RNA–Protein interactions for RNA: ENST00000334352.8

USP16-201, Transcript of ubiquitin specific peptidase 16, humanhuman

APPRIS P3 TSL 5 BASIC

Gene USP16, Length 3,004 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP16-201ENST00000334352 KRTAP9-9Q9BYP9 154 aa2.82□□□□□ -1.96
USP16-201ENST00000334352 KRTAP9-4Q9BYQ2 154 aa2.82□□□□□ -1.96
USP16-201ENST00000334352 SPCS1Q9Y6A9 102 aa2.82□□□□□ -1.96
USP16-201ENST00000334352 COL5A1-AS1Q5SY13 56 aa2.81□□□□□ -1.96
USP16-201ENST00000334352 A6NN06 94 aa2.81□□□□□ -1.96
USP16-201ENST00000334352 ATOX1O00244 68 aa2.8□□□□□ -1.96
USP16-201ENST00000334352 UQCRQO14949 82 aa2.8□□□□□ -1.96
USP16-201ENST00000334352 C4orf26Q17RF5 130 aa2.79□□□□□ -1.96
USP16-201ENST00000334352 TMA7Q9Y2S6 64 aaKnown RBP2.78□□□□□ -1.96
USP16-201ENST00000334352 NEBP20929 6669 aa2.78□□□□□ -1.96
USP16-201ENST00000334352 TRAV22A0A0B4J277 110 aa2.78□□□□□ -1.96
USP16-201ENST00000334352 KRTAP20-1Q3LI63 56 aa2.78□□□□□ -1.96
USP16-201ENST00000334352 GTF2H5Q6ZYL4 71 aa2.77□□□□□ -1.97
USP16-201ENST00000334352 KRTAP4-12Q9BQ66 201 aa2.76□□□□□ -1.97
USP16-201ENST00000334352 FSIP2Q5CZC0 6907 aa2.76□□□□□ -1.97
USP16-201ENST00000334352 H3BPC8 53 aa2.76□□□□□ -1.97
USP16-201ENST00000334352 Q8N9L7 120 aa2.75□□□□□ -1.97
USP16-201ENST00000334352 KRTAP2-3P0C7H8 128 aa2.75□□□□□ -1.97
USP16-201ENST00000334352 C5orf47Q569G3 176 aa2.75□□□□□ -1.97
USP16-201ENST00000334352 KRTAP2-4Q9BYR9 128 aa2.75□□□□□ -1.97
USP16-201ENST00000334352 MACF1Q9UPN3 7388 aaKnown RBP2.74□□□□□ -1.97
USP16-201ENST00000334352 FAM236AA0A1B0GUQ0 79 aa2.74□□□□□ -1.97
USP16-201ENST00000334352 FAM236BA0A1B0GV22 79 aa2.74□□□□□ -1.97
USP16-201ENST00000334352 PRO2289Q9P1D8 64 aa2.74□□□□□ -1.97
USP16-201ENST00000334352 BATFQ16520 125 aa2.73□□□□□ -1.97
USP16-201ENST00000334352 C20orf197Q8N268 126 aa2.71□□□□□ -1.97
USP16-201ENST00000334352 NDUFC1O43677 76 aa2.71□□□□□ -1.98
USP16-201ENST00000334352 LCE1AQ5T7P2 110 aa2.71□□□□□ -1.98
USP16-201ENST00000334352 MT1XP80297 61 aa2.7□□□□□ -1.98
USP16-201ENST00000334352 LINC00643Q86TS7 51 aa2.68□□□□□ -1.98
USP16-201ENST00000334352 H0Y9P7 68 aa2.67□□□□□ -1.98
USP16-201ENST00000334352 OCR1Q9BZK8 76 aa2.67□□□□□ -1.98
USP16-201ENST00000334352 DMAC1Q96GE9 116 aa2.66□□□□□ -1.98
USP16-201ENST00000334352 KRTAP10-12P60413 245 aa2.66□□□□□ -1.98
USP16-201ENST00000334352 A0A087WVE0 104 aa2.65□□□□□ -1.99
USP16-201ENST00000334352 KRTAP2-2Q9BYT5 123 aa2.65□□□□□ -1.99
USP16-201ENST00000334352 KRTAP2-1Q9BYU5 128 aa2.65□□□□□ -1.99
USP16-201ENST00000334352 TRAV7A0A075B6U4 112 aa2.64□□□□□ -1.99
USP16-201ENST00000334352 ETDBQ3ZM63 59 aa2.64□□□□□ -1.99
USP16-201ENST00000334352 PLAC4Q8WY50 150 aa2.63□□□□□ -1.99
USP16-201ENST00000334352 ADM2Q7Z4H4 148 aa2.63□□□□□ -1.99
USP16-201ENST00000334352 SYNE2Q8WXH0 6885 aaKnown RBP2.62□□□□□ -1.99
USP16-201ENST00000334352 MP68P56378 58 aa2.62□□□□□ -1.99
USP16-201ENST00000334352 SPRR2EP22531 72 aa2.6□□□□□ -1.99
USP16-201ENST00000334352 SPRR2BP35325 72 aa2.6□□□□□ -1.99
USP16-201ENST00000334352 SPRR2AP35326 72 aa2.6□□□□□ -1.99
USP16-201ENST00000334352 KRTAP8-1Q8IUC2 63 aa2.59□□□□□ -1.99
USP16-201ENST00000334352 SMIM20Q8N5G0 67 aa2.59□□□□□ -2
USP16-201ENST00000334352 SPTSSBQ8NFR3 76 aa2.58□□□□□ -2
USP16-201ENST00000334352 M0QZ58 72 aa2.58□□□□□ -2
USP16-201ENST00000334352 KRTAP4-11Q9BYQ6 195 aa2.58□□□□□ -2
USP16-201ENST00000334352 SPRR2FQ96RM1 72 aa2.57□□□□□ -2
USP16-201ENST00000334352 PCP4L1A6NKN8 68 aa2.57□□□□□ -2
USP16-201ENST00000334352 LINC00208Q96KT6 92 aa2.57□□□□□ -2
USP16-201ENST00000334352 HIST1H4AP62805 103 aaKnown RBP2.56□□□□□ -2
USP16-201ENST00000334352 R4GN34 69 aa2.55□□□□□ -2
USP16-201ENST00000334352 P0C880 135 aa2.54□□□□□ -2
USP16-201ENST00000334352 ACYP2P14621 99 aa2.54□□□□□ -2
USP16-201ENST00000334352 SPRR2DP22532 72 aa2.53□□□□□ -2
USP16-201ENST00000334352 SPANXA2-OT1Q8N9U9 137 aa2.53□□□□□ -2
USP16-201ENST00000334352 J3QR89 54 aa2.52□□□□□ -2.01
USP16-201ENST00000334352 MUC12Q9UKN1 5478 aa2.52□□□□□ -2.01
USP16-201ENST00000334352 A0A1B0GV90 55 aa2.5□□□□□ -2.01
USP16-201ENST00000334352 KRTAP10-7P60409 375 aaPredicted RBP2.49□□□□□ -2.01
USP16-201ENST00000334352 MDN1Q9NU22 5596 aa2.49□□□□□ -2.01
USP16-201ENST00000334352 KMT2DO14686 5537 aa2.47□□□□□ -2.01
USP16-201ENST00000334352 HMCN1Q96RW7 5635 aa2.47□□□□□ -2.01
USP16-201ENST00000334352 LCE5AQ5TCM9 118 aa2.47□□□□□ -2.01
USP16-201ENST00000334352 KRTAP19-7Q3SYF9 63 aa2.42□□□□□ -2.02
USP16-201ENST00000334352 MT1EP04732 61 aa2.42□□□□□ -2.02
USP16-201ENST00000334352 KRTAP19-3Q7Z4W3 81 aa2.41□□□□□ -2.02
USP16-201ENST00000334352 LCE4AQ5TA78 99 aa2.41□□□□□ -2.02
USP16-201ENST00000334352 SCGB1A1P11684 91 aa2.4□□□□□ -2.02
USP16-201ENST00000334352 MT1GP13640 62 aa2.39□□□□□ -2.03
USP16-201ENST00000334352 MT-ATP8P03928 68 aa2.38□□□□□ -2.03
USP16-201ENST00000334352 KRTAP19-4Q3LI73 84 aa2.38□□□□□ -2.03
USP16-201ENST00000334352 CYSTM1Q9H1C7 97 aa2.37□□□□□ -2.03
USP16-201ENST00000334352 KRTAP5-4Q6L8H1 288 aa2.37□□□□□ -2.03
USP16-201ENST00000334352 CHKB-CPT1BH3BT56 60 aa2.36□□□□□ -2.03
USP16-201ENST00000334352 K7ERU9 68 aa2.36□□□□□ -2.03
USP16-201ENST00000334352 PCP4P48539 62 aa2.36□□□□□ -2.03
USP16-201ENST00000334352 KRTAP13-4Q3LI77 160 aa2.36□□□□□ -2.03
USP16-201ENST00000334352 SERP2Q8N6R1 65 aa2.36□□□□□ -2.03
USP16-201ENST00000334352 C10orf95Q9H7T3 257 aa2.34□□□□□ -2.03
USP16-201ENST00000334352 PP632Q6XCG6 107 aa2.33□□□□□ -2.04
USP16-201ENST00000334352 LINC01554Q52M75 96 aa2.32□□□□□ -2.04
USP16-201ENST00000334352 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.32□□□□□ -2.04
USP16-201ENST00000334352 COA5Q86WW8 74 aa2.3□□□□□ -2.04
USP16-201ENST00000334352 KRTAP12-1P59990 96 aa2.29□□□□□ -2.04
USP16-201ENST00000334352 MT1MQ8N339 61 aa2.29□□□□□ -2.04
USP16-201ENST00000334352 MT1LQ93083 61 aa2.29□□□□□ -2.04
USP16-201ENST00000334352 SEC61GP60059 68 aa2.29□□□□□ -2.04
USP16-201ENST00000334352 CAMK2N1Q7Z7J9 78 aa2.29□□□□□ -2.04
USP16-201ENST00000334352 SMIM26A0A096LP01 95 aa2.28□□□□□ -2.04
USP16-201ENST00000334352 SERP1Q9Y6X1 66 aa2.28□□□□□ -2.04
USP16-201ENST00000334352 KRTAP19-5Q3LI72 72 aa2.27□□□□□ -2.05
USP16-201ENST00000334352 A0A1B0GU33 70 aa2.27□□□□□ -2.05
USP16-201ENST00000334352 COX7CP15954 63 aa2.26□□□□□ -2.05
USP16-201ENST00000334352 SVIPQ8NHG7 77 aa2.25□□□□□ -2.05
USP16-201ENST00000334352 SNURFQ9Y675 71 aa2.25□□□□□ -2.05
Retrieved 100 of 20,778 RNA–protein pairs in 130.3 ms