RNA–Protein interactions for RNA: ENST00000326279.10

LIN28A-202, Transcript of lin-28 homolog A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LIN28A, Length 4,008 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIN28A-202ENST00000326279 SPATA8Q6RVD6 105 aa6.96□□□□□ -1.3
LIN28A-202ENST00000326279 LRP1Q07954 4544 aaKnown RBP6.96□□□□□ -1.3
LIN28A-202ENST00000326279 FRAS1Q86XX4 4008 aa6.95□□□□□ -1.3
LIN28A-202ENST00000326279 KRTAP17-1Q9BYP8 105 aa6.92□□□□□ -1.3
LIN28A-202ENST00000326279 TPRXLQ17RH7 258 aa6.86□□□□□ -1.31
LIN28A-202ENST00000326279 PRAC1Q96KF2 57 aa6.85□□□□□ -1.31
LIN28A-202ENST00000326279 CRIPTQ9P021 101 aa6.85□□□□□ -1.31
LIN28A-202ENST00000326279 EPPK1P58107 5090 aaKnown RBP6.85□□□□□ -1.31
LIN28A-202ENST00000326279 ADM2Q7Z4H4 148 aa6.85□□□□□ -1.31
LIN28A-202ENST00000326279 H1FX-AS1Q4G0G2 97 aa6.83□□□□□ -1.32
LIN28A-202ENST00000326279 KTN1-AS1Q86SY8 53 aa6.83□□□□□ -1.32
LIN28A-202ENST00000326279 FAT2Q9NYQ8 4349 aa6.83□□□□□ -1.32
LIN28A-202ENST00000326279 HECTD4Q9Y4D8 3996 aa6.81□□□□□ -1.32
LIN28A-202ENST00000326279 R4GN34 69 aa6.81□□□□□ -1.32
LIN28A-202ENST00000326279 HERC2O95714 4834 aa6.79□□□□□ -1.32
LIN28A-202ENST00000326279 M0QZ58 72 aa6.75□□□□□ -1.33
LIN28A-202ENST00000326279 H3BS24 57 aa6.74□□□□□ -1.33
LIN28A-202ENST00000326279 CAMK2N1Q7Z7J9 78 aa6.69□□□□□ -1.34
LIN28A-202ENST00000326279 KRTAP3-1Q9BYR8 98 aa6.68□□□□□ -1.34
LIN28A-202ENST00000326279 PKD1P98161 4303 aa6.64□□□□□ -1.35
LIN28A-202ENST00000326279 HSPG2P98160 4391 aa6.61□□□□□ -1.35
LIN28A-202ENST00000326279 P0C880 135 aa6.61□□□□□ -1.35
LIN28A-202ENST00000326279 LRP2P98164 4655 aa6.6□□□□□ -1.35
LIN28A-202ENST00000326279 A6NN06 94 aa6.59□□□□□ -1.35
LIN28A-202ENST00000326279 H0YAA0 97 aa6.58□□□□□ -1.36
LIN28A-202ENST00000326279 BIRC6Q9NR09 4857 aa6.56□□□□□ -1.36
LIN28A-202ENST00000326279 ABCA13Q86UQ4 5058 aa6.54□□□□□ -1.36
LIN28A-202ENST00000326279 ROMO1P60602 79 aa6.49□□□□□ -1.37
LIN28A-202ENST00000326279 KRTAP10-10P60014 251 aa6.45□□□□□ -1.38
LIN28A-202ENST00000326279 LCE2DQ5TA82 110 aaPredicted RBP6.45□□□□□ -1.38
LIN28A-202ENST00000326279 HERC1Q15751 4861 aa6.42□□□□□ -1.38
LIN28A-202ENST00000326279 PCLOQ9Y6V0 5065 aa6.42□□□□□ -1.38
LIN28A-202ENST00000326279 KRTAP3-3Q9BYR6 98 aa6.41□□□□□ -1.38
LIN28A-202ENST00000326279 KRTAP3-2Q9BYR7 98 aa6.41□□□□□ -1.38
LIN28A-202ENST00000326279 LPAP08519 4548 aa6.4□□□□□ -1.38
LIN28A-202ENST00000326279 KRTAP4-1Q9BYQ7 146 aa6.38□□□□□ -1.39
LIN28A-202ENST00000326279 C10orf95Q9H7T3 257 aa6.32□□□□□ -1.4
LIN28A-202ENST00000326279 PLAC4Q8WY50 150 aa6.32□□□□□ -1.4
LIN28A-202ENST00000326279 KRTAP13-4Q3LI77 160 aa6.31□□□□□ -1.4
LIN28A-202ENST00000326279 KRTAP10-6P60371 365 aaPredicted RBP6.3□□□□□ -1.4
LIN28A-202ENST00000326279 RNF213Q63HN8 5207 aa6.29□□□□□ -1.4
LIN28A-202ENST00000326279 KRTAP25-1Q3LHN0 102 aa6.27□□□□□ -1.41
LIN28A-202ENST00000326279 MUC2Q02817 5179 aa6.25□□□□□ -1.41
LIN28A-202ENST00000326279 KRTAP12-2P59991 146 aa6.24□□□□□ -1.41
LIN28A-202ENST00000326279 UBR4Q5T4S7 5183 aa6.19□□□□□ -1.42
LIN28A-202ENST00000326279 PKHD1L1Q86WI1 4243 aa6.16□□□□□ -1.42
LIN28A-202ENST00000326279 KRTAP12-1P59990 96 aa6.14□□□□□ -1.43
LIN28A-202ENST00000326279 A0A0A0MQY5 61 aa6.09□□□□□ -1.43
LIN28A-202ENST00000326279 FSIP2Q5CZC0 6907 aa6.07□□□□□ -1.44
LIN28A-202ENST00000326279 TNXBP22105 4242 aa6.07□□□□□ -1.44
LIN28A-202ENST00000326279 LORP23490 312 aaPredicted RBP6.07□□□□□ -1.44
LIN28A-202ENST00000326279 TNP1P09430 55 aa6.05□□□□□ -1.44
LIN28A-202ENST00000326279 FAT4Q6V0I7 4981 aa6.04□□□□□ -1.44
LIN28A-202ENST00000326279 LUZP6Q538Z0 58 aa6.01□□□□□ -1.45
LIN28A-202ENST00000326279 MT1HP80294 61 aa5.94□□□□□ -1.46
LIN28A-202ENST00000326279 HMCN2Q8NDA2 5059 aa5.89□□□□□ -1.47
LIN28A-202ENST00000326279 NDUFAF8A1L188 74 aa5.82□□□□□ -1.48
LIN28A-202ENST00000326279 MT2AP02795 61 aa5.77□□□□□ -1.49
LIN28A-202ENST00000326279 MT1FP04733 61 aa5.76□□□□□ -1.49
LIN28A-202ENST00000326279 PP632Q6XCG6 107 aa5.75□□□□□ -1.49
LIN28A-202ENST00000326279 PRO2289Q9P1D8 64 aa5.74□□□□□ -1.49
LIN28A-202ENST00000326279 LCE2CQ5TA81 110 aa5.72□□□□□ -1.49
LIN28A-202ENST00000326279 KRTAP19-2Q3LHN2 52 aa5.63□□□□□ -1.51
LIN28A-202ENST00000326279 LCE2BO14633 110 aa5.61□□□□□ -1.51
LIN28A-202ENST00000326279 MUC17Q685J3 4493 aa5.56□□□□□ -1.52
LIN28A-202ENST00000326279 KRTAP9-8Q9BYQ0 159 aa5.52□□□□□ -1.53
LIN28A-202ENST00000326279 KRTAP19-1Q8IUB9 90 aa5.49□□□□□ -1.53
LIN28A-202ENST00000326279 FLGP20930 4061 aaPredicted RBP5.48□□□□□ -1.53
LIN28A-202ENST00000326279 SPRR2GQ9BYE4 73 aa5.45□□□□□ -1.54
LIN28A-202ENST00000326279 USH2AO75445 5202 aa5.44□□□□□ -1.54
LIN28A-202ENST00000326279 LCE3AQ5TA76 89 aa5.41□□□□□ -1.54
LIN28A-202ENST00000326279 KRTAP10-12P60413 245 aa5.4□□□□□ -1.54
LIN28A-202ENST00000326279 KRTAP9-3Q9BYQ3 159 aa5.32□□□□□ -1.56
LIN28A-202ENST00000326279 KRTAP15-1Q3LI76 137 aa5.32□□□□□ -1.56
LIN28A-202ENST00000326279 LCE2AQ5TA79 106 aaPredicted RBP5.3□□□□□ -1.56
LIN28A-202ENST00000326279 MT1BP07438 61 aa5.27□□□□□ -1.57
LIN28A-202ENST00000326279 KRTAP12-3P60328 96 aa5.27□□□□□ -1.57
LIN28A-202ENST00000326279 CRCT1Q9UGL9 99 aa5.2□□□□□ -1.58
LIN28A-202ENST00000326279 KRTAP10-7P60409 375 aaPredicted RBP5.19□□□□□ -1.58
LIN28A-202ENST00000326279 KRTAP19-8Q3LI54 63 aa5.19□□□□□ -1.58
LIN28A-202ENST00000326279 KRTAP8-1Q8IUC2 63 aa5.19□□□□□ -1.58
LIN28A-202ENST00000326279 MT1XP80297 61 aa5.15□□□□□ -1.58
LIN28A-202ENST00000326279 KRTAP4-8A0A0G2JLE6 195 aa5.15□□□□□ -1.59
LIN28A-202ENST00000326279 KRTAP4-8Q9BYQ9 185 aa5.15□□□□□ -1.59
LIN28A-202ENST00000326279 KRTAP10-5P60370 271 aa5.12□□□□□ -1.59
LIN28A-202ENST00000326279 KRTAP23-1A1A580 65 aa5.08□□□□□ -1.6
LIN28A-202ENST00000326279 KRTAP9-2Q9BYQ4 174 aa5.07□□□□□ -1.6
LIN28A-202ENST00000326279 SPRR2FQ96RM1 72 aa5.06□□□□□ -1.6
LIN28A-202ENST00000326279 KMT2DO14686 5537 aa5.03□□□□□ -1.6
LIN28A-202ENST00000326279 KRTAP19-5Q3LI72 72 aa5.01□□□□□ -1.61
LIN28A-202ENST00000326279 OBSCNQ5VST9 7968 aa4.97□□□□□ -1.61
LIN28A-202ENST00000326279 DSTQ03001 7570 aaKnown RBP4.96□□□□□ -1.62
LIN28A-202ENST00000326279 SSPOA2VEC9 5147 aa4.88□□□□□ -1.63
LIN28A-202ENST00000326279 SYNE1Q8NF91 8797 aaKnown RBP4.84□□□□□ -1.64
LIN28A-202ENST00000326279 SYNE2Q8WXH0 6885 aaKnown RBP4.83□□□□□ -1.64
LIN28A-202ENST00000326279 FCGBPQ9Y6R7 5405 aaPredicted RBP4.78□□□□□ -1.64
LIN28A-202ENST00000326279 KRTAP19-6Q3LI70 58 aa4.75□□□□□ -1.65
LIN28A-202ENST00000326279 MACF1Q9UPN3 7388 aaKnown RBP4.75□□□□□ -1.65
LIN28A-202ENST00000326279 KRTAP4-7Q9BYR0 210 aa4.74□□□□□ -1.65
LIN28A-202ENST00000326279 MUC12Q9UKN1 5478 aa4.73□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms