RNA–Protein interactions for RNA: ENST00000327304.9

EXOSC3-201, Transcript of exosome component 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene EXOSC3, Length 1,806 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC3-201ENST00000327304 PSPHP1O15172 72 aa9.51□□□□□ -0.89
EXOSC3-201ENST00000327304 SPTSSBQ8NFR3 76 aa9.49□□□□□ -0.89
EXOSC3-201ENST00000327304 PRR15LQ9BU68 103 aa9.49□□□□□ -0.89
EXOSC3-201ENST00000327304 Q5VV11 94 aa9.45□□□□□ -0.9
EXOSC3-201ENST00000327304 RBM12B-AS1Q9P1G2 102 aa9.43□□□□□ -0.9
EXOSC3-201ENST00000327304 KRTAP19-2Q3LHN2 52 aa9.42□□□□□ -0.9
EXOSC3-201ENST00000327304 A0A1B0GU69 56 aa9.35□□□□□ -0.91
EXOSC3-201ENST00000327304 H1FX-AS1Q4G0G2 97 aa9.34□□□□□ -0.91
EXOSC3-201ENST00000327304 FAT4Q6V0I7 4981 aa9.34□□□□□ -0.91
EXOSC3-201ENST00000327304 LCE2CQ5TA81 110 aa9.33□□□□□ -0.92
EXOSC3-201ENST00000327304 S4R3F8 94 aa9.31□□□□□ -0.92
EXOSC3-201ENST00000327304 LCA10Q71F78 164 aa9.28□□□□□ -0.92
EXOSC3-201ENST00000327304 SEC61GP60059 68 aa9.27□□□□□ -0.93
EXOSC3-201ENST00000327304 KRTAP3-3Q9BYR6 98 aa9.27□□□□□ -0.93
EXOSC3-201ENST00000327304 FLGP20930 4061 aaPredicted RBP9.27□□□□□ -0.93
EXOSC3-201ENST00000327304 BRK1Q8WUW1 75 aa9.26□□□□□ -0.93
EXOSC3-201ENST00000327304 A6NED7 52 aa9.24□□□□□ -0.93
EXOSC3-201ENST00000327304 PRO0628Q9UI54 55 aa9.17□□□□□ -0.94
EXOSC3-201ENST00000327304 MT1HP80294 61 aa9.16□□□□□ -0.94
EXOSC3-201ENST00000327304 CDC42SE1Q9NRR8 79 aa9.12□□□□□ -0.95
EXOSC3-201ENST00000327304 UQCR11O14957 56 aa9.12□□□□□ -0.95
EXOSC3-201ENST00000327304 CSAG1Q6PB30 78 aa9.08□□□□□ -0.96
EXOSC3-201ENST00000327304 SPATA8Q6RVD6 105 aa9.04□□□□□ -0.96
EXOSC3-201ENST00000327304 A8MU10 97 aa9.03□□□□□ -0.96
EXOSC3-201ENST00000327304 M0R2T5 61 aa9.03□□□□□ -0.96
EXOSC3-201ENST00000327304 A0A1B0GU33 70 aa9.02□□□□□ -0.97
EXOSC3-201ENST00000327304 MIR22HGQ0VDD5 57 aa9.02□□□□□ -0.97
EXOSC3-201ENST00000327304 LCE2AQ5TA79 106 aaPredicted RBP9.02□□□□□ -0.97
EXOSC3-201ENST00000327304 KRTAP10-6P60371 365 aaPredicted RBP8.99□□□□□ -0.97
EXOSC3-201ENST00000327304 KRTAP3-2Q9BYR7 98 aa8.98□□□□□ -0.97
EXOSC3-201ENST00000327304 H0YAA0 97 aa8.95□□□□□ -0.98
EXOSC3-201ENST00000327304 ADM2Q7Z4H4 148 aa8.91□□□□□ -0.98
