RNA–Protein interactions for RNA: ENST00000319533.9

RPP40-201, Transcript of ribonuclease P/MRP subunit p40, humanhuman

TSL 1 (best) BASIC

Gene RPP40, Length 1,088 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPP40-201ENST00000319533 KRTAP4-11Q9BYQ6 195 aa6.94□□□□□ -1.3
RPP40-201ENST00000319533 KRTAP4-2Q9BYR5 136 aa6.92□□□□□ -1.3
RPP40-201ENST00000319533 NDUFS5O43920 106 aa6.91□□□□□ -1.3
RPP40-201ENST00000319533 KRTAP23-1A1A580 65 aa6.87□□□□□ -1.31
RPP40-201ENST00000319533 SCGB1A1P11684 91 aa6.86□□□□□ -1.31
RPP40-201ENST00000319533 OCR1Q9BZK8 76 aa6.85□□□□□ -1.31
RPP40-201ENST00000319533 ATOX1O00244 68 aa6.83□□□□□ -1.32
RPP40-201ENST00000319533 Q5W150 140 aa6.8□□□□□ -1.32
RPP40-201ENST00000319533 KRTAP6-3Q3LI67 103 aa6.78□□□□□ -1.32
RPP40-201ENST00000319533 IGKV2D-30A0A075B6S6 120 aa6.77□□□□□ -1.33
RPP40-201ENST00000319533 TRAV7A0A075B6U4 112 aa6.77□□□□□ -1.33
RPP40-201ENST00000319533 IGKV2-30P06310 120 aa6.77□□□□□ -1.33
RPP40-201ENST00000319533 C7orf65Q6ZTY9 151 aa6.77□□□□□ -1.33
RPP40-201ENST00000319533 UQCRQO14949 82 aa6.76□□□□□ -1.33
RPP40-201ENST00000319533 TP53AIP1Q9HCN2 124 aa6.76□□□□□ -1.33
RPP40-201ENST00000319533 SMIM20Q8N5G0 67 aa6.75□□□□□ -1.33
RPP40-201ENST00000319533 SERP2Q8N6R1 65 aa6.75□□□□□ -1.33
RPP40-201ENST00000319533 ANAPC13Q9BS18 74 aa6.75□□□□□ -1.33
RPP40-201ENST00000319533 TRAV22A0A0B4J277 110 aa6.73□□□□□ -1.33
RPP40-201ENST00000319533 H0Y9P7 68 aa6.73□□□□□ -1.33
RPP40-201ENST00000319533 COX7CP15954 63 aa6.7□□□□□ -1.34
RPP40-201ENST00000319533 H1FX-AS1Q4G0G2 97 aa6.69□□□□□ -1.34
RPP40-201ENST00000319533 C5orf47Q569G3 176 aa6.67□□□□□ -1.34
RPP40-201ENST00000319533 CCDC179H3BU77 68 aa6.66□□□□□ -1.34
RPP40-201ENST00000319533 C20orf197Q8N268 126 aa6.65□□□□□ -1.34
RPP40-201ENST00000319533 LINC00208Q96KT6 92 aa6.65□□□□□ -1.34
RPP40-201ENST00000319533 NEBP20929 6669 aa6.64□□□□□ -1.35
RPP40-201ENST00000319533 MP68P56378 58 aa6.64□□□□□ -1.35
RPP40-201ENST00000319533 SNURFQ9Y675 71 aa6.64□□□□□ -1.35
RPP40-201ENST00000319533 C4orf26Q17RF5 130 aa6.63□□□□□ -1.35
RPP40-201ENST00000319533 C1orf64Q8NEQ6 169 aa6.63□□□□□ -1.35
RPP40-201ENST00000319533 CYSTM1Q9H1C7 97 aa6.63□□□□□ -1.35
RPP40-201ENST00000319533 LOC101927531A0A1B0GV80 90 aa6.61□□□□□ -1.35
RPP40-201ENST00000319533 H3BPC8 53 aa6.61□□□□□ -1.35
RPP40-201ENST00000319533 PCP4P48539 62 aa6.6□□□□□ -1.35
RPP40-201ENST00000319533 CYP4F30PQ9H0H9 118 aa6.6□□□□□ -1.35
RPP40-201ENST00000319533 KLKP1Q107X0 134 aa6.59□□□□□ -1.35
RPP40-201ENST00000319533 MUC12Q9UKN1 5478 aa6.54□□□□□ -1.36
RPP40-201ENST00000319533 H7BZZ5 65 aa6.51□□□□□ -1.37
RPP40-201ENST00000319533 S4R3F8 94 aa6.5□□□□□ -1.37
RPP40-201ENST00000319533 MT1BP07438 61 aa6.47□□□□□ -1.37
RPP40-201ENST00000319533 KRTAP15-1Q3LI76 137 aa6.47□□□□□ -1.37
RPP40-201ENST00000319533 A6NN06 94 aa6.46□□□□□ -1.38
RPP40-201ENST00000319533 NDUFC1O43677 76 aa6.44□□□□□ -1.38
RPP40-201ENST00000319533 CSAG1Q6PB30 78 aa6.44□□□□□ -1.38
RPP40-201ENST00000319533 KRTAP19-8Q3LI54 63 aa6.43□□□□□ -1.38
RPP40-201ENST00000319533 KRTAP20-1Q3LI63 56 aa6.43□□□□□ -1.38
RPP40-201ENST00000319533 LCA10Q71F78 164 aa6.42□□□□□ -1.38
RPP40-201ENST00000319533 Q5VV11 94 aa6.41□□□□□ -1.38
RPP40-201ENST00000319533 SPRR2GQ9BYE4 73 aa6.41□□□□□ -1.38
RPP40-201ENST00000319533 SPANXA2-OT1Q8N9U9 137 aa6.4□□□□□ -1.38
RPP40-201ENST00000319533 KRTAP10-5P60370 271 aa6.38□□□□□ -1.39
RPP40-201ENST00000319533 KRTAP5-9P26371 169 aa6.37□□□□□ -1.39
RPP40-201ENST00000319533 DMAC1Q96GE9 116 aa6.37□□□□□ -1.39
RPP40-201ENST00000319533 TMEM258P61165 79 aa6.36□□□□□ -1.39
RPP40-201ENST00000319533 KMT2DO14686 5537 aa6.33□□□□□ -1.4
RPP40-201ENST00000319533 MDN1Q9NU22 5596 aa6.32□□□□□ -1.4
RPP40-201ENST00000319533 A8MUN3 132 aa6.29□□□□□ -1.4
RPP40-201ENST00000319533 ATP5EP56381 51 aaPredicted RBP6.29□□□□□ -1.4
RPP40-201ENST00000319533 ACYP2P14621 99 aa6.25□□□□□ -1.41
RPP40-201ENST00000319533 COA5Q86WW8 74 aa6.24□□□□□ -1.41
RPP40-201ENST00000319533 CRIPTQ9P021 101 aa6.19□□□□□ -1.42
RPP40-201ENST00000319533 H0YAA0 97 aa6.16□□□□□ -1.42
RPP40-201ENST00000319533 KRTAP2-3P0C7H8 128 aa6.16□□□□□ -1.42
RPP40-201ENST00000319533 KRTAP2-4Q9BYR9 128 aa6.16□□□□□ -1.42
RPP40-201ENST00000319533 SERP1Q9Y6X1 66 aa6.16□□□□□ -1.42
RPP40-201ENST00000319533 CHKB-CPT1BH3BT56 60 aa6.14□□□□□ -1.43
RPP40-201ENST00000319533 ADM2Q7Z4H4 148 aa6.11□□□□□ -1.43
RPP40-201ENST00000319533 RPS28P62857 69 aaKnown RBP6.04□□□□□ -1.44
RPP40-201ENST00000319533 SPRR2FQ96RM1 72 aa6.04□□□□□ -1.44
RPP40-201ENST00000319533 SPRR2EP22531 72 aa6.02□□□□□ -1.45
RPP40-201ENST00000319533 SPRR2BP35325 72 aa6.02□□□□□ -1.45
RPP40-201ENST00000319533 SPRR2AP35326 72 aa6.02□□□□□ -1.45
RPP40-201ENST00000319533 SPTSSBQ8NFR3 76 aa6.02□□□□□ -1.45
RPP40-201ENST00000319533 MT1XP80297 61 aa5.99□□□□□ -1.45
RPP40-201ENST00000319533 PRO2289Q9P1D8 64 aa5.99□□□□□ -1.45
RPP40-201ENST00000319533 R4GN34 69 aa5.97□□□□□ -1.45
RPP40-201ENST00000319533 SMIM26A0A096LP01 95 aa5.95□□□□□ -1.46
RPP40-201ENST00000319533 P0C880 135 aa5.95□□□□□ -1.46
RPP40-201ENST00000319533 LCE1AQ5T7P2 110 aa5.95□□□□□ -1.46
RPP40-201ENST00000319533 KRTAP2-2Q9BYT5 123 aa5.94□□□□□ -1.46
RPP40-201ENST00000319533 KRTAP2-1Q9BYU5 128 aa5.94□□□□□ -1.46
RPP40-201ENST00000319533 KRTAP8-1Q8IUC2 63 aa5.93□□□□□ -1.46
RPP40-201ENST00000319533 LINC01558Q9Y6Z2 57 aa5.93□□□□□ -1.46
RPP40-201ENST00000319533 KRTAP12-2P59991 146 aa5.92□□□□□ -1.46
RPP40-201ENST00000319533 M0QZ58 72 aa5.91□□□□□ -1.46
RPP40-201ENST00000319533 Q1T7F1 81 aa5.9□□□□□ -1.46
RPP40-201ENST00000319533 KRTAP5-3Q6L8H2 238 aa5.9□□□□□ -1.46
RPP40-201ENST00000319533 PLAC4Q8WY50 150 aa5.9□□□□□ -1.46
RPP40-201ENST00000319533 A0A1B0GU69 56 aa5.85□□□□□ -1.47
RPP40-201ENST00000319533 PRR15LQ9BU68 103 aa5.85□□□□□ -1.47
RPP40-201ENST00000319533 SPRR2DP22532 72 aa5.83□□□□□ -1.48
RPP40-201ENST00000319533 LINC01554Q52M75 96 aa5.83□□□□□ -1.48
RPP40-201ENST00000319533 V9GYY9 64 aa5.83□□□□□ -1.48
RPP40-201ENST00000319533 PSPHP1O15172 72 aa5.82□□□□□ -1.48
RPP40-201ENST00000319533 SEC61GP60059 68 aa5.8□□□□□ -1.48
RPP40-201ENST00000319533 KRTAP13-4Q3LI77 160 aa5.77□□□□□ -1.49
RPP40-201ENST00000319533 GPR98Q8WXG9 6306 aa5.76□□□□□ -1.49
RPP40-201ENST00000319533 A0A1B0GU33 70 aa5.73□□□□□ -1.49
RPP40-201ENST00000319533 KRTAP10-12P60413 245 aa5.7□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 90.4 ms