RNA–Protein interactions for RNA: ENST00000320578.2

RAB39A-201, Transcript of RAB39A, member RAS oncogene family, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAB39A, Length 1,830 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB39A-201ENST00000320578 A0A1B0GU69 56 aa8.94□□□□□ -0.98
RAB39A-201ENST00000320578 S4R3F8 94 aa8.94□□□□□ -0.98
RAB39A-201ENST00000320578 KRTAP4-1Q9BYQ7 146 aa8.91□□□□□ -0.98
RAB39A-201ENST00000320578 HMCN2Q8NDA2 5059 aa8.91□□□□□ -0.98
RAB39A-201ENST00000320578 KRTAP3-3Q9BYR6 98 aa8.91□□□□□ -0.98
RAB39A-201ENST00000320578 LCA10Q71F78 164 aa8.9□□□□□ -0.98
RAB39A-201ENST00000320578 HERC1Q15751 4861 aa8.9□□□□□ -0.99
RAB39A-201ENST00000320578 SEC61GP60059 68 aa8.87□□□□□ -0.99
RAB39A-201ENST00000320578 A6NED7 52 aa8.8□□□□□ -1
RAB39A-201ENST00000320578 BRK1Q8WUW1 75 aa8.78□□□□□ -1
RAB39A-201ENST00000320578 KRTAP19-2Q3LHN2 52 aa8.77□□□□□ -1.01
RAB39A-201ENST00000320578 CSAG1Q6PB30 78 aa8.75□□□□□ -1.01
RAB39A-201ENST00000320578 PRO0628Q9UI54 55 aa8.73□□□□□ -1.01
RAB39A-201ENST00000320578 UQCR11O14957 56 aa8.73□□□□□ -1.01
RAB39A-201ENST00000320578 CDC42SE1Q9NRR8 79 aa8.72□□□□□ -1.01
RAB39A-201ENST00000320578 SPATA8Q6RVD6 105 aa8.66□□□□□ -1.02
RAB39A-201ENST00000320578 A0A1B0GU33 70 aa8.64□□□□□ -1.03
RAB39A-201ENST00000320578 H0YAA0 97 aa8.64□□□□□ -1.03
RAB39A-201ENST00000320578 KRTAP10-6P60371 365 aaPredicted RBP8.64□□□□□ -1.03
RAB39A-201ENST00000320578 KRTAP3-2Q9BYR7 98 aa8.64□□□□□ -1.03
RAB39A-201ENST00000320578 MIR22HGQ0VDD5 57 aa8.61□□□□□ -1.03
RAB39A-201ENST00000320578 A8MU10 97 aa8.57□□□□□ -1.04
RAB39A-201ENST00000320578 ADM2Q7Z4H4 148 aa8.54□□□□□ -1.04
RAB39A-201ENST00000320578 FLGP20930 4061 aaPredicted RBP8.52□□□□□ -1.05
RAB39A-201ENST00000320578 P0C880 135 aa8.5□□□□□ -1.05
RAB39A-201ENST00000320578 MUC2Q02817 5179 aa8.48□□□□□ -1.05
RAB39A-201ENST00000320578 LCE2CQ5TA81 110 aa8.48□□□□□ -1.05
RAB39A-201ENST00000320578 RNF213Q63HN8 5207 aa8.41□□□□□ -1.06
RAB39A-201ENST00000320578 M0QZ58 72 aa8.39□□□□□ -1.07
RAB39A-201ENST00000320578 UBR4Q5T4S7 5183 aa8.38□□□□□ -1.07
RAB39A-201ENST00000320578 KRTAP13-4Q3LI77 160 aa8.37□□□□□ -1.07
RAB39A-201ENST00000320578 PMAIP1Q13794 54 aa8.33□□□□□ -1.08
RAB39A-201ENST00000320578 SVIPQ8NHG7 77 aa8.33□□□□□ -1.08
RAB39A-201ENST00000320578 A6NN06 94 aa8.3□□□□□ -1.08
RAB39A-201ENST00000320578 MT1HP80294 61 aa8.29□□□□□ -1.08
RAB39A-201ENST00000320578 R4GN34 69 aa8.24□□□□□ -1.09
RAB39A-201ENST00000320578 K7ERS5 55 aa8.23□□□□□ -1.09
RAB39A-201ENST00000320578 CRIPTQ9P021 101 aa8.22□□□□□ -1.09
RAB39A-201ENST00000320578 A0A0D9SG42 100 aa8.19□□□□□ -1.1
RAB39A-201ENST00000320578 M0R2T5 61 aa8.18□□□□□ -1.1
RAB39A-201ENST00000320578 LORP23490 312 aaPredicted RBP8.18□□□□□ -1.1
RAB39A-201ENST00000320578 FAT4Q6V0I7 4981 aa8.17□□□□□ -1.1
RAB39A-201ENST00000320578 KRTAP12-1P59990 96 aa8.1□□□□□ -1.11
RAB39A-201ENST00000320578 KRTAP12-2P59991 146 aa8.06□□□□□ -1.12
RAB39A-201ENST00000320578 KTN1-AS1Q86SY8 53 aa8.06□□□□□ -1.12
RAB39A-201ENST00000320578 KRTAP9-8Q9BYQ0 159 aa8.02□□□□□ -1.13
RAB39A-201ENST00000320578 LINC01554Q52M75 96 aa8.01□□□□□ -1.13
RAB39A-201ENST00000320578 SPINT4Q6UDR6 99 aa8.01□□□□□ -1.13
RAB39A-201ENST00000320578 MT2AP02795 61 aa8□□□□□ -1.13
RAB39A-201ENST00000320578 SPRR2GQ9BYE4 73 aa7.96□□□□□ -1.13
RAB39A-201ENST00000320578 MT1FP04733 61 aa7.94□□□□□ -1.14
RAB39A-201ENST00000320578 KRTAP10-10P60014 251 aa7.92□□□□□ -1.14
RAB39A-201ENST00000320578 ROMO1P60602 79 aa7.9□□□□□ -1.14
RAB39A-201ENST00000320578 LCE2AQ5TA79 106 aaPredicted RBP7.89□□□□□ -1.15
RAB39A-201ENST00000320578 KRTAP19-1Q8IUB9 90 aa7.89□□□□□ -1.15
RAB39A-201ENST00000320578 KRTAP19-8Q3LI54 63 aa7.74□□□□□ -1.17
RAB39A-201ENST00000320578 PRAC1Q96KF2 57 aa7.74□□□□□ -1.17
RAB39A-201ENST00000320578 KRTAP9-3Q9BYQ3 159 aa7.74□□□□□ -1.17
RAB39A-201ENST00000320578 CAMK2N1Q7Z7J9 78 aa7.71□□□□□ -1.17
RAB39A-201ENST00000320578 PLAC4Q8WY50 150 aa7.7□□□□□ -1.18
RAB39A-201ENST00000320578 C10orf95Q9H7T3 257 aa7.64□□□□□ -1.19
RAB39A-201ENST00000320578 KRTAP25-1Q3LHN0 102 aa7.62□□□□□ -1.19
RAB39A-201ENST00000320578 MT1BP07438 61 aa7.57□□□□□ -1.2
RAB39A-201ENST00000320578 LCE2BO14633 110 aa7.45□□□□□ -1.22
RAB39A-201ENST00000320578 TNP1P09430 55 aa7.41□□□□□ -1.22
RAB39A-201ENST00000320578 MT1XP80297 61 aa7.36□□□□□ -1.23
RAB39A-201ENST00000320578 KRTAP10-5P60370 271 aa7.35□□□□□ -1.23
RAB39A-201ENST00000320578 KRTAP23-1A1A580 65 aa7.34□□□□□ -1.24
RAB39A-201ENST00000320578 PP632Q6XCG6 107 aa7.33□□□□□ -1.24
RAB39A-201ENST00000320578 PRO2289Q9P1D8 64 aa7.3□□□□□ -1.24
RAB39A-201ENST00000320578 USH2AO75445 5202 aa7.16□□□□□ -1.26
RAB39A-201ENST00000320578 LCE2DQ5TA82 110 aaPredicted RBP7.15□□□□□ -1.26
RAB39A-201ENST00000320578 KRTAP10-7P60409 375 aaPredicted RBP7.04□□□□□ -1.28
RAB39A-201ENST00000320578 KRTAP10-12P60413 245 aa7.03□□□□□ -1.28
RAB39A-201ENST00000320578 KRTAP19-6Q3LI70 58 aa7.03□□□□□ -1.28
RAB39A-201ENST00000320578 LCE3AQ5TA76 89 aa7.02□□□□□ -1.29
RAB39A-201ENST00000320578 KRTAP8-1Q8IUC2 63 aa6.97□□□□□ -1.29
RAB39A-201ENST00000320578 SSPOA2VEC9 5147 aa6.93□□□□□ -1.3
RAB39A-201ENST00000320578 KRTAP12-3P60328 96 aa6.77□□□□□ -1.33
RAB39A-201ENST00000320578 KRTAP15-1Q3LI76 137 aa6.77□□□□□ -1.33
RAB39A-201ENST00000320578 KRTAP4-8A0A0G2JLE6 195 aa6.7□□□□□ -1.34
RAB39A-201ENST00000320578 KRTAP9-2Q9BYQ4 174 aa6.7□□□□□ -1.34
RAB39A-201ENST00000320578 KRTAP4-8Q9BYQ9 185 aa6.7□□□□□ -1.34
RAB39A-201ENST00000320578 KRTAP19-5Q3LI72 72 aa6.66□□□□□ -1.34
RAB39A-201ENST00000320578 FSIP2Q5CZC0 6907 aa6.64□□□□□ -1.35
RAB39A-201ENST00000320578 FCGBPQ9Y6R7 5405 aaPredicted RBP6.59□□□□□ -1.35
RAB39A-201ENST00000320578 KRTAP19-7Q3SYF9 63 aa6.57□□□□□ -1.36
RAB39A-201ENST00000320578 SPRR5A0A1B0GTR4 108 aa6.55□□□□□ -1.36
RAB39A-201ENST00000320578 KMT2DO14686 5537 aa6.53□□□□□ -1.36
RAB39A-201ENST00000320578 CRCT1Q9UGL9 99 aa6.51□□□□□ -1.37
RAB39A-201ENST00000320578 KRTAP19-4Q3LI73 84 aa6.49□□□□□ -1.37
RAB39A-201ENST00000320578 LOC100996750A0A140TA64 210 aa6.45□□□□□ -1.38
RAB39A-201ENST00000320578 MT1EP04732 61 aa6.45□□□□□ -1.38
RAB39A-201ENST00000320578 KRTAP4-6Q9BYQ5 205 aa6.45□□□□□ -1.38
RAB39A-201ENST00000320578 LUZP6Q538Z0 58 aa6.34□□□□□ -1.39
RAB39A-201ENST00000320578 LCE3CQ5T5A8 94 aa6.34□□□□□ -1.39
RAB39A-201ENST00000320578 MT1LQ93083 61 aa6.34□□□□□ -1.4
RAB39A-201ENST00000320578 NDUFAF8A1L188 74 aa6.24□□□□□ -1.41
RAB39A-201ENST00000320578 KRTAP19-3Q7Z4W3 81 aa6.18□□□□□ -1.42
RAB39A-201ENST00000320578 SPRR2FQ96RM1 72 aa6.18□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 77.6 ms