EXOSC3-201ENST00000327304 P0C880 135 aa8.87□□□□□ -0.99
EXOSC3-201ENST00000327304 LORP23490 312 aaPredicted RBP8.82□□□□□ -1
EXOSC3-201ENST00000327304 SVIPQ8NHG7 77 aa8.8□□□□□ -1
EXOSC3-201ENST00000327304 KRTAP9-8Q9BYQ0 159 aa8.77□□□□□ -1
EXOSC3-201ENST00000327304 PMAIP1Q13794 54 aa8.77□□□□□ -1.01
EXOSC3-201ENST00000327304 KRTAP13-4Q3LI77 160 aa8.75□□□□□ -1.01
EXOSC3-201ENST00000327304 MT2AP02795 61 aa8.73□□□□□ -1.01
EXOSC3-201ENST00000327304 M0QZ58 72 aa8.71□□□□□ -1.01
EXOSC3-201ENST00000327304 A6NN06 94 aa8.7□□□□□ -1.02
EXOSC3-201ENST00000327304 MT1FP04733 61 aa8.68□□□□□ -1.02
EXOSC3-201ENST00000327304 KRTAP10-10P60014 251 aa8.63□□□□□ -1.03
EXOSC3-201ENST00000327304 K7ERS5 55 aa8.59□□□□□ -1.03
EXOSC3-201ENST00000327304 A0A0D9SG42 100 aa8.59□□□□□ -1.03
EXOSC3-201ENST00000327304 R4GN34 69 aa8.59□□□□□ -1.03
EXOSC3-201ENST00000327304 LCE2DQ5TA82 110 aaPredicted RBP8.51□□□□□ -1.05
EXOSC3-201ENST00000327304 CRIPTQ9P021 101 aa8.49□□□□□ -1.05
EXOSC3-201ENST00000327304 KRTAP9-3Q9BYQ3 159 aa8.47□□□□□ -1.05
EXOSC3-201ENST00000327304 KTN1-AS1Q86SY8 53 aa8.47□□□□□ -1.05
EXOSC3-201ENST00000327304 KRTAP12-1P59990 96 aa8.45□□□□□ -1.06
EXOSC3-201ENST00000327304 KRTAP12-2P59991 146 aa8.43□□□□□ -1.06
EXOSC3-201ENST00000327304 LINC01554Q52M75 96 aa8.4□□□□□ -1.07
EXOSC3-201ENST00000327304 KRTAP19-1Q8IUB9 90 aa8.4□□□□□ -1.07
EXOSC3-201ENST00000327304 SPINT4Q6UDR6 99 aa8.39□□□□□ -1.07
EXOSC3-201ENST00000327304 SPRR2GQ9BYE4 73 aa8.36□□□□□ -1.07
EXOSC3-201ENST00000327304 LCE2BO14633 110 aa8.3□□□□□ -1.08
EXOSC3-201ENST00000327304 ROMO1P60602 79 aa8.26□□□□□ -1.09
EXOSC3-201ENST00000327304 USH2AO75445 5202 aa8.21□□□□□ -1.1
EXOSC3-201ENST00000327304 KRTAP19-8Q3LI54 63 aa8.2□□□□□ -1.1
EXOSC3-201ENST00000327304 KRTAP9-2Q9BYQ4 174 aa8.17□□□□□ -1.1
EXOSC3-201ENST00000327304 PRAC1Q96KF2 57 aa8.16□□□□□ -1.1
EXOSC3-201ENST00000327304 MT1BP07438 61 aa8.14□□□□□ -1.11
EXOSC3-201ENST00000327304 CAMK2N1Q7Z7J9 78 aa8.06□□□□□ -1.12
EXOSC3-201ENST00000327304 PLAC4Q8WY50 150 aa8.01□□□□□ -1.13
EXOSC3-201ENST00000327304 SSPOA2VEC9 5147 aa7.99□□□□□ -1.13
EXOSC3-201ENST00000327304 KRTAP25-1Q3LHN0 102 aa7.99□□□□□ -1.13
EXOSC3-201ENST00000327304 FSIP2Q5CZC0 6907 aa7.98□□□□□ -1.13
EXOSC3-201ENST00000327304 C10orf95Q9H7T3 257 aa7.98□□□□□ -1.13
EXOSC3-201ENST00000327304 KRTAP19-6Q3LI70 58 aa7.85□□□□□ -1.15
EXOSC3-201ENST00000327304 CRCT1Q9UGL9 99 aa7.82□□□□□ -1.16
EXOSC3-201ENST00000327304 MT1XP80297 61 aa7.8□□□□□ -1.16
EXOSC3-201ENST00000327304 KRTAP10-5P60370 271 aa7.78□□□□□ -1.16
EXOSC3-201ENST00000327304 TNP1P09430 55 aa7.72□□□□□ -1.17
EXOSC3-201ENST00000327304 PRO2289Q9P1D8 64 aa7.71□□□□□ -1.18
EXOSC3-201ENST00000327304 FCGBPQ9Y6R7 5405 aaPredicted RBP7.7□□□□□ -1.18
EXOSC3-201ENST00000327304 KRTAP9-6A0A140TA67 174 aa7.64□□□□□ -1.19
EXOSC3-201ENST00000327304 PP632Q6XCG6 107 aa7.62□□□□□ -1.19
EXOSC3-201ENST00000327304 KRTAP23-1A1A580 65 aa7.59□□□□□ -1.19
EXOSC3-201ENST00000327304 KRTAP10-7P60409 375 aaPredicted RBP7.48□□□□□ -1.21
EXOSC3-201ENST00000327304 KRTAP10-12P60413 245 aa7.38□□□□□ -1.23
EXOSC3-201ENST00000327304 LCE3AQ5TA76 89 aa7.33□□□□□ -1.24
EXOSC3-201ENST00000327304 MACF1Q9UPN3 7388 aaKnown RBP7.32□□□□□ -1.24
EXOSC3-201ENST00000327304 KMT2DO14686 5537 aa7.31□□□□□ -1.24
EXOSC3-201ENST00000327304 KRTAP4-8A0A0G2JLE6 195 aa7.27□□□□□ -1.25
EXOSC3-201ENST00000327304 KRTAP4-8Q9BYQ9 185 aa7.27□□□□□ -1.25
EXOSC3-201ENST00000327304 KRTAP9-1A8MXZ3 250 aaPredicted RBP7.26□□□□□ -1.25
EXOSC3-201ENST00000327304 KRTAP8-1Q8IUC2 63 aa7.23□□□□□ -1.25
EXOSC3-201ENST00000327304 SYNE2Q8WXH0 6885 aaKnown RBP7.12□□□□□ -1.27
EXOSC3-201ENST00000327304 KRTAP15-1Q3LI76 137 aa7.1□□□□□ -1.27
EXOSC3-201ENST00000327304 KRTAP12-3P60328 96 aa7.05□□□□□ -1.28
EXOSC3-201ENST00000327304 KRTAP6-3Q3LI67 103 aa6.99□□□□□ -1.29
EXOSC3-201ENST00000327304 KRTAP19-5Q3LI72 72 aa6.98□□□□□ -1.29
EXOSC3-201ENST00000327304 KRTAP19-7Q3SYF9 63 aa6.97□□□□□ -1.29
EXOSC3-201ENST00000327304 KRTAP5-9P26371 169 aa6.96□□□□□ -1.3
EXOSC3-201ENST00000327304 KRTAP9-7A8MTY7 169 aa6.95□□□□□ -1.3
EXOSC3-201ENST00000327304 SPRR2FQ96RM1 72 aa6.95□□□□□ -1.3
EXOSC3-201ENST00000327304 MUC12Q9UKN1 5478 aa6.87□□□□□ -1.31
EXOSC3-201ENST00000327304 MT1EP04732 61 aa6.86□□□□□ -1.31
EXOSC3-201ENST00000327304 SPRR5A0A1B0GTR4 108 aa6.82□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 10.8 ms