RNA–Protein interactions for RNA: ENST00000328085.10

NPIPA1-201, Transcript of nuclear pore complex interacting protein family member A1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NPIPA1, Length 1,084 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA1-201ENST00000328085 DEFB4AO15263 64 aa5.2□□□□□ -1.58
NPIPA1-201ENST00000328085 LCE1DQ5T752 114 aa5.2□□□□□ -1.58
NPIPA1-201ENST00000328085 PKHD1P08F94 4074 aa5.2□□□□□ -1.58
NPIPA1-201ENST00000328085 DYNC1H1Q14204 4646 aaKnown RBP5.2□□□□□ -1.58
NPIPA1-201ENST00000328085 CAMK2N1Q7Z7J9 78 aa5.19□□□□□ -1.58
NPIPA1-201ENST00000328085 DMBT1Q9UGM3 2413 aaPredicted RBP5.19□□□□□ -1.58
NPIPA1-201ENST00000328085 DNAH11Q96DT5 4516 aa5.18□□□□□ -1.58
NPIPA1-201ENST00000328085 CRIPTQ9P021 101 aa5.18□□□□□ -1.58
NPIPA1-201ENST00000328085 VPS13DQ5THJ4 4388 aa5.18□□□□□ -1.58
NPIPA1-201ENST00000328085 LCE4AQ5TA78 99 aa5.17□□□□□ -1.58
NPIPA1-201ENST00000328085 HSPG2P98160 4391 aa5.16□□□□□ -1.58
NPIPA1-201ENST00000328085 RPL37P61927 97 aaKnown RBP5.16□□□□□ -1.58
NPIPA1-201ENST00000328085 FAT2Q9NYQ8 4349 aa5.16□□□□□ -1.58
NPIPA1-201ENST00000328085 DNAH17Q9UFH2 4485 aa5.15□□□□□ -1.59
NPIPA1-201ENST00000328085 DNAH2Q9P225 4427 aa5.14□□□□□ -1.59
NPIPA1-201ENST00000328085 KRTAP23-1A1A580 65 aa5.14□□□□□ -1.59
NPIPA1-201ENST00000328085 TPRXLQ17RH7 258 aa5.14□□□□□ -1.59
NPIPA1-201ENST00000328085 KRTAP19-4Q3LI73 84 aa5.14□□□□□ -1.59
NPIPA1-201ENST00000328085 PKD1P98161 4303 aa5.13□□□□□ -1.59
NPIPA1-201ENST00000328085 Q8N1X5 172 aa5.12□□□□□ -1.59
NPIPA1-201ENST00000328085 KRTAP4-7Q9BYR0 210 aa5.12□□□□□ -1.59
NPIPA1-201ENST00000328085 DNAH6Q9C0G6 4158 aa5.11□□□□□ -1.59
NPIPA1-201ENST00000328085 CIRBP-AS1Q8TBR5 109 aa5.08□□□□□ -1.6
NPIPA1-201ENST00000328085 SRRM2Q9UQ35 2752 aaKnown RBP5.07□□□□□ -1.6
NPIPA1-201ENST00000328085 KRTAP9-7A8MTY7 169 aa5.06□□□□□ -1.6
NPIPA1-201ENST00000328085 SPINK1P00995 79 aa5.06□□□□□ -1.6
NPIPA1-201ENST00000328085 SPINK6Q6UWN8 80 aa5.06□□□□□ -1.6
NPIPA1-201ENST00000328085 APOBP04114 4563 aaKnown RBP5.05□□□□□ -1.6
NPIPA1-201ENST00000328085 TYMSOSQ8TAI1 123 aa5.04□□□□□ -1.6
NPIPA1-201ENST00000328085 APLNQ9ULZ1 77 aa5.04□□□□□ -1.6
NPIPA1-201ENST00000328085 KRTAP4-9Q9BYQ8 210 aa5.03□□□□□ -1.6
NPIPA1-201ENST00000328085 LRP1BQ9NZR2 4599 aa4.99□□□□□ -1.61
NPIPA1-201ENST00000328085 FLG2Q5D862 2391 aaPredicted RBP4.98□□□□□ -1.61
NPIPA1-201ENST00000328085 MYCBP2O75592 4640 aa4.96□□□□□ -1.61
NPIPA1-201ENST00000328085 SPACA4Q8TDM5 124 aa4.95□□□□□ -1.62
NPIPA1-201ENST00000328085 DNAH5Q8TE73 4624 aa4.95□□□□□ -1.62
NPIPA1-201ENST00000328085 PLAC4Q8WY50 150 aa4.94□□□□□ -1.62
NPIPA1-201ENST00000328085 HMCN2Q8NDA2 5059 aa4.94□□□□□ -1.62
NPIPA1-201ENST00000328085 Q5VSD8 79 aa4.92□□□□□ -1.62
NPIPA1-201ENST00000328085 KRTAP4-2Q9BYR5 136 aa4.91□□□□□ -1.62
NPIPA1-201ENST00000328085 VPS13BQ7Z7G8 4022 aa4.89□□□□□ -1.63
NPIPA1-201ENST00000328085 UBE2DNLQ8IWF7 75 aa4.88□□□□□ -1.63
NPIPA1-201ENST00000328085 KRTAP10-2P60368 255 aa4.87□□□□□ -1.63
NPIPA1-201ENST00000328085 LCE5AQ5TCM9 118 aa4.87□□□□□ -1.63
NPIPA1-201ENST00000328085 C10orf95Q9H7T3 257 aa4.87□□□□□ -1.63
NPIPA1-201ENST00000328085 FAT1Q14517 4588 aa4.87□□□□□ -1.63
NPIPA1-201ENST00000328085 SMR3BP02814 79 aaPredicted RBP4.86□□□□□ -1.63
NPIPA1-201ENST00000328085 KRTAP9-3Q9BYQ3 159 aa4.86□□□□□ -1.63
NPIPA1-201ENST00000328085 KRTAP4-11Q9BYQ6 195 aa4.86□□□□□ -1.63
NPIPA1-201ENST00000328085 S4R3F8 94 aa4.86□□□□□ -1.63
NPIPA1-201ENST00000328085 RNF213Q63HN8 5207 aa4.86□□□□□ -1.63
NPIPA1-201ENST00000328085 RPS29P62273 56 aaKnown RBP4.83□□□□□ -1.64
NPIPA1-201ENST00000328085 PRO2289Q9P1D8 64 aa4.83□□□□□ -1.64
NPIPA1-201ENST00000328085 KRTAP3-1Q9BYR8 98 aa4.81□□□□□ -1.64
NPIPA1-201ENST00000328085 KRTAP10-6P60371 365 aaPredicted RBP4.8□□□□□ -1.64
NPIPA1-201ENST00000328085 KRTAP10-1P60331 282 aa4.76□□□□□ -1.65
NPIPA1-201ENST00000328085 Q6ZRN7 208 aaPredicted RBP4.76□□□□□ -1.65
NPIPA1-201ENST00000328085 KRTAP1-5Q9BYS1 174 aa4.76□□□□□ -1.65
NPIPA1-201ENST00000328085 PP632Q6XCG6 107 aa4.75□□□□□ -1.65
NPIPA1-201ENST00000328085 LRP1Q07954 4544 aaKnown RBP4.71□□□□□ -1.66
NPIPA1-201ENST00000328085 A0A0D9SG42 100 aa4.71□□□□□ -1.66
NPIPA1-201ENST00000328085 M0QZ58 72 aa4.71□□□□□ -1.66
NPIPA1-201ENST00000328085 KRTAP13-4Q3LI77 160 aa4.71□□□□□ -1.66
NPIPA1-201ENST00000328085 INE1O15225 51 aa4.7□□□□□ -1.66
NPIPA1-201ENST00000328085 KRTAP12-1P59990 96 aa4.69□□□□□ -1.66
NPIPA1-201ENST00000328085 KRTAP13-2Q52LG2 175 aa4.68□□□□□ -1.66
NPIPA1-201ENST00000328085 LRP2P98164 4655 aa4.68□□□□□ -1.66
NPIPA1-201ENST00000328085 KRTAP12-2P59991 146 aa4.67□□□□□ -1.66
NPIPA1-201ENST00000328085 PKHD1L1Q86WI1 4243 aa4.65□□□□□ -1.67
NPIPA1-201ENST00000328085 FAT3Q8TDW7 4589 aa4.65□□□□□ -1.67
NPIPA1-201ENST00000328085 FAT4Q6V0I7 4981 aa4.61□□□□□ -1.67
NPIPA1-201ENST00000328085 MT1HL1P0DM35 61 aa4.59□□□□□ -1.67
NPIPA1-201ENST00000328085 KRTAP10-4P60372 401 aaPredicted RBP4.59□□□□□ -1.67
NPIPA1-201ENST00000328085 DNAH8Q96JB1 4490 aa4.55□□□□□ -1.68
NPIPA1-201ENST00000328085 MUC2Q02817 5179 aa4.55□□□□□ -1.68
NPIPA1-201ENST00000328085 TNXBP22105 4242 aa4.54□□□□□ -1.68
NPIPA1-201ENST00000328085 SPRR5A0A1B0GTR4 108 aa4.54□□□□□ -1.68
NPIPA1-201ENST00000328085 KRTAP1-4P0C5Y4 121 aa4.53□□□□□ -1.68
NPIPA1-201ENST00000328085 CRCT1Q9UGL9 99 aa4.5□□□□□ -1.69
NPIPA1-201ENST00000328085 R4GN34 69 aa4.49□□□□□ -1.69
NPIPA1-201ENST00000328085 FSIP2Q5CZC0 6907 aa4.44□□□□□ -1.7
NPIPA1-201ENST00000328085 LPAP08519 4548 aa4.42□□□□□ -1.7
NPIPA1-201ENST00000328085 KRTAP10-8P60410 259 aa4.38□□□□□ -1.71
NPIPA1-201ENST00000328085 C9orf92A6NGG3 77 aa4.34□□□□□ -1.71
NPIPA1-201ENST00000328085 KRTAP5-3Q6L8H2 238 aa4.28□□□□□ -1.72
NPIPA1-201ENST00000328085 TNP1P09430 55 aa4.18□□□□□ -1.74
NPIPA1-201ENST00000328085 MUC17Q685J3 4493 aa4.09□□□□□ -1.76
NPIPA1-201ENST00000328085 KRTAP9-8Q9BYQ0 159 aa4.06□□□□□ -1.76
NPIPA1-201ENST00000328085 KRTAP4-1Q9BYQ7 146 aa4□□□□□ -1.77
NPIPA1-201ENST00000328085 SYNE2Q8WXH0 6885 aaKnown RBP3.94□□□□□ -1.78
NPIPA1-201ENST00000328085 MT1HP80294 61 aa3.94□□□□□ -1.78
NPIPA1-201ENST00000328085 SSPOA2VEC9 5147 aa3.93□□□□□ -1.78
NPIPA1-201ENST00000328085 FCGBPQ9Y6R7 5405 aaPredicted RBP3.9□□□□□ -1.78
NPIPA1-201ENST00000328085 KRTAP19-2Q3LHN2 52 aa3.89□□□□□ -1.79
NPIPA1-201ENST00000328085 MACF1Q9UPN3 7388 aaKnown RBP3.89□□□□□ -1.79
NPIPA1-201ENST00000328085 USH2AO75445 5202 aa3.89□□□□□ -1.79
NPIPA1-201ENST00000328085 M0R2T5 61 aa3.85□□□□□ -1.79
NPIPA1-201ENST00000328085 KRTAP10-10P60014 251 aa3.81□□□□□ -1.8
NPIPA1-201ENST00000328085 KRTAP8-1Q8IUC2 63 aa3.77□□□□□ -1.81
NPIPA1-201ENST00000328085 FLGP20930 4061 aaPredicted RBP3.76□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 413.5 ms