RNA–Protein interactions for RNA: ENST00000321265.9

NUDC-201, Transcript of nuclear distribution C, dynein complex regulator, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NUDC, Length 1,800 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUDC-201ENST00000321265 KRTAP19-2Q3LHN2 52 aa8.96□□□□□ -0.97
NUDC-201ENST00000321265 Q1T7F1 81 aa8.94□□□□□ -0.98
NUDC-201ENST00000321265 FLGP20930 4061 aaPredicted RBP8.88□□□□□ -0.99
NUDC-201ENST00000321265 LCE2CQ5TA81 110 aa8.88□□□□□ -0.99
NUDC-201ENST00000321265 V9GYY9 64 aa8.87□□□□□ -0.99
NUDC-201ENST00000321265 H1FX-AS1Q4G0G2 97 aa8.82□□□□□ -1
NUDC-201ENST00000321265 LINC01558Q9Y6Z2 57 aa8.82□□□□□ -1
NUDC-201ENST00000321265 PSPHP1O15172 72 aa8.77□□□□□ -1
NUDC-201ENST00000321265 SPTSSBQ8NFR3 76 aa8.76□□□□□ -1.01
NUDC-201ENST00000321265 PRR15LQ9BU68 103 aa8.75□□□□□ -1.01
NUDC-201ENST00000321265 MT1HP80294 61 aa8.73□□□□□ -1.01
NUDC-201ENST00000321265 S4R3F8 94 aa8.71□□□□□ -1.01
NUDC-201ENST00000321265 Q5VV11 94 aa8.7□□□□□ -1.02
NUDC-201ENST00000321265 LCA10Q71F78 164 aa8.7□□□□□ -1.02
NUDC-201ENST00000321265 KRTAP3-3Q9BYR6 98 aa8.7□□□□□ -1.02
NUDC-201ENST00000321265 LCE2AQ5TA79 106 aaPredicted RBP8.68□□□□□ -1.02
NUDC-201ENST00000321265 M0R2T5 61 aa8.64□□□□□ -1.03
NUDC-201ENST00000321265 A0A1B0GU69 56 aa8.64□□□□□ -1.03
NUDC-201ENST00000321265 SEC61GP60059 68 aa8.54□□□□□ -1.04
NUDC-201ENST00000321265 CSAG1Q6PB30 78 aa8.52□□□□□ -1.04
NUDC-201ENST00000321265 A6NED7 52 aa8.48□□□□□ -1.05
NUDC-201ENST00000321265 KRTAP10-6P60371 365 aaPredicted RBP8.46□□□□□ -1.06
NUDC-201ENST00000321265 BRK1Q8WUW1 75 aa8.46□□□□□ -1.06
NUDC-201ENST00000321265 LORP23490 312 aaPredicted RBP8.41□□□□□ -1.06
NUDC-201ENST00000321265 KRTAP3-2Q9BYR7 98 aa8.41□□□□□ -1.06
NUDC-201ENST00000321265 UQCR11O14957 56 aa8.38□□□□□ -1.07
NUDC-201ENST00000321265 A8MU10 97 aa8.37□□□□□ -1.07
NUDC-201ENST00000321265 A0A1B0GU33 70 aa8.36□□□□□ -1.07
NUDC-201ENST00000321265 KRTAP9-8Q9BYQ0 159 aa8.36□□□□□ -1.07
NUDC-201ENST00000321265 CDC42SE1Q9NRR8 79 aa8.36□□□□□ -1.07
NUDC-201ENST00000321265 H0YAA0 97 aa8.33□□□□□ -1.08
NUDC-201ENST00000321265 ADM2Q7Z4H4 148 aa8.33□□□□□ -1.08
NUDC-201ENST00000321265 P0C880 135 aa8.32□□□□□ -1.08
NUDC-201ENST00000321265 SPATA8Q6RVD6 105 aa8.32□□□□□ -1.08
NUDC-201ENST00000321265 PRO0628Q9UI54 55 aa8.31□□□□□ -1.08
NUDC-201ENST00000321265 MT2AP02795 61 aa8.31□□□□□ -1.08
NUDC-201ENST00000321265 MIR22HGQ0VDD5 57 aa8.31□□□□□ -1.08
NUDC-201ENST00000321265 MT1FP04733 61 aa8.26□□□□□ -1.09
NUDC-201ENST00000321265 KRTAP10-10P60014 251 aa8.23□□□□□ -1.09
NUDC-201ENST00000321265 KRTAP13-4Q3LI77 160 aa8.19□□□□□ -1.1
NUDC-201ENST00000321265 M0QZ58 72 aa8.08□□□□□ -1.12
NUDC-201ENST00000321265 KRTAP9-3Q9BYQ3 159 aa8.06□□□□□ -1.12
NUDC-201ENST00000321265 KRTAP9-2Q9BYQ4 174 aa8.06□□□□□ -1.12
NUDC-201ENST00000321265 LCE2DQ5TA82 110 aaPredicted RBP8.03□□□□□ -1.12
NUDC-201ENST00000321265 R4GN34 69 aa8.02□□□□□ -1.13
NUDC-201ENST00000321265 A0A0D9SG42 100 aa8.01□□□□□ -1.13
NUDC-201ENST00000321265 PMAIP1Q13794 54 aa8□□□□□ -1.13
NUDC-201ENST00000321265 KRTAP19-1Q8IUB9 90 aa8□□□□□ -1.13
NUDC-201ENST00000321265 CRIPTQ9P021 101 aa8□□□□□ -1.13
NUDC-201ENST00000321265 FSIP2Q5CZC0 6907 aa7.98□□□□□ -1.13
NUDC-201ENST00000321265 A6NN06 94 aa7.96□□□□□ -1.13
NUDC-201ENST00000321265 SPRR2GQ9BYE4 73 aa7.96□□□□□ -1.14
NUDC-201ENST00000321265 LCE2BO14633 110 aa7.91□□□□□ -1.14
NUDC-201ENST00000321265 LINC01554Q52M75 96 aa7.89□□□□□ -1.15
NUDC-201ENST00000321265 K7ERS5 55 aa7.89□□□□□ -1.15
NUDC-201ENST00000321265 USH2AO75445 5202 aa7.87□□□□□ -1.15
NUDC-201ENST00000321265 KRTAP12-1P59990 96 aa7.87□□□□□ -1.15
NUDC-201ENST00000321265 KRTAP12-2P59991 146 aa7.85□□□□□ -1.15
NUDC-201ENST00000321265 SPINT4Q6UDR6 99 aa7.82□□□□□ -1.16
NUDC-201ENST00000321265 KRTAP19-8Q3LI54 63 aa7.79□□□□□ -1.16
NUDC-201ENST00000321265 MT1BP07438 61 aa7.75□□□□□ -1.17
NUDC-201ENST00000321265 SSPOA2VEC9 5147 aa7.73□□□□□ -1.17
NUDC-201ENST00000321265 KTN1-AS1Q86SY8 53 aa7.68□□□□□ -1.18
NUDC-201ENST00000321265 CRCT1Q9UGL9 99 aa7.68□□□□□ -1.18
NUDC-201ENST00000321265 PLAC4Q8WY50 150 aa7.63□□□□□ -1.19
NUDC-201ENST00000321265 KRTAP9-6A0A140TA67 174 aa7.61□□□□□ -1.19
NUDC-201ENST00000321265 ROMO1P60602 79 aa7.6□□□□□ -1.19
NUDC-201ENST00000321265 PRAC1Q96KF2 57 aa7.52□□□□□ -1.21
NUDC-201ENST00000321265 CAMK2N1Q7Z7J9 78 aa7.51□□□□□ -1.21
NUDC-201ENST00000321265 KRTAP19-6Q3LI70 58 aa7.48□□□□□ -1.21
NUDC-201ENST00000321265 C10orf95Q9H7T3 257 aa7.45□□□□□ -1.22
NUDC-201ENST00000321265 FCGBPQ9Y6R7 5405 aaPredicted RBP7.44□□□□□ -1.22
NUDC-201ENST00000321265 MT1XP80297 61 aa7.43□□□□□ -1.22
NUDC-201ENST00000321265 H3BS24 57 aa7.41□□□□□ -1.22
NUDC-201ENST00000321265 KRTAP10-5P60370 271 aa7.41□□□□□ -1.22
NUDC-201ENST00000321265 PRO2289Q9P1D8 64 aa7.34□□□□□ -1.24
NUDC-201ENST00000321265 KRTAP25-1Q3LHN0 102 aa7.31□□□□□ -1.24
NUDC-201ENST00000321265 MACF1Q9UPN3 7388 aaKnown RBP7.25□□□□□ -1.25
NUDC-201ENST00000321265 TNP1P09430 55 aa7.17□□□□□ -1.26
NUDC-201ENST00000321265 SYNE2Q8WXH0 6885 aaKnown RBP7.15□□□□□ -1.26
NUDC-201ENST00000321265 KRTAP10-7P60409 375 aaPredicted RBP7.15□□□□□ -1.27
NUDC-201ENST00000321265 KRTAP9-1A8MXZ3 250 aaPredicted RBP7.14□□□□□ -1.27
NUDC-201ENST00000321265 KMT2DO14686 5537 aa7.11□□□□□ -1.27
NUDC-201ENST00000321265 KRTAP23-1A1A580 65 aa7.05□□□□□ -1.28
NUDC-201ENST00000321265 PP632Q6XCG6 107 aa7.04□□□□□ -1.28
NUDC-201ENST00000321265 KRTAP10-12P60413 245 aa7.03□□□□□ -1.28
NUDC-201ENST00000321265 KRTAP4-8A0A0G2JLE6 195 aa6.97□□□□□ -1.29
NUDC-201ENST00000321265 KRTAP4-8Q9BYQ9 185 aa6.97□□□□□ -1.29
NUDC-201ENST00000321265 KRTAP9-7A8MTY7 169 aa6.9□□□□□ -1.3
NUDC-201ENST00000321265 LCE3AQ5TA76 89 aa6.87□□□□□ -1.31
NUDC-201ENST00000321265 KRTAP8-1Q8IUC2 63 aa6.8□□□□□ -1.32
NUDC-201ENST00000321265 KRTAP6-3Q3LI67 103 aa6.78□□□□□ -1.32
NUDC-201ENST00000321265 A0A0A0MQY5 61 aa6.73□□□□□ -1.33
NUDC-201ENST00000321265 MUC12Q9UKN1 5478 aa6.73□□□□□ -1.33
NUDC-201ENST00000321265 SPRR2FQ96RM1 72 aa6.68□□□□□ -1.34
NUDC-201ENST00000321265 KRTAP5-9P26371 169 aa6.67□□□□□ -1.34
NUDC-201ENST00000321265 KRTAP19-5Q3LI72 72 aa6.66□□□□□ -1.34
NUDC-201ENST00000321265 KRTAP19-7Q3SYF9 63 aa6.64□□□□□ -1.35
NUDC-201ENST00000321265 KRTAP12-3P60328 96 aa6.59□□□□□ -1.35
NUDC-201ENST00000321265 MDN1Q9NU22 5596 aa6.57□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms