RNA–Protein interactions for RNA: ENST00000319792.7

NECTIN3-201, Transcript of nectin cell adhesion molecule 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NECTIN3, Length 1,549 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECTIN3-201ENST00000319792 S4R3F8 94 aa15.5■□□□□ 0.07
NECTIN3-201ENST00000319792 LCA10Q71F78 164 aa15.45■□□□□ 0.06
NECTIN3-201ENST00000319792 SPTSSBQ8NFR3 76 aa15.42■□□□□ 0.06
NECTIN3-201ENST00000319792 KRTAP3-3Q9BYR6 98 aa15.42■□□□□ 0.06
NECTIN3-201ENST00000319792 LCE2CQ5TA81 110 aa15.31■□□□□ 0.04
NECTIN3-201ENST00000319792 Q1T7F1 81 aa15.27■□□□□ 0.03
NECTIN3-201ENST00000319792 FLGP20930 4061 aaPredicted RBP15.24■□□□□ 0.03
NECTIN3-201ENST00000319792 V9GYY9 64 aa15.22■□□□□ 0.03
NECTIN3-201ENST00000319792 LINC01558Q9Y6Z2 57 aa15.21■□□□□ 0.03
NECTIN3-201ENST00000319792 CSAG1Q6PB30 78 aa15.17■□□□□ 0.02
NECTIN3-201ENST00000319792 PRR15LQ9BU68 103 aa14.99□□□□□ -0.01
NECTIN3-201ENST00000319792 MT1HP80294 61 aa14.98□□□□□ -0.01
NECTIN3-201ENST00000319792 FAT4Q6V0I7 4981 aa14.98□□□□□ -0.01
NECTIN3-201ENST00000319792 A0A1B0GU69 56 aa14.97□□□□□ -0.01
NECTIN3-201ENST00000319792 PSPHP1O15172 72 aa14.94□□□□□ -0.02
NECTIN3-201ENST00000319792 SEC61GP60059 68 aa14.92□□□□□ -0.02
NECTIN3-201ENST00000319792 H0YAA0 97 aa14.89□□□□□ -0.03
NECTIN3-201ENST00000319792 Q5VV11 94 aa14.86□□□□□ -0.03
NECTIN3-201ENST00000319792 KRTAP3-2Q9BYR7 98 aa14.84□□□□□ -0.03
NECTIN3-201ENST00000319792 KRTAP10-6P60371 365 aaPredicted RBP14.79□□□□□ -0.04
NECTIN3-201ENST00000319792 ADM2Q7Z4H4 148 aa14.78□□□□□ -0.04
NECTIN3-201ENST00000319792 M0R2T5 61 aa14.76□□□□□ -0.05
NECTIN3-201ENST00000319792 P0C880 135 aa14.68□□□□□ -0.06
NECTIN3-201ENST00000319792 A0A1B0GU33 70 aa14.59□□□□□ -0.07
NECTIN3-201ENST00000319792 LCE2AQ5TA79 106 aaPredicted RBP14.54□□□□□ -0.08
NECTIN3-201ENST00000319792 UQCR11O14957 56 aa14.51□□□□□ -0.09
NECTIN3-201ENST00000319792 A6NED7 52 aa14.49□□□□□ -0.09
NECTIN3-201ENST00000319792 KRTAP9-8Q9BYQ0 159 aa14.42□□□□□ -0.1
NECTIN3-201ENST00000319792 LORP23490 312 aaPredicted RBP14.39□□□□□ -0.11
NECTIN3-201ENST00000319792 MT2AP02795 61 aa14.37□□□□□ -0.11
NECTIN3-201ENST00000319792 KRTAP13-4Q3LI77 160 aa14.35□□□□□ -0.11
NECTIN3-201ENST00000319792 M0QZ58 72 aa14.33□□□□□ -0.12
NECTIN3-201ENST00000319792 MIR22HGQ0VDD5 57 aa14.33□□□□□ -0.12
NECTIN3-201ENST00000319792 SPATA8Q6RVD6 105 aa14.32□□□□□ -0.12
NECTIN3-201ENST00000319792 CRIPTQ9P021 101 aa14.29□□□□□ -0.12
NECTIN3-201ENST00000319792 MT1FP04733 61 aa14.27□□□□□ -0.12
NECTIN3-201ENST00000319792 CDC42SE1Q9NRR8 79 aa14.26□□□□□ -0.13
NECTIN3-201ENST00000319792 R4GN34 69 aa14.25□□□□□ -0.13
NECTIN3-201ENST00000319792 KRTAP10-10P60014 251 aa14.2□□□□□ -0.14
NECTIN3-201ENST00000319792 BRK1Q8WUW1 75 aa14.2□□□□□ -0.14
NECTIN3-201ENST00000319792 A8MU10 97 aa14.13□□□□□ -0.15
NECTIN3-201ENST00000319792 SPRR2GQ9BYE4 73 aa14.03□□□□□ -0.16
NECTIN3-201ENST00000319792 A0A0D9SG42 100 aa14□□□□□ -0.17
NECTIN3-201ENST00000319792 KRTAP19-1Q8IUB9 90 aa13.99□□□□□ -0.17
NECTIN3-201ENST00000319792 LINC01554Q52M75 96 aa13.94□□□□□ -0.18
NECTIN3-201ENST00000319792 KRTAP9-3Q9BYQ3 159 aa13.92□□□□□ -0.18
NECTIN3-201ENST00000319792 PRO0628Q9UI54 55 aa13.85□□□□□ -0.19
NECTIN3-201ENST00000319792 A6NN06 94 aa13.82□□□□□ -0.2
NECTIN3-201ENST00000319792 KRTAP12-1P59990 96 aa13.8□□□□□ -0.2
NECTIN3-201ENST00000319792 KRTAP12-2P59991 146 aa13.74□□□□□ -0.21
NECTIN3-201ENST00000319792 K7ERS5 55 aa13.69□□□□□ -0.22
NECTIN3-201ENST00000319792 KRTAP19-8Q3LI54 63 aa13.69□□□□□ -0.22
NECTIN3-201ENST00000319792 SPINT4Q6UDR6 99 aa13.69□□□□□ -0.22
NECTIN3-201ENST00000319792 LCE2BO14633 110 aa13.54□□□□□ -0.24
NECTIN3-201ENST00000319792 MT1BP07438 61 aa13.49□□□□□ -0.25
NECTIN3-201ENST00000319792 PLAC4Q8WY50 150 aa13.47□□□□□ -0.25
NECTIN3-201ENST00000319792 PMAIP1Q13794 54 aa13.43□□□□□ -0.26
NECTIN3-201ENST00000319792 CAMK2N1Q7Z7J9 78 aa13.32□□□□□ -0.28
NECTIN3-201ENST00000319792 KRTAP9-2Q9BYQ4 174 aa13.29□□□□□ -0.28
NECTIN3-201ENST00000319792 LCE2DQ5TA82 110 aaPredicted RBP13.28□□□□□ -0.28
NECTIN3-201ENST00000319792 USH2AO75445 5202 aa13.17□□□□□ -0.3
NECTIN3-201ENST00000319792 ROMO1P60602 79 aa13.13□□□□□ -0.31
NECTIN3-201ENST00000319792 C10orf95Q9H7T3 257 aa13.08□□□□□ -0.32
NECTIN3-201ENST00000319792 MT1XP80297 61 aa13.02□□□□□ -0.33
NECTIN3-201ENST00000319792 KRTAP10-5P60370 271 aa12.99□□□□□ -0.33
NECTIN3-201ENST00000319792 SVIPQ8NHG7 77 aa12.97□□□□□ -0.33
NECTIN3-201ENST00000319792 PRO2289Q9P1D8 64 aa12.88□□□□□ -0.35
NECTIN3-201ENST00000319792 KRTAP9-6A0A140TA67 174 aa12.86□□□□□ -0.35
NECTIN3-201ENST00000319792 KTN1-AS1Q86SY8 53 aa12.85□□□□□ -0.35
NECTIN3-201ENST00000319792 KRTAP19-6Q3LI70 58 aa12.78□□□□□ -0.36
NECTIN3-201ENST00000319792 SSPOA2VEC9 5147 aa12.75□□□□□ -0.37
NECTIN3-201ENST00000319792 KRTAP25-1Q3LHN0 102 aa12.72□□□□□ -0.37
NECTIN3-201ENST00000319792 TNP1P09430 55 aa12.68□□□□□ -0.38
NECTIN3-201ENST00000319792 PRAC1Q96KF2 57 aa12.6□□□□□ -0.39
NECTIN3-201ENST00000319792 FSIP2Q5CZC0 6907 aa12.56□□□□□ -0.4
NECTIN3-201ENST00000319792 CRCT1Q9UGL9 99 aa12.56□□□□□ -0.4
NECTIN3-201ENST00000319792 KRTAP10-7P60409 375 aaPredicted RBP12.46□□□□□ -0.42
NECTIN3-201ENST00000319792 KRTAP10-12P60413 245 aa12.37□□□□□ -0.43
NECTIN3-201ENST00000319792 KRTAP23-1A1A580 65 aa12.32□□□□□ -0.44
NECTIN3-201ENST00000319792 PP632Q6XCG6 107 aa12.26□□□□□ -0.45
NECTIN3-201ENST00000319792 FCGBPQ9Y6R7 5405 aaPredicted RBP12.25□□□□□ -0.45
NECTIN3-201ENST00000319792 LCE3AQ5TA76 89 aa12.17□□□□□ -0.46
NECTIN3-201ENST00000319792 KRTAP4-8A0A0G2JLE6 195 aa11.98□□□□□ -0.49
NECTIN3-201ENST00000319792 KRTAP4-8Q9BYQ9 185 aa11.98□□□□□ -0.49
NECTIN3-201ENST00000319792 KRTAP8-1Q8IUC2 63 aa11.97□□□□□ -0.49
NECTIN3-201ENST00000319792 KMT2DO14686 5537 aa11.86□□□□□ -0.51
NECTIN3-201ENST00000319792 KRTAP12-3P60328 96 aa11.7□□□□□ -0.54
NECTIN3-201ENST00000319792 KRTAP19-5Q3LI72 72 aa11.7□□□□□ -0.54
NECTIN3-201ENST00000319792 KRTAP9-1A8MXZ3 250 aaPredicted RBP11.68□□□□□ -0.54
NECTIN3-201ENST00000319792 KRTAP19-7Q3SYF9 63 aa11.63□□□□□ -0.55
NECTIN3-201ENST00000319792 KRTAP9-7A8MTY7 169 aa11.56□□□□□ -0.56
NECTIN3-201ENST00000319792 MACF1Q9UPN3 7388 aaKnown RBP11.56□□□□□ -0.56
NECTIN3-201ENST00000319792 KRTAP15-1Q3LI76 137 aa11.44□□□□□ -0.58
NECTIN3-201ENST00000319792 MT1EP04732 61 aa11.43□□□□□ -0.58
NECTIN3-201ENST00000319792 KRTAP5-9P26371 169 aa11.28□□□□□ -0.6
NECTIN3-201ENST00000319792 SPRR2FQ96RM1 72 aa11.28□□□□□ -0.6
NECTIN3-201ENST00000319792 SYNE2Q8WXH0 6885 aaKnown RBP11.2□□□□□ -0.62
NECTIN3-201ENST00000319792 MT1LQ93083 61 aa11.18□□□□□ -0.62
NECTIN3-201ENST00000319792 KRTAP6-3Q3LI67 103 aa11.14□□□□□ -0.63
NECTIN3-201ENST00000319792 KRTAP19-4Q3LI73 84 aa11.06□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms