RNA–Protein interactions for RNA: ENST00000326335.8

CUL4A-201, Transcript of cullin 4A, humanhuman

TSL 1 (best) BASIC

Gene CUL4A, Length 3,705 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUL4A-201ENST00000326335 TNXBP22105 4242 aa5.6□□□□□ -1.51
CUL4A-201ENST00000326335 RPS29P62273 56 aaKnown RBP5.6□□□□□ -1.51
CUL4A-201ENST00000326335 A0A0D9SG42 100 aa5.59□□□□□ -1.51
CUL4A-201ENST00000326335 XP32Q5T750 250 aa5.59□□□□□ -1.51
CUL4A-201ENST00000326335 CRIPTQ9P021 101 aa5.57□□□□□ -1.52
CUL4A-201ENST00000326335 MUC2Q02817 5179 aa5.56□□□□□ -1.52
CUL4A-201ENST00000326335 J3QL48 77 aa5.54□□□□□ -1.52
CUL4A-201ENST00000326335 MT1HL1P0DM35 61 aa5.53□□□□□ -1.52
CUL4A-201ENST00000326335 COX6B2Q6YFQ2 88 aa5.53□□□□□ -1.52
CUL4A-201ENST00000326335 KTN1-AS1Q86SY8 53 aa5.53□□□□□ -1.52
CUL4A-201ENST00000326335 RBM12B-AS1Q9P1G2 102 aa5.53□□□□□ -1.52
CUL4A-201ENST00000326335 A6NN06 94 aa5.52□□□□□ -1.53
CUL4A-201ENST00000326335 A0A1B0GU33 70 aa5.51□□□□□ -1.53
CUL4A-201ENST00000326335 RPL37P61927 97 aaKnown RBP5.51□□□□□ -1.53
CUL4A-201ENST00000326335 HERC2O95714 4834 aa5.48□□□□□ -1.53
CUL4A-201ENST00000326335 H0YAA0 97 aa5.47□□□□□ -1.53
CUL4A-201ENST00000326335 LINC01554Q52M75 96 aa5.45□□□□□ -1.54
CUL4A-201ENST00000326335 S4R3F8 94 aa5.45□□□□□ -1.54
CUL4A-201ENST00000326335 H1FX-AS1Q4G0G2 97 aa5.41□□□□□ -1.54
CUL4A-201ENST00000326335 HERC1Q15751 4861 aa5.41□□□□□ -1.54
CUL4A-201ENST00000326335 P0C880 135 aa5.4□□□□□ -1.54
CUL4A-201ENST00000326335 CSAG1Q6PB30 78 aa5.4□□□□□ -1.54
CUL4A-201ENST00000326335 SPINT4Q6UDR6 99 aa5.37□□□□□ -1.55
CUL4A-201ENST00000326335 KRTAP3-3Q9BYR6 98 aa5.35□□□□□ -1.55
CUL4A-201ENST00000326335 KRTAP13-4Q3LI77 160 aa5.34□□□□□ -1.55
CUL4A-201ENST00000326335 RNF213Q63HN8 5207 aa5.32□□□□□ -1.56
CUL4A-201ENST00000326335 K7ERS5 55 aa5.3□□□□□ -1.56
CUL4A-201ENST00000326335 PCLOQ9Y6V0 5065 aa5.29□□□□□ -1.56
CUL4A-201ENST00000326335 KRTAP10-6P60371 365 aaPredicted RBP5.28□□□□□ -1.56
CUL4A-201ENST00000326335 TPRXLQ17RH7 258 aa5.27□□□□□ -1.57
CUL4A-201ENST00000326335 FAT4Q6V0I7 4981 aa5.27□□□□□ -1.57
CUL4A-201ENST00000326335 KRTAP4-1Q9BYQ7 146 aa5.24□□□□□ -1.57
CUL4A-201ENST00000326335 KRTAP3-2Q9BYR7 98 aa5.23□□□□□ -1.57
CUL4A-201ENST00000326335 C10orf95Q9H7T3 257 aa5.21□□□□□ -1.58
CUL4A-201ENST00000326335 M0QZ58 72 aa5.2□□□□□ -1.58
CUL4A-201ENST00000326335 SEC61BP60468 96 aaKnown RBP5.2□□□□□ -1.58
CUL4A-201ENST00000326335 R4GN34 69 aa5.17□□□□□ -1.58
CUL4A-201ENST00000326335 UBR4Q5T4S7 5183 aa5.17□□□□□ -1.58
CUL4A-201ENST00000326335 KRTAP12-2P59991 146 aa5.17□□□□□ -1.58
CUL4A-201ENST00000326335 LORP23490 312 aaPredicted RBP5.14□□□□□ -1.59
CUL4A-201ENST00000326335 BIRC6Q9NR09 4857 aa5.13□□□□□ -1.59
CUL4A-201ENST00000326335 ROMO1P60602 79 aa5.08□□□□□ -1.6
CUL4A-201ENST00000326335 M0R2T5 61 aa5.07□□□□□ -1.6
CUL4A-201ENST00000326335 KRTAP25-1Q3LHN0 102 aa5.05□□□□□ -1.6
CUL4A-201ENST00000326335 MUC17Q685J3 4493 aa5.05□□□□□ -1.6
CUL4A-201ENST00000326335 KRTAP12-1P59990 96 aa5.04□□□□□ -1.6
CUL4A-201ENST00000326335 HMCN2Q8NDA2 5059 aa4.98□□□□□ -1.61
CUL4A-201ENST00000326335 CAMK2N1Q7Z7J9 78 aa4.98□□□□□ -1.61
CUL4A-201ENST00000326335 H3BS24 57 aa4.92□□□□□ -1.62
CUL4A-201ENST00000326335 FLGP20930 4061 aaPredicted RBP4.84□□□□□ -1.64
CUL4A-201ENST00000326335 KRTAP19-2Q3LHN2 52 aa4.83□□□□□ -1.64
CUL4A-201ENST00000326335 KRTAP10-10P60014 251 aa4.77□□□□□ -1.65
CUL4A-201ENST00000326335 NDUFAF8A1L188 74 aa4.76□□□□□ -1.65
CUL4A-201ENST00000326335 FSIP2Q5CZC0 6907 aa4.74□□□□□ -1.65
CUL4A-201ENST00000326335 USH2AO75445 5202 aa4.73□□□□□ -1.65
CUL4A-201ENST00000326335 LCE2CQ5TA81 110 aa4.7□□□□□ -1.66
CUL4A-201ENST00000326335 MT1HP80294 61 aa4.67□□□□□ -1.66
CUL4A-201ENST00000326335 PLAC4Q8WY50 150 aa4.66□□□□□ -1.66
CUL4A-201ENST00000326335 MT1FP04733 61 aa4.61□□□□□ -1.67
CUL4A-201ENST00000326335 MT2AP02795 61 aa4.57□□□□□ -1.68
CUL4A-201ENST00000326335 TNP1P09430 55 aa4.57□□□□□ -1.68
CUL4A-201ENST00000326335 KRTAP19-1Q8IUB9 90 aa4.55□□□□□ -1.68
CUL4A-201ENST00000326335 KMT2DO14686 5537 aa4.53□□□□□ -1.68
CUL4A-201ENST00000326335 KRTAP15-1Q3LI76 137 aa4.52□□□□□ -1.69
CUL4A-201ENST00000326335 KRTAP9-8Q9BYQ0 159 aa4.48□□□□□ -1.69
CUL4A-201ENST00000326335 SPRR2GQ9BYE4 73 aa4.43□□□□□ -1.7
CUL4A-201ENST00000326335 LCE3AQ5TA76 89 aa4.41□□□□□ -1.7
CUL4A-201ENST00000326335 LUZP6Q538Z0 58 aa4.36□□□□□ -1.71
CUL4A-201ENST00000326335 PP632Q6XCG6 107 aa4.35□□□□□ -1.71
CUL4A-201ENST00000326335 MT1BP07438 61 aa4.33□□□□□ -1.72
CUL4A-201ENST00000326335 KRTAP10-7P60409 375 aaPredicted RBP4.29□□□□□ -1.72
CUL4A-201ENST00000326335 MT1XP80297 61 aa4.28□□□□□ -1.72
CUL4A-201ENST00000326335 KRTAP9-3Q9BYQ3 159 aa4.28□□□□□ -1.73
CUL4A-201ENST00000326335 KRTAP10-5P60370 271 aa4.27□□□□□ -1.73
CUL4A-201ENST00000326335 LCE2BO14633 110 aa4.25□□□□□ -1.73
CUL4A-201ENST00000326335 KRTAP10-12P60413 245 aa4.23□□□□□ -1.73
CUL4A-201ENST00000326335 KRTAP19-8Q3LI54 63 aa4.2□□□□□ -1.74
CUL4A-201ENST00000326335 KRTAP4-8A0A0G2JLE6 195 aa4.2□□□□□ -1.74
CUL4A-201ENST00000326335 KRTAP4-8Q9BYQ9 185 aa4.2□□□□□ -1.74
CUL4A-201ENST00000326335 DSTQ03001 7570 aaKnown RBP4.15□□□□□ -1.74
CUL4A-201ENST00000326335 KRTAP12-3P60328 96 aa4.15□□□□□ -1.74
CUL4A-201ENST00000326335 PRO2289Q9P1D8 64 aa4.15□□□□□ -1.74
CUL4A-201ENST00000326335 KRTAP23-1A1A580 65 aa4.12□□□□□ -1.75
CUL4A-201ENST00000326335 SSPOA2VEC9 5147 aa4.11□□□□□ -1.75
CUL4A-201ENST00000326335 LCE2AQ5TA79 106 aaPredicted RBP4.09□□□□□ -1.75
CUL4A-201ENST00000326335 KRTAP19-5Q3LI72 72 aa4.07□□□□□ -1.76
CUL4A-201ENST00000326335 MUC12Q9UKN1 5478 aa4.05□□□□□ -1.76
CUL4A-201ENST00000326335 KRTAP8-1Q8IUC2 63 aa4.03□□□□□ -1.76
CUL4A-201ENST00000326335 A0A0A0MQY5 61 aa4.02□□□□□ -1.77
CUL4A-201ENST00000326335 KRTAP4-7Q9BYR0 210 aa4.01□□□□□ -1.77
CUL4A-201ENST00000326335 FCGBPQ9Y6R7 5405 aaPredicted RBP3.99□□□□□ -1.77
CUL4A-201ENST00000326335 OBSCNQ5VST9 7968 aa3.98□□□□□ -1.77
CUL4A-201ENST00000326335 CRCT1Q9UGL9 99 aa3.91□□□□□ -1.78
CUL4A-201ENST00000326335 SYNE1Q8NF91 8797 aaKnown RBP3.9□□□□□ -1.79
CUL4A-201ENST00000326335 SPRR5A0A1B0GTR4 108 aa3.88□□□□□ -1.79
CUL4A-201ENST00000326335 SYNE2Q8WXH0 6885 aaKnown RBP3.83□□□□□ -1.8
CUL4A-201ENST00000326335 MACF1Q9UPN3 7388 aaKnown RBP3.82□□□□□ -1.8
CUL4A-201ENST00000326335 LCE3CQ5T5A8 94 aa3.82□□□□□ -1.8
CUL4A-201ENST00000326335 KRTAP19-7Q3SYF9 63 aa3.8□□□□□ -1.8
CUL4A-201ENST00000326335 KRTAP4-3Q9BYR4 195 aa3.79□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 74.9 ms