RNA–Protein interactions for RNA: ENST00000326974.8

KLHDC3-202, Transcript of kelch domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene KLHDC3, Length 1,909 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KLHDC3-202ENST00000326974 A0A1B0GU69 56 aa8.73□□□□□ -1.01
KLHDC3-202ENST00000326974 TPRXLQ17RH7 258 aa8.72□□□□□ -1.01
KLHDC3-202ENST00000326974 CDC42SE1Q9NRR8 79 aa8.67□□□□□ -1.02
KLHDC3-202ENST00000326974 HERC1Q15751 4861 aa8.61□□□□□ -1.03
KLHDC3-202ENST00000326974 SPTSSBQ8NFR3 76 aa8.6□□□□□ -1.03
KLHDC3-202ENST00000326974 KRTAP3-3Q9BYR6 98 aa8.57□□□□□ -1.04
KLHDC3-202ENST00000326974 MUC17Q685J3 4493 aa8.51□□□□□ -1.05
KLHDC3-202ENST00000326974 SPATA8Q6RVD6 105 aa8.5□□□□□ -1.05
KLHDC3-202ENST00000326974 UQCR11O14957 56 aa8.5□□□□□ -1.05
KLHDC3-202ENST00000326974 SEC61GP60059 68 aa8.48□□□□□ -1.05
KLHDC3-202ENST00000326974 MIR22HGQ0VDD5 57 aa8.48□□□□□ -1.05
KLHDC3-202ENST00000326974 S4R3F8 94 aa8.46□□□□□ -1.05
KLHDC3-202ENST00000326974 PMAIP1Q13794 54 aa8.45□□□□□ -1.06
KLHDC3-202ENST00000326974 HMCN2Q8NDA2 5059 aa8.44□□□□□ -1.06
KLHDC3-202ENST00000326974 A6NN06 94 aa8.44□□□□□ -1.06
KLHDC3-202ENST00000326974 H1FX-AS1Q4G0G2 97 aa8.42□□□□□ -1.06
KLHDC3-202ENST00000326974 H0YAA0 97 aa8.41□□□□□ -1.06
KLHDC3-202ENST00000326974 KRTAP4-1Q9BYQ7 146 aa8.41□□□□□ -1.06
KLHDC3-202ENST00000326974 A0A1B0GU33 70 aa8.37□□□□□ -1.07
KLHDC3-202ENST00000326974 KRTAP10-6P60371 365 aaPredicted RBP8.37□□□□□ -1.07
KLHDC3-202ENST00000326974 KRTAP3-2Q9BYR7 98 aa8.36□□□□□ -1.07
KLHDC3-202ENST00000326974 SEC61BP60468 96 aaKnown RBP8.35□□□□□ -1.07
KLHDC3-202ENST00000326974 RBM12B-AS1Q9P1G2 102 aa8.35□□□□□ -1.07
KLHDC3-202ENST00000326974 P0C880 135 aa8.26□□□□□ -1.09
KLHDC3-202ENST00000326974 KRTAP13-4Q3LI77 160 aa8.25□□□□□ -1.09
KLHDC3-202ENST00000326974 KRTAP19-2Q3LHN2 52 aa8.22□□□□□ -1.09
KLHDC3-202ENST00000326974 KTN1-AS1Q86SY8 53 aa8.21□□□□□ -1.09
KLHDC3-202ENST00000326974 MUC2Q02817 5179 aa8.18□□□□□ -1.1
KLHDC3-202ENST00000326974 CSAG1Q6PB30 78 aa8.18□□□□□ -1.1
KLHDC3-202ENST00000326974 ADM2Q7Z4H4 148 aa8.18□□□□□ -1.1
KLHDC3-202ENST00000326974 UBR4Q5T4S7 5183 aa8.09□□□□□ -1.11
KLHDC3-202ENST00000326974 A0A0D9SG42 100 aa8.06□□□□□ -1.12
KLHDC3-202ENST00000326974 PRAC1Q96KF2 57 aa8.04□□□□□ -1.12
KLHDC3-202ENST00000326974 FLGP20930 4061 aaPredicted RBP8.03□□□□□ -1.12
KLHDC3-202ENST00000326974 RNF213Q63HN8 5207 aa7.99□□□□□ -1.13
KLHDC3-202ENST00000326974 LORP23490 312 aaPredicted RBP7.93□□□□□ -1.14
KLHDC3-202ENST00000326974 KRTAP12-2P59991 146 aa7.91□□□□□ -1.14
KLHDC3-202ENST00000326974 FAT4Q6V0I7 4981 aa7.89□□□□□ -1.15
KLHDC3-202ENST00000326974 K7ERS5 55 aa7.89□□□□□ -1.15
KLHDC3-202ENST00000326974 M0QZ58 72 aa7.89□□□□□ -1.15
KLHDC3-202ENST00000326974 KRTAP12-1P59990 96 aa7.88□□□□□ -1.15
KLHDC3-202ENST00000326974 LCE2CQ5TA81 110 aa7.87□□□□□ -1.15
KLHDC3-202ENST00000326974 R4GN34 69 aa7.8□□□□□ -1.16
KLHDC3-202ENST00000326974 SPINT4Q6UDR6 99 aa7.79□□□□□ -1.16
KLHDC3-202ENST00000326974 LINC01554Q52M75 96 aa7.76□□□□□ -1.17
KLHDC3-202ENST00000326974 ROMO1P60602 79 aa7.75□□□□□ -1.17
KLHDC3-202ENST00000326974 CRIPTQ9P021 101 aa7.71□□□□□ -1.18
KLHDC3-202ENST00000326974 MT1HP80294 61 aa7.64□□□□□ -1.19
KLHDC3-202ENST00000326974 KRTAP25-1Q3LHN0 102 aa7.64□□□□□ -1.19
KLHDC3-202ENST00000326974 C10orf95Q9H7T3 257 aa7.53□□□□□ -1.2
KLHDC3-202ENST00000326974 M0R2T5 61 aa7.51□□□□□ -1.21
KLHDC3-202ENST00000326974 MT2AP02795 61 aa7.44□□□□□ -1.22
KLHDC3-202ENST00000326974 MT1FP04733 61 aa7.43□□□□□ -1.22
KLHDC3-202ENST00000326974 LCE2AQ5TA79 106 aaPredicted RBP7.43□□□□□ -1.22
KLHDC3-202ENST00000326974 KRTAP19-1Q8IUB9 90 aa7.42□□□□□ -1.22
KLHDC3-202ENST00000326974 KRTAP9-8Q9BYQ0 159 aa7.42□□□□□ -1.22
KLHDC3-202ENST00000326974 SPRR2GQ9BYE4 73 aa7.39□□□□□ -1.23
KLHDC3-202ENST00000326974 CAMK2N1Q7Z7J9 78 aa7.34□□□□□ -1.23
KLHDC3-202ENST00000326974 KRTAP10-10P60014 251 aa7.32□□□□□ -1.24
KLHDC3-202ENST00000326974 KRTAP19-8Q3LI54 63 aa7.15□□□□□ -1.27
KLHDC3-202ENST00000326974 PLAC4Q8WY50 150 aa7.14□□□□□ -1.27
KLHDC3-202ENST00000326974 KRTAP9-3Q9BYQ3 159 aa7.13□□□□□ -1.27
KLHDC3-202ENST00000326974 MT1BP07438 61 aa7.11□□□□□ -1.27
KLHDC3-202ENST00000326974 TNP1P09430 55 aa7.02□□□□□ -1.29
KLHDC3-202ENST00000326974 MT1XP80297 61 aa6.95□□□□□ -1.3
KLHDC3-202ENST00000326974 KRTAP10-5P60370 271 aa6.94□□□□□ -1.3
KLHDC3-202ENST00000326974 PP632Q6XCG6 107 aa6.94□□□□□ -1.3
KLHDC3-202ENST00000326974 LCE2BO14633 110 aa6.92□□□□□ -1.3
KLHDC3-202ENST00000326974 KRTAP15-1Q3LI76 137 aa6.91□□□□□ -1.3
KLHDC3-202ENST00000326974 KRTAP23-1A1A580 65 aa6.84□□□□□ -1.31
KLHDC3-202ENST00000326974 USH2AO75445 5202 aa6.82□□□□□ -1.32
KLHDC3-202ENST00000326974 LCE2DQ5TA82 110 aaPredicted RBP6.81□□□□□ -1.32
KLHDC3-202ENST00000326974 LCE3AQ5TA76 89 aa6.8□□□□□ -1.32
KLHDC3-202ENST00000326974 KRTAP10-7P60409 375 aaPredicted RBP6.73□□□□□ -1.33
KLHDC3-202ENST00000326974 KRTAP9-2Q9BYQ4 174 aa6.69□□□□□ -1.34
KLHDC3-202ENST00000326974 KRTAP10-12P60413 245 aa6.64□□□□□ -1.35
KLHDC3-202ENST00000326974 PRO2289Q9P1D8 64 aa6.62□□□□□ -1.35
KLHDC3-202ENST00000326974 KRTAP8-1Q8IUC2 63 aa6.6□□□□□ -1.35
KLHDC3-202ENST00000326974 FSIP2Q5CZC0 6907 aa6.6□□□□□ -1.35
KLHDC3-202ENST00000326974 SSPOA2VEC9 5147 aa6.59□□□□□ -1.36
KLHDC3-202ENST00000326974 NDUFAF8A1L188 74 aa6.52□□□□□ -1.37
KLHDC3-202ENST00000326974 H3BS24 57 aa6.52□□□□□ -1.37
KLHDC3-202ENST00000326974 KMT2DO14686 5537 aa6.5□□□□□ -1.37
KLHDC3-202ENST00000326974 KRTAP19-6Q3LI70 58 aa6.46□□□□□ -1.37
KLHDC3-202ENST00000326974 KRTAP12-3P60328 96 aa6.45□□□□□ -1.38
KLHDC3-202ENST00000326974 SPRR5A0A1B0GTR4 108 aa6.44□□□□□ -1.38
KLHDC3-202ENST00000326974 KRTAP4-8A0A0G2JLE6 195 aa6.4□□□□□ -1.38
KLHDC3-202ENST00000326974 KRTAP4-8Q9BYQ9 185 aa6.4□□□□□ -1.38
KLHDC3-202ENST00000326974 CRCT1Q9UGL9 99 aa6.4□□□□□ -1.38
KLHDC3-202ENST00000326974 KRTAP19-5Q3LI72 72 aa6.36□□□□□ -1.39
KLHDC3-202ENST00000326974 FCGBPQ9Y6R7 5405 aaPredicted RBP6.34□□□□□ -1.39
KLHDC3-202ENST00000326974 KRTAP9-6A0A140TA67 174 aa6.24□□□□□ -1.41
KLHDC3-202ENST00000326974 LUZP6Q538Z0 58 aa6.24□□□□□ -1.41
KLHDC3-202ENST00000326974 KRTAP19-7Q3SYF9 63 aa6.21□□□□□ -1.42
KLHDC3-202ENST00000326974 LCE3CQ5T5A8 94 aa6.05□□□□□ -1.44
KLHDC3-202ENST00000326974 MT1EP04732 61 aa6.05□□□□□ -1.44
KLHDC3-202ENST00000326974 MACF1Q9UPN3 7388 aaKnown RBP6.03□□□□□ -1.44
KLHDC3-202ENST00000326974 MT1LQ93083 61 aa5.97□□□□□ -1.45
KLHDC3-202ENST00000326974 KRTAP4-7Q9BYR0 210 aa5.97□□□□□ -1.45
KLHDC3-202ENST00000326974 KRTAP9-1A8MXZ3 250 aaPredicted RBP5.94□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms