RNA–Protein interactions for RNA: ENST00000321895.6

CCDC71-201, Transcript of coiled-coil domain containing 71, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCDC71, Length 1,781 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC71-201ENST00000321895 LCA10Q71F78 164 aa9.68□□□□□ -0.86
CCDC71-201ENST00000321895 FLGP20930 4061 aaPredicted RBP9.66□□□□□ -0.86
CCDC71-201ENST00000321895 RPS28P62857 69 aaKnown RBP9.65□□□□□ -0.87
CCDC71-201ENST00000321895 KRTAP3-3Q9BYR6 98 aa9.62□□□□□ -0.87
CCDC71-201ENST00000321895 SPTSSBQ8NFR3 76 aa9.61□□□□□ -0.87
CCDC71-201ENST00000321895 FAT4Q6V0I7 4981 aa9.55□□□□□ -0.88
CCDC71-201ENST00000321895 SVIPQ8NHG7 77 aa9.55□□□□□ -0.88
CCDC71-201ENST00000321895 CSAG1Q6PB30 78 aa9.54□□□□□ -0.88
CCDC71-201ENST00000321895 MT1HP80294 61 aa9.52□□□□□ -0.88
CCDC71-201ENST00000321895 SMIM26A0A096LP01 95 aa9.47□□□□□ -0.89
CCDC71-201ENST00000321895 M0R2T5 61 aa9.42□□□□□ -0.9
CCDC71-201ENST00000321895 LINC01558Q9Y6Z2 57 aa9.35□□□□□ -0.91
CCDC71-201ENST00000321895 Q1T7F1 81 aa9.35□□□□□ -0.91
CCDC71-201ENST00000321895 V9GYY9 64 aa9.35□□□□□ -0.91
CCDC71-201ENST00000321895 H0YAA0 97 aa9.33□□□□□ -0.92
CCDC71-201ENST00000321895 LCE2AQ5TA79 106 aaPredicted RBP9.31□□□□□ -0.92
CCDC71-201ENST00000321895 SEC61GP60059 68 aa9.29□□□□□ -0.92
CCDC71-201ENST00000321895 A0A1B0GU69 56 aa9.27□□□□□ -0.92
CCDC71-201ENST00000321895 ADM2Q7Z4H4 148 aa9.25□□□□□ -0.93
CCDC71-201ENST00000321895 PRR15LQ9BU68 103 aa9.24□□□□□ -0.93
CCDC71-201ENST00000321895 KRTAP3-2Q9BYR7 98 aa9.23□□□□□ -0.93
CCDC71-201ENST00000321895 KRTAP10-6P60371 365 aaPredicted RBP9.21□□□□□ -0.94
CCDC71-201ENST00000321895 PSPHP1O15172 72 aa9.17□□□□□ -0.94
CCDC71-201ENST00000321895 P0C880 135 aa9.17□□□□□ -0.94
CCDC71-201ENST00000321895 LORP23490 312 aaPredicted RBP9.17□□□□□ -0.94
CCDC71-201ENST00000321895 KRTAP9-8Q9BYQ0 159 aa9.14□□□□□ -0.95
CCDC71-201ENST00000321895 MT2AP02795 61 aa9.1□□□□□ -0.95
CCDC71-201ENST00000321895 Q5VV11 94 aa9.09□□□□□ -0.95
CCDC71-201ENST00000321895 A0A1B0GU33 70 aa9.05□□□□□ -0.96
CCDC71-201ENST00000321895 MT1FP04733 61 aa9.04□□□□□ -0.96
CCDC71-201ENST00000321895 KRTAP10-10P60014 251 aa9.02□□□□□ -0.97
CCDC71-201ENST00000321895 CRIPTQ9P021 101 aa9□□□□□ -0.97
CCDC71-201ENST00000321895 UQCR11O14957 56 aa8.96□□□□□ -0.97
CCDC71-201ENST00000321895 M0QZ58 72 aa8.96□□□□□ -0.98
CCDC71-201ENST00000321895 R4GN34 69 aa8.96□□□□□ -0.98
CCDC71-201ENST00000321895 KRTAP13-4Q3LI77 160 aa8.91□□□□□ -0.98
CCDC71-201ENST00000321895 A6NED7 52 aa8.9□□□□□ -0.98
CCDC71-201ENST00000321895 SPATA8Q6RVD6 105 aa8.89□□□□□ -0.99
CCDC71-201ENST00000321895 PRO0628Q9UI54 55 aa8.87□□□□□ -0.99
CCDC71-201ENST00000321895 SPRR2GQ9BYE4 73 aa8.84□□□□□ -0.99
CCDC71-201ENST00000321895 MIR22HGQ0VDD5 57 aa8.84□□□□□ -1
CCDC71-201ENST00000321895 KRTAP9-3Q9BYQ3 159 aa8.83□□□□□ -1
CCDC71-201ENST00000321895 KRTAP19-1Q8IUB9 90 aa8.81□□□□□ -1
CCDC71-201ENST00000321895 LINC01554Q52M75 96 aa8.75□□□□□ -1.01
CCDC71-201ENST00000321895 A0A0D9SG42 100 aa8.73□□□□□ -1.01
CCDC71-201ENST00000321895 A8MU10 97 aa8.73□□□□□ -1.01
CCDC71-201ENST00000321895 CDC42SE1Q9NRR8 79 aa8.73□□□□□ -1.01
CCDC71-201ENST00000321895 BRK1Q8WUW1 75 aa8.7□□□□□ -1.02
CCDC71-201ENST00000321895 A6NN06 94 aa8.65□□□□□ -1.02
CCDC71-201ENST00000321895 KRTAP19-8Q3LI54 63 aa8.64□□□□□ -1.03
CCDC71-201ENST00000321895 LCE2BO14633 110 aa8.6□□□□□ -1.03
CCDC71-201ENST00000321895 KRTAP12-1P59990 96 aa8.58□□□□□ -1.04
CCDC71-201ENST00000321895 LCE2DQ5TA82 110 aaPredicted RBP8.54□□□□□ -1.04
CCDC71-201ENST00000321895 SPINT4Q6UDR6 99 aa8.54□□□□□ -1.04
CCDC71-201ENST00000321895 KRTAP12-2P59991 146 aa8.53□□□□□ -1.04
CCDC71-201ENST00000321895 MT1BP07438 61 aa8.52□□□□□ -1.05
CCDC71-201ENST00000321895 K7ERS5 55 aa8.5□□□□□ -1.05
CCDC71-201ENST00000321895 PLAC4Q8WY50 150 aa8.5□□□□□ -1.05
CCDC71-201ENST00000321895 USH2AO75445 5202 aa8.4□□□□□ -1.07
CCDC71-201ENST00000321895 CAMK2N1Q7Z7J9 78 aa8.36□□□□□ -1.07
CCDC71-201ENST00000321895 KRTAP9-6A0A140TA67 174 aa8.34□□□□□ -1.07
CCDC71-201ENST00000321895 KRTAP9-2Q9BYQ4 174 aa8.3□□□□□ -1.08
CCDC71-201ENST00000321895 PMAIP1Q13794 54 aa8.27□□□□□ -1.08
CCDC71-201ENST00000321895 MT1XP80297 61 aa8.2□□□□□ -1.1
CCDC71-201ENST00000321895 KRTAP10-5P60370 271 aa8.17□□□□□ -1.1
CCDC71-201ENST00000321895 PRO2289Q9P1D8 64 aa8.17□□□□□ -1.1
CCDC71-201ENST00000321895 KRTAP19-6Q3LI70 58 aa8.15□□□□□ -1.1
CCDC71-201ENST00000321895 SSPOA2VEC9 5147 aa8.15□□□□□ -1.11
CCDC71-201ENST00000321895 KTN1-AS1Q86SY8 53 aa8.14□□□□□ -1.11
CCDC71-201ENST00000321895 C10orf95Q9H7T3 257 aa8.12□□□□□ -1.11
CCDC71-201ENST00000321895 FSIP2Q5CZC0 6907 aa8.1□□□□□ -1.11
CCDC71-201ENST00000321895 ROMO1P60602 79 aa8.09□□□□□ -1.11
CCDC71-201ENST00000321895 CRCT1Q9UGL9 99 aa7.97□□□□□ -1.13
CCDC71-201ENST00000321895 TNP1P09430 55 aa7.93□□□□□ -1.14
CCDC71-201ENST00000321895 KRTAP25-1Q3LHN0 102 aa7.91□□□□□ -1.14
CCDC71-201ENST00000321895 FCGBPQ9Y6R7 5405 aaPredicted RBP7.86□□□□□ -1.15
CCDC71-201ENST00000321895 KRTAP10-7P60409 375 aaPredicted RBP7.84□□□□□ -1.15
CCDC71-201ENST00000321895 KRTAP10-12P60413 245 aa7.79□□□□□ -1.16
CCDC71-201ENST00000321895 KRTAP23-1A1A580 65 aa7.65□□□□□ -1.18
CCDC71-201ENST00000321895 PRAC1Q96KF2 57 aa7.65□□□□□ -1.18
CCDC71-201ENST00000321895 LCE3AQ5TA76 89 aa7.61□□□□□ -1.19
CCDC71-201ENST00000321895 PP632Q6XCG6 107 aa7.6□□□□□ -1.19
CCDC71-201ENST00000321895 KRTAP4-8A0A0G2JLE6 195 aa7.57□□□□□ -1.2
CCDC71-201ENST00000321895 KRTAP4-8Q9BYQ9 185 aa7.57□□□□□ -1.2
CCDC71-201ENST00000321895 KMT2DO14686 5537 aa7.51□□□□□ -1.21
CCDC71-201ENST00000321895 KRTAP8-1Q8IUC2 63 aa7.47□□□□□ -1.21
CCDC71-201ENST00000321895 MACF1Q9UPN3 7388 aaKnown RBP7.42□□□□□ -1.22
CCDC71-201ENST00000321895 KRTAP9-1A8MXZ3 250 aaPredicted RBP7.39□□□□□ -1.23
CCDC71-201ENST00000321895 KRTAP9-7A8MTY7 169 aa7.36□□□□□ -1.23
CCDC71-201ENST00000321895 KRTAP19-5Q3LI72 72 aa7.36□□□□□ -1.23
CCDC71-201ENST00000321895 KRTAP12-3P60328 96 aa7.33□□□□□ -1.24
CCDC71-201ENST00000321895 KRTAP19-7Q3SYF9 63 aa7.31□□□□□ -1.24
CCDC71-201ENST00000321895 KRTAP5-9P26371 169 aa7.21□□□□□ -1.25
CCDC71-201ENST00000321895 MT1EP04732 61 aa7.2□□□□□ -1.26
CCDC71-201ENST00000321895 SPRR2FQ96RM1 72 aa7.2□□□□□ -1.26
CCDC71-201ENST00000321895 SYNE2Q8WXH0 6885 aaKnown RBP7.2□□□□□ -1.26
CCDC71-201ENST00000321895 KRTAP6-3Q3LI67 103 aa7.18□□□□□ -1.26
CCDC71-201ENST00000321895 KRTAP15-1Q3LI76 137 aa7.13□□□□□ -1.27
CCDC71-201ENST00000321895 MUC12Q9UKN1 5478 aa7.04□□□□□ -1.28
CCDC71-201ENST00000321895 MT1LQ93083 61 aa7.03□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 94.9 ms