RNA–Protein interactions for RNA: ENST00000329758.5

TRIM49-201, Transcript of tripartite motif containing 49, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene TRIM49, Length 2,163 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM49-201ENST00000329758 DYNC1H1Q14204 4646 aaKnown RBP4.16□□□□□ -1.74
TRIM49-201ENST00000329758 KRTAP4-8A0A0G2JLE6 195 aa4.14□□□□□ -1.75
TRIM49-201ENST00000329758 APOBP04114 4563 aaKnown RBP4.13□□□□□ -1.75
TRIM49-201ENST00000329758 LCE2AQ5TA79 106 aaPredicted RBP4.13□□□□□ -1.75
TRIM49-201ENST00000329758 TYMSOSQ8TAI1 123 aa4.13□□□□□ -1.75
TRIM49-201ENST00000329758 FAT1Q14517 4588 aa4.13□□□□□ -1.75
TRIM49-201ENST00000329758 RYR3Q15413 4870 aa4.12□□□□□ -1.75
TRIM49-201ENST00000329758 TPRXLQ17RH7 258 aa4.12□□□□□ -1.75
TRIM49-201ENST00000329758 LUZP6Q538Z0 58 aa4.12□□□□□ -1.75
TRIM49-201ENST00000329758 LCE3BQ5TA77 95 aa4.1□□□□□ -1.75
TRIM49-201ENST00000329758 SMR3BP02814 79 aaPredicted RBP4.09□□□□□ -1.76
TRIM49-201ENST00000329758 KRTAP13-2Q52LG2 175 aa4.09□□□□□ -1.76
TRIM49-201ENST00000329758 Q8N1X5 172 aa4.09□□□□□ -1.76
TRIM49-201ENST00000329758 KRTAP17-1Q9BYP8 105 aa4.07□□□□□ -1.76
TRIM49-201ENST00000329758 RPL37P61927 97 aaKnown RBP4.06□□□□□ -1.76
TRIM49-201ENST00000329758 KRTAP4-7Q9BYR0 210 aa4.06□□□□□ -1.76
TRIM49-201ENST00000329758 COX6B2Q6YFQ2 88 aa4.06□□□□□ -1.76
TRIM49-201ENST00000329758 KRTAP1-4P0C5Y4 121 aa4.04□□□□□ -1.76
TRIM49-201ENST00000329758 FLG2Q5D862 2391 aaPredicted RBP4.04□□□□□ -1.76
TRIM49-201ENST00000329758 A0A1B0GVY2 172 aa4.02□□□□□ -1.77
TRIM49-201ENST00000329758 HSPG2P98160 4391 aa4.01□□□□□ -1.77
TRIM49-201ENST00000329758 KRTAP9-9Q9BYP9 154 aa4□□□□□ -1.77
TRIM49-201ENST00000329758 KRTAP9-4Q9BYQ2 154 aa4□□□□□ -1.77
TRIM49-201ENST00000329758 PKHD1L1Q86WI1 4243 aa4□□□□□ -1.77
TRIM49-201ENST00000329758 C10orf95Q9H7T3 257 aa4□□□□□ -1.77
TRIM49-201ENST00000329758 SEC61BP60468 96 aaKnown RBP3.99□□□□□ -1.77
TRIM49-201ENST00000329758 LRP1Q07954 4544 aaKnown RBP3.98□□□□□ -1.77
TRIM49-201ENST00000329758 EPPK1P58107 5090 aaKnown RBP3.96□□□□□ -1.78
TRIM49-201ENST00000329758 KRTAP3-1Q9BYR8 98 aa3.94□□□□□ -1.78
TRIM49-201ENST00000329758 KIAA1109Q2LD37 5005 aa3.94□□□□□ -1.78
