RNA–Protein interactions for RNA: ENST00000331479.3

SMDT1-201, Transcript of single-pass membrane protein with aspartate rich tail 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMDT1, Length 1,567 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMDT1-201ENST00000331479 CSAG1Q6PB30 78 aa12.25□□□□□ -0.45
SMDT1-201ENST00000331479 DMAC1Q96GE9 116 aa12.22□□□□□ -0.45
SMDT1-201ENST00000331479 COX7CP15954 63 aa12.18□□□□□ -0.46
SMDT1-201ENST00000331479 NDUFC1O43677 76 aa12.12□□□□□ -0.47
SMDT1-201ENST00000331479 KRTAP9-3Q9BYQ3 159 aa12.11□□□□□ -0.47
SMDT1-201ENST00000331479 ANAPC13Q9BS18 74 aa12.06□□□□□ -0.48
SMDT1-201ENST00000331479 FSIP2Q5CZC0 6907 aa12.04□□□□□ -0.48
SMDT1-201ENST00000331479 SPANXA2-OT1Q8N9U9 137 aa12.02□□□□□ -0.49
SMDT1-201ENST00000331479 ACYP2P14621 99 aa12.01□□□□□ -0.49
SMDT1-201ENST00000331479 CYSTM1Q9H1C7 97 aa11.98□□□□□ -0.49
SMDT1-201ENST00000331479 LCE2BO14633 110 aa11.94□□□□□ -0.5
SMDT1-201ENST00000331479 USH2AO75445 5202 aa11.91□□□□□ -0.5
SMDT1-201ENST00000331479 H7BZZ5 65 aa11.89□□□□□ -0.51
SMDT1-201ENST00000331479 H0YAA0 97 aa11.86□□□□□ -0.51
SMDT1-201ENST00000331479 CCDC179H3BU77 68 aa11.84□□□□□ -0.51
SMDT1-201ENST00000331479 CHKB-CPT1BH3BT56 60 aa11.79□□□□□ -0.52
SMDT1-201ENST00000331479 ADM2Q7Z4H4 148 aa11.79□□□□□ -0.52
SMDT1-201ENST00000331479 CRCT1Q9UGL9 99 aa11.79□□□□□ -0.52
SMDT1-201ENST00000331479 KRTAP19-1Q8IUB9 90 aa11.77□□□□□ -0.53
SMDT1-201ENST00000331479 KRTAP9-6A0A140TA67 174 aa11.74□□□□□ -0.53
SMDT1-201ENST00000331479 SPTSSBQ8NFR3 76 aa11.71□□□□□ -0.54
SMDT1-201ENST00000331479 SSPOA2VEC9 5147 aa11.69□□□□□ -0.54
SMDT1-201ENST00000331479 COA5Q86WW8 74 aa11.68□□□□□ -0.54
SMDT1-201ENST00000331479 SPRR2GQ9BYE4 73 aa11.68□□□□□ -0.54
SMDT1-201ENST00000331479 CRIPTQ9P021 101 aa11.65□□□□□ -0.54
SMDT1-201ENST00000331479 P0C880 135 aa11.63□□□□□ -0.55
SMDT1-201ENST00000331479 KRTAP3-2Q9BYR7 98 aa11.63□□□□□ -0.55
SMDT1-201ENST00000331479 KRTAP19-8Q3LI54 63 aa11.51□□□□□ -0.57
SMDT1-201ENST00000331479 MT1BP07438 61 aa11.46□□□□□ -0.57
SMDT1-201ENST00000331479 Q5VV11 94 aa11.44□□□□□ -0.58
SMDT1-201ENST00000331479 ATP5EP56381 51 aaPredicted RBP11.41□□□□□ -0.58
SMDT1-201ENST00000331479 R4GN34 69 aa11.41□□□□□ -0.58
SMDT1-201ENST00000331479 KRTAP19-6Q3LI70 58 aa11.37□□□□□ -0.59
SMDT1-201ENST00000331479 M0QZ58 72 aa11.37□□□□□ -0.59
SMDT1-201ENST00000331479 TMEM258P61165 79 aa11.37□□□□□ -0.59
SMDT1-201ENST00000331479 FCGBPQ9Y6R7 5405 aaPredicted RBP11.32□□□□□ -0.6
SMDT1-201ENST00000331479 SEC61GP60059 68 aa11.19□□□□□ -0.62
SMDT1-201ENST00000331479 LINC01554Q52M75 96 aa11.19□□□□□ -0.62
SMDT1-201ENST00000331479 SERP1Q9Y6X1 66 aa11.17□□□□□ -0.62
SMDT1-201ENST00000331479 KRTAP13-4Q3LI77 160 aa11.12□□□□□ -0.63
SMDT1-201ENST00000331479 PCP4P48539 62 aa11.1□□□□□ -0.63
SMDT1-201ENST00000331479 A6NN06 94 aa11.07□□□□□ -0.64
SMDT1-201ENST00000331479 PLAC4Q8WY50 150 aa11.07□□□□□ -0.64
SMDT1-201ENST00000331479 A0A1B0GU69 56 aa11.05□□□□□ -0.64
SMDT1-201ENST00000331479 KRTAP10-5P60370 271 aa11.05□□□□□ -0.64
SMDT1-201ENST00000331479 A0A1B0GU33 70 aa10.99□□□□□ -0.65
SMDT1-201ENST00000331479 MACF1Q9UPN3 7388 aaKnown RBP10.96□□□□□ -0.66
SMDT1-201ENST00000331479 KRTAP9-1A8MXZ3 250 aaPredicted RBP10.95□□□□□ -0.66
SMDT1-201ENST00000331479 LINC01558Q9Y6Z2 57 aa10.94□□□□□ -0.66
SMDT1-201ENST00000331479 SPATA8Q6RVD6 105 aa10.93□□□□□ -0.66
SMDT1-201ENST00000331479 MT1XP80297 61 aa10.9□□□□□ -0.67
SMDT1-201ENST00000331479 PRR15LQ9BU68 103 aa10.85□□□□□ -0.67
SMDT1-201ENST00000331479 A0A0D9SG42 100 aa10.82□□□□□ -0.68
SMDT1-201ENST00000331479 PRO2289Q9P1D8 64 aa10.81□□□□□ -0.68
SMDT1-201ENST00000331479 SYNE2Q8WXH0 6885 aaKnown RBP10.73□□□□□ -0.69
SMDT1-201ENST00000331479 A8MU10 97 aa10.65□□□□□ -0.71
SMDT1-201ENST00000331479 SMIM26A0A096LP01 95 aa10.64□□□□□ -0.71
SMDT1-201ENST00000331479 KRTAP9-7A8MTY7 169 aa10.63□□□□□ -0.71
SMDT1-201ENST00000331479 KRTAP12-1P59990 96 aa10.61□□□□□ -0.71
SMDT1-201ENST00000331479 Q1T7F1 81 aa10.61□□□□□ -0.71
SMDT1-201ENST00000331479 SPINT4Q6UDR6 99 aa10.6□□□□□ -0.71
SMDT1-201ENST00000331479 V9GYY9 64 aa10.6□□□□□ -0.71
SMDT1-201ENST00000331479 RPS28P62857 69 aaKnown RBP10.58□□□□□ -0.72
SMDT1-201ENST00000331479 CAMK2N1Q7Z7J9 78 aa10.58□□□□□ -0.72
SMDT1-201ENST00000331479 KRTAP12-2P59991 146 aa10.56□□□□□ -0.72
SMDT1-201ENST00000331479 UQCR11O14957 56 aa10.53□□□□□ -0.72
SMDT1-201ENST00000331479 PSPHP1O15172 72 aa10.53□□□□□ -0.72
SMDT1-201ENST00000331479 KMT2DO14686 5537 aa10.47□□□□□ -0.73
SMDT1-201ENST00000331479 KRTAP10-7P60409 375 aaPredicted RBP10.43□□□□□ -0.74
SMDT1-201ENST00000331479 KRTAP6-3Q3LI67 103 aa10.41□□□□□ -0.74
SMDT1-201ENST00000331479 MIR22HGQ0VDD5 57 aa10.36□□□□□ -0.75
SMDT1-201ENST00000331479 KRTAP10-12P60413 245 aa10.33□□□□□ -0.76
SMDT1-201ENST00000331479 KRTAP4-8A0A0G2JLE6 195 aa10.26□□□□□ -0.77
SMDT1-201ENST00000331479 KRTAP4-8Q9BYQ9 185 aa10.26□□□□□ -0.77
SMDT1-201ENST00000331479 KRTAP5-9P26371 169 aa10.19□□□□□ -0.78
SMDT1-201ENST00000331479 A6NED7 52 aa10.18□□□□□ -0.78
SMDT1-201ENST00000331479 KRTAP8-1Q8IUC2 63 aa10.18□□□□□ -0.78
SMDT1-201ENST00000331479 MUC12Q9UKN1 5478 aa10.15□□□□□ -0.78
SMDT1-201ENST00000331479 C10orf95Q9H7T3 257 aa10.11□□□□□ -0.79
SMDT1-201ENST00000331479 SPRR2FQ96RM1 72 aa10.04□□□□□ -0.8
SMDT1-201ENST00000331479 K7ERS5 55 aa9.99□□□□□ -0.81
SMDT1-201ENST00000331479 NEBP20929 6669 aa9.96□□□□□ -0.82
SMDT1-201ENST00000331479 MDN1Q9NU22 5596 aa9.95□□□□□ -0.82
SMDT1-201ENST00000331479 TNP1P09430 55 aa9.9□□□□□ -0.82
SMDT1-201ENST00000331479 CDC42SE1Q9NRR8 79 aa9.84□□□□□ -0.83
SMDT1-201ENST00000331479 SPRR2EP22531 72 aa9.75□□□□□ -0.85
SMDT1-201ENST00000331479 SPRR2BP35325 72 aa9.75□□□□□ -0.85
SMDT1-201ENST00000331479 SPRR2AP35326 72 aa9.75□□□□□ -0.85
SMDT1-201ENST00000331479 KRTAP19-7Q3SYF9 63 aa9.73□□□□□ -0.85
SMDT1-201ENST00000331479 LCE1AQ5T7P2 110 aa9.71□□□□□ -0.85
SMDT1-201ENST00000331479 LCE3AQ5TA76 89 aa9.71□□□□□ -0.86
SMDT1-201ENST00000331479 KRTAP19-5Q3LI72 72 aa9.64□□□□□ -0.87
SMDT1-201ENST00000331479 KRTAP25-1Q3LHN0 102 aa9.63□□□□□ -0.87
SMDT1-201ENST00000331479 MT1EP04732 61 aa9.6□□□□□ -0.87
SMDT1-201ENST00000331479 ROMO1P60602 79 aa9.48□□□□□ -0.89
SMDT1-201ENST00000331479 BRK1Q8WUW1 75 aa9.41□□□□□ -0.9
SMDT1-201ENST00000331479 SPRR2DP22532 72 aa9.4□□□□□ -0.9
SMDT1-201ENST00000331479 KRTAP19-3Q7Z4W3 81 aa9.39□□□□□ -0.91
SMDT1-201ENST00000331479 KRTAP20-1Q3LI63 56 aa9.36□□□□□ -0.91
SMDT1-201ENST00000331479 LCE5AQ5TCM9 118 aa9.34□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms