RNA–Protein interactions for RNA: ENST00000320054.4

PRPF18-201, Transcript of pre-mRNA processing factor 18, humanhuman

TSL 5

Gene PRPF18, Length 788 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF18-201ENST00000320054 MT1HP80294 61 aa6.68□□□□□ -1.34
PRPF18-201ENST00000320054 S4R3F8 94 aa6.65□□□□□ -1.34
PRPF18-201ENST00000320054 TMEM258P61165 79 aa6.64□□□□□ -1.35
PRPF18-201ENST00000320054 ATP5EP56381 51 aaPredicted RBP6.63□□□□□ -1.35
PRPF18-201ENST00000320054 LCE2AQ5TA79 106 aaPredicted RBP6.63□□□□□ -1.35
PRPF18-201ENST00000320054 LCA10Q71F78 164 aa6.61□□□□□ -1.35
PRPF18-201ENST00000320054 M0R2T5 61 aa6.58□□□□□ -1.36
PRPF18-201ENST00000320054 CSAG1Q6PB30 78 aa6.55□□□□□ -1.36
PRPF18-201ENST00000320054 COA5Q86WW8 74 aa6.54□□□□□ -1.36
PRPF18-201ENST00000320054 CHKB-CPT1BH3BT56 60 aa6.53□□□□□ -1.36
PRPF18-201ENST00000320054 SPTSSBQ8NFR3 76 aa6.51□□□□□ -1.37
PRPF18-201ENST00000320054 KRTAP10-6P60371 365 aaPredicted RBP6.48□□□□□ -1.37
PRPF18-201ENST00000320054 LORP23490 312 aaPredicted RBP6.46□□□□□ -1.38
PRPF18-201ENST00000320054 SERP1Q9Y6X1 66 aa6.43□□□□□ -1.38
PRPF18-201ENST00000320054 KRTAP9-8Q9BYQ0 159 aa6.41□□□□□ -1.38
PRPF18-201ENST00000320054 H0YAA0 97 aa6.4□□□□□ -1.38
PRPF18-201ENST00000320054 MT2AP02795 61 aa6.37□□□□□ -1.39
PRPF18-201ENST00000320054 RPS28P62857 69 aaKnown RBP6.32□□□□□ -1.4
PRPF18-201ENST00000320054 MT1FP04733 61 aa6.31□□□□□ -1.4
PRPF18-201ENST00000320054 ADM2Q7Z4H4 148 aa6.31□□□□□ -1.4
PRPF18-201ENST00000320054 KRTAP10-10P60014 251 aa6.29□□□□□ -1.4
PRPF18-201ENST00000320054 P0C880 135 aa6.24□□□□□ -1.41
PRPF18-201ENST00000320054 SEC61GP60059 68 aa6.24□□□□□ -1.41
PRPF18-201ENST00000320054 SMIM26A0A096LP01 95 aa6.23□□□□□ -1.41
PRPF18-201ENST00000320054 CRIPTQ9P021 101 aa6.23□□□□□ -1.41
PRPF18-201ENST00000320054 LINC01558Q9Y6Z2 57 aa6.23□□□□□ -1.41
PRPF18-201ENST00000320054 A0A1B0GU69 56 aa6.2□□□□□ -1.42
PRPF18-201ENST00000320054 KRTAP9-3Q9BYQ3 159 aa6.19□□□□□ -1.42
PRPF18-201ENST00000320054 V9GYY9 64 aa6.19□□□□□ -1.42
PRPF18-201ENST00000320054 Q1T7F1 81 aa6.17□□□□□ -1.42
PRPF18-201ENST00000320054 PRR15LQ9BU68 103 aa6.17□□□□□ -1.42
PRPF18-201ENST00000320054 SPRR2GQ9BYE4 73 aa6.14□□□□□ -1.43
PRPF18-201ENST00000320054 KRTAP19-1Q8IUB9 90 aa6.12□□□□□ -1.43
PRPF18-201ENST00000320054 R4GN34 69 aa6.12□□□□□ -1.43
PRPF18-201ENST00000320054 M0QZ58 72 aa6.1□□□□□ -1.43
PRPF18-201ENST00000320054 A0A1B0GU33 70 aa6.09□□□□□ -1.43
PRPF18-201ENST00000320054 LCE2BO14633 110 aa6.05□□□□□ -1.44
PRPF18-201ENST00000320054 Q5VV11 94 aa6.03□□□□□ -1.44
PRPF18-201ENST00000320054 PSPHP1O15172 72 aa6.02□□□□□ -1.45
PRPF18-201ENST00000320054 KRTAP19-8Q3LI54 63 aa6.02□□□□□ -1.45
PRPF18-201ENST00000320054 KRTAP13-4Q3LI77 160 aa6.02□□□□□ -1.45
PRPF18-201ENST00000320054 KRTAP9-2Q9BYQ4 174 aa5.98□□□□□ -1.45
PRPF18-201ENST00000320054 UQCR11O14957 56 aa5.97□□□□□ -1.45
PRPF18-201ENST00000320054 SPATA8Q6RVD6 105 aa5.97□□□□□ -1.45
PRPF18-201ENST00000320054 LINC01554Q52M75 96 aa5.95□□□□□ -1.46
PRPF18-201ENST00000320054 A6NN06 94 aa5.93□□□□□ -1.46
PRPF18-201ENST00000320054 MT1BP07438 61 aa5.93□□□□□ -1.46
PRPF18-201ENST00000320054 USH2AO75445 5202 aa5.89□□□□□ -1.47
PRPF18-201ENST00000320054 MIR22HGQ0VDD5 57 aa5.88□□□□□ -1.47
PRPF18-201ENST00000320054 A0A0D9SG42 100 aa5.87□□□□□ -1.47
PRPF18-201ENST00000320054 A6NED7 52 aa5.86□□□□□ -1.47
PRPF18-201ENST00000320054 PLAC4Q8WY50 150 aa5.86□□□□□ -1.47
PRPF18-201ENST00000320054 A8MU10 97 aa5.85□□□□□ -1.47
PRPF18-201ENST00000320054 LOC100996750A0A140TA64 210 aa5.83□□□□□ -1.48
PRPF18-201ENST00000320054 KRTAP4-6Q9BYQ5 205 aa5.83□□□□□ -1.48
PRPF18-201ENST00000320054 KRTAP12-1P59990 96 aa5.8□□□□□ -1.48
PRPF18-201ENST00000320054 KRTAP19-6Q3LI70 58 aa5.77□□□□□ -1.49
PRPF18-201ENST00000320054 SPINT4Q6UDR6 99 aa5.77□□□□□ -1.49
PRPF18-201ENST00000320054 FSIP2Q5CZC0 6907 aa5.76□□□□□ -1.49
PRPF18-201ENST00000320054 KRTAP12-2P59991 146 aa5.75□□□□□ -1.49
PRPF18-201ENST00000320054 SSPOA2VEC9 5147 aa5.75□□□□□ -1.49
PRPF18-201ENST00000320054 CDC42SE1Q9NRR8 79 aa5.74□□□□□ -1.49
PRPF18-201ENST00000320054 CRCT1Q9UGL9 99 aa5.74□□□□□ -1.49
PRPF18-201ENST00000320054 KRTAP10-5P60370 271 aa5.7□□□□□ -1.5
PRPF18-201ENST00000320054 CAMK2N1Q7Z7J9 78 aa5.69□□□□□ -1.5
PRPF18-201ENST00000320054 MT1XP80297 61 aa5.68□□□□□ -1.5
PRPF18-201ENST00000320054 PRO2289Q9P1D8 64 aa5.68□□□□□ -1.5
PRPF18-201ENST00000320054 K7ERS5 55 aa5.67□□□□□ -1.5
PRPF18-201ENST00000320054 KRTAP9-6A0A140TA67 174 aa5.62□□□□□ -1.51
PRPF18-201ENST00000320054 BRK1Q8WUW1 75 aa5.59□□□□□ -1.51
PRPF18-201ENST00000320054 FCGBPQ9Y6R7 5405 aaPredicted RBP5.54□□□□□ -1.52
PRPF18-201ENST00000320054 C10orf95Q9H7T3 257 aa5.5□□□□□ -1.53
PRPF18-201ENST00000320054 KRTAP10-7P60409 375 aaPredicted RBP5.42□□□□□ -1.54
PRPF18-201ENST00000320054 KRTAP10-12P60413 245 aa5.41□□□□□ -1.54
PRPF18-201ENST00000320054 TNP1P09430 55 aa5.39□□□□□ -1.55
PRPF18-201ENST00000320054 ROMO1P60602 79 aa5.38□□□□□ -1.55
PRPF18-201ENST00000320054 PRO0628Q9UI54 55 aa5.37□□□□□ -1.55
PRPF18-201ENST00000320054 KRTAP25-1Q3LHN0 102 aa5.35□□□□□ -1.55
PRPF18-201ENST00000320054 KRTAP9-1A8MXZ3 250 aaPredicted RBP5.33□□□□□ -1.56
PRPF18-201ENST00000320054 MACF1Q9UPN3 7388 aaKnown RBP5.32□□□□□ -1.56
PRPF18-201ENST00000320054 SVIPQ8NHG7 77 aa5.31□□□□□ -1.56
PRPF18-201ENST00000320054 PMAIP1Q13794 54 aa5.29□□□□□ -1.56
PRPF18-201ENST00000320054 KRTAP4-8A0A0G2JLE6 195 aa5.26□□□□□ -1.57
PRPF18-201ENST00000320054 KRTAP4-8Q9BYQ9 185 aa5.26□□□□□ -1.57
PRPF18-201ENST00000320054 KRTAP8-1Q8IUC2 63 aa5.21□□□□□ -1.58
PRPF18-201ENST00000320054 KRTAP23-1A1A580 65 aa5.2□□□□□ -1.58
PRPF18-201ENST00000320054 LCE3AQ5TA76 89 aa5.19□□□□□ -1.58
PRPF18-201ENST00000320054 KRTAP6-3Q3LI67 103 aa5.16□□□□□ -1.58
PRPF18-201ENST00000320054 KMT2DO14686 5537 aa5.16□□□□□ -1.58
PRPF18-201ENST00000320054 SYNE2Q8WXH0 6885 aaKnown RBP5.14□□□□□ -1.59
PRPF18-201ENST00000320054 KRTAP5-9P26371 169 aa5.13□□□□□ -1.59
PRPF18-201ENST00000320054 PP632Q6XCG6 107 aa5.12□□□□□ -1.59
PRPF18-201ENST00000320054 KRTAP9-7A8MTY7 169 aa5.11□□□□□ -1.59
PRPF18-201ENST00000320054 KRTAP19-7Q3SYF9 63 aa5.07□□□□□ -1.6
PRPF18-201ENST00000320054 KRTAP19-5Q3LI72 72 aa5.06□□□□□ -1.6
PRPF18-201ENST00000320054 SPRR2FQ96RM1 72 aa5.06□□□□□ -1.6
PRPF18-201ENST00000320054 MT1EP04732 61 aa5□□□□□ -1.61
PRPF18-201ENST00000320054 KRTAP12-3P60328 96 aa5□□□□□ -1.61
PRPF18-201ENST00000320054 KTN1-AS1Q86SY8 53 aa5□□□□□ -1.61
PRPF18-201ENST00000320054 PRAC1Q96KF2 57 aa4.95□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 102.5 ms