TRIM49-201ENST00000329758 MYCBP2O75592 4640 aa3.94□□□□□ -1.78
TRIM49-201ENST00000329758 KRTAP10-4P60372 401 aaPredicted RBP3.93□□□□□ -1.78
TRIM49-201ENST00000329758 RYR1P21817 5038 aa3.92□□□□□ -1.78
TRIM49-201ENST00000329758 KRTAP5-3Q6L8H2 238 aa3.92□□□□□ -1.78
TRIM49-201ENST00000329758 TNXBP22105 4242 aa3.91□□□□□ -1.78
TRIM49-201ENST00000329758 KRTAP9-8Q9BYQ0 159 aa3.91□□□□□ -1.78
TRIM49-201ENST00000329758 C9orf92A6NGG3 77 aa3.9□□□□□ -1.78
TRIM49-201ENST00000329758 KRTAP4-12Q9BQ66 201 aa3.9□□□□□ -1.79
TRIM49-201ENST00000329758 S4R3F8 94 aa3.89□□□□□ -1.79
TRIM49-201ENST00000329758 FAT3Q8TDW7 4589 aa3.89□□□□□ -1.79
TRIM49-201ENST00000329758 KRTAP10-6P60371 365 aaPredicted RBP3.89□□□□□ -1.79
TRIM49-201ENST00000329758 KRTAP13-4Q3LI77 160 aa3.89□□□□□ -1.79
TRIM49-201ENST00000329758 A0A0D9SG42 100 aa3.87□□□□□ -1.79
TRIM49-201ENST00000329758 LCE1DQ5T752 114 aa3.86□□□□□ -1.79
TRIM49-201ENST00000329758 KRTAP4-2Q9BYR5 136 aa3.85□□□□□ -1.79
TRIM49-201ENST00000329758 DMBT1Q9UGM3 2413 aaPredicted RBP3.84□□□□□ -1.8
TRIM49-201ENST00000329758 KRTAP4-9Q9BYQ8 210 aa3.83□□□□□ -1.8
TRIM49-201ENST00000329758 RPS29P62273 56 aaKnown RBP3.82□□□□□ -1.8
TRIM49-201ENST00000329758 Q5VSD8 79 aa3.82□□□□□ -1.8
TRIM49-201ENST00000329758 KRTAP12-2P59991 146 aa3.81□□□□□ -1.8
TRIM49-201ENST00000329758 PLAC4Q8WY50 150 aa3.8□□□□□ -1.8
TRIM49-201ENST00000329758 LORP23490 312 aaPredicted RBP3.79□□□□□ -1.8
TRIM49-201ENST00000329758 KRTAP12-1P59990 96 aa3.78□□□□□ -1.8
TRIM49-201ENST00000329758 CAMK2N1Q7Z7J9 78 aa3.76□□□□□ -1.81
TRIM49-201ENST00000329758 ABCA13Q86UQ4 5058 aa3.74□□□□□ -1.81
TRIM49-201ENST00000329758 KRTAP10-8P60410 259 aa3.73□□□□□ -1.81
TRIM49-201ENST00000329758 LPAP08519 4548 aa3.73□□□□□ -1.81
TRIM49-201ENST00000329758 KRTAP4-5Q9BYR2 181 aa3.71□□□□□ -1.82
TRIM49-201ENST00000329758 MT1HL1P0DM35 61 aa3.7□□□□□ -1.82
TRIM49-201ENST00000329758 HERC2O95714 4834 aa3.69□□□□□ -1.82
TRIM49-201ENST00000329758 LRP2P98164 4655 aa3.69□□□□□ -1.82
TRIM49-201ENST00000329758 M0QZ58 72 aa3.68□□□□□ -1.82
TRIM49-201ENST00000329758 BIRC6Q9NR09 4857 aa3.66□□□□□ -1.82
TRIM49-201ENST00000329758 PRO2289Q9P1D8 64 aa3.63□□□□□ -1.83
TRIM49-201ENST00000329758 LCE2CQ5TA81 110 aa3.63□□□□□ -1.83
TRIM49-201ENST00000329758 PP632Q6XCG6 107 aa3.62□□□□□ -1.83
TRIM49-201ENST00000329758 KRTAP19-1Q8IUB9 90 aa3.62□□□□□ -1.83
TRIM49-201ENST00000329758 HERC1Q15751 4861 aa3.59□□□□□ -1.84
TRIM49-201ENST00000329758 PCLOQ9Y6V0 5065 aa3.58□□□□□ -1.84
TRIM49-201ENST00000329758 KRTAP4-11Q9BYQ6 195 aa3.56□□□□□ -1.84
TRIM49-201ENST00000329758 MUC17Q685J3 4493 aa3.53□□□□□ -1.84
TRIM49-201ENST00000329758 SPRR5A0A1B0GTR4 108 aa3.53□□□□□ -1.84
TRIM49-201ENST00000329758 MUC2Q02817 5179 aa3.52□□□□□ -1.85
TRIM49-201ENST00000329758 INE1O15225 51 aa3.51□□□□□ -1.85
TRIM49-201ENST00000329758 HMCN2Q8NDA2 5059 aa3.48□□□□□ -1.85
TRIM49-201ENST00000329758 KRTAP4-1Q9BYQ7 146 aa3.47□□□□□ -1.85
TRIM49-201ENST00000329758 R4GN34 69 aa3.44□□□□□ -1.86
TRIM49-201ENST00000329758 KRTAP23-1A1A580 65 aa3.42□□□□□ -1.86
TRIM49-201ENST00000329758 UBR4Q5T4S7 5183 aa3.36□□□□□ -1.87
TRIM49-201ENST00000329758 FAT4Q6V0I7 4981 aa3.36□□□□□ -1.87
TRIM49-201ENST00000329758 RNF213Q63HN8 5207 aa3.35□□□□□ -1.87
TRIM49-201ENST00000329758 KRTAP19-2Q3LHN2 52 aa3.32□□□□□ -1.88
TRIM49-201ENST00000329758 FLGP20930 4061 aaPredicted RBP3.32□□□□□ -1.88
TRIM49-201ENST00000329758 TNP1P09430 55 aa3.28□□□□□ -1.88
TRIM49-201ENST00000329758 M0R2T5 61 aa3.12□□□□□ -1.91
TRIM49-201ENST00000329758 MT1HP80294 61 aa3.11□□□□□ -1.91
TRIM49-201ENST00000329758 LCE5AQ5TCM9 118 aa3.11□□□□□ -1.91
TRIM49-201ENST00000329758 MT1FP04733 61 aa3.04□□□□□ -1.92
TRIM49-201ENST00000329758 MT2AP02795 61 aa3.02□□□□□ -1.93
TRIM49-201ENST00000329758 KRTAP10-10P60014 251 aa3.02□□□□□ -1.93
TRIM49-201ENST00000329758 LCE3AQ5TA76 89 aa3.01□□□□□ -1.93
TRIM49-201ENST00000329758 KRTAP8-1Q8IUC2 63 aa2.98□□□□□ -1.93
TRIM49-201ENST00000329758 SPRR2GQ9BYE4 73 aa2.97□□□□□ -1.93
TRIM49-201ENST00000329758 USH2AO75445 5202 aa2.96□□□□□ -1.94
TRIM49-201ENST00000329758 LCE4AQ5TA78 99 aa2.95□□□□□ -1.94
TRIM49-201ENST00000329758 HMCN1Q96RW7 5635 aa2.94□□□□□ -1.94
TRIM49-201ENST00000329758 KRTAP10-12P60413 245 aa2.93□□□□□ -1.94
TRIM49-201ENST00000329758 MT1BP07438 61 aa2.9□□□□□ -1.95
TRIM49-201ENST00000329758 KRTAP9-3Q9BYQ3 159 aa2.88□□□□□ -1.95
TRIM49-201ENST00000329758 KRTAP12-3P60328 96 aa2.86□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms