA-202ENST00000334654 TNP1P09430 55 aa6.79□□□□□ -1.32
CHGA-202ENST00000334654 KRTAP5-9P26371 169 aa6.75□□□□□ -1.33
CHGA-202ENST00000334654 KRTAP8-1Q8IUC2 63 aa6.75□□□□□ -1.33
CHGA-202ENST00000334654 KRTAP23-1A1A580 65 aa6.72□□□□□ -1.33
CHGA-202ENST00000334654 PP632Q6XCG6 107 aa6.67□□□□□ -1.34
CHGA-202ENST00000334654 PRAC1Q96KF2 57 aa6.67□□□□□ -1.34
CHGA-202ENST00000334654 SPRR2FQ96RM1 72 aa6.62□□□□□ -1.35
CHGA-202ENST00000334654 LCE3AQ5TA76 89 aa6.61□□□□□ -1.35
CHGA-202ENST00000334654 MUC12Q9UKN1 5478 aa6.6□□□□□ -1.35
CHGA-202ENST00000334654 KRTAP19-7Q3SYF9 63 aa6.57□□□□□ -1.36
CHGA-202ENST00000334654 MDN1Q9NU22 5596 aa6.51□□□□□ -1.37
CHGA-202ENST00000334654 KRTAP19-5Q3LI72 72 aa6.51□□□□□ -1.37
CHGA-202ENST00000334654 MT1EP04732 61 aa6.47□□□□□ -1.37
CHGA-202ENST00000334654 LCE1AQ5T7P2 110 aa6.44□□□□□ -1.38
CHGA-202ENST00000334654 NEBP20929 6669 aa6.41□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 75.1 ms