RNA–Protein interactions for RNA: ENST00000315962.8

TRIM55-202, Transcript of tripartite motif containing 55, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM55, Length 2,914 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM55-202ENST00000315962 MIR22HGQ0VDD5 57 aa4.18□□□□□ -1.74
TRIM55-202ENST00000315962 ABCA13Q86UQ4 5058 aa4.16□□□□□ -1.74
TRIM55-202ENST00000315962 BIRC6Q9NR09 4857 aa4.14□□□□□ -1.75
TRIM55-202ENST00000315962 UQCR11O14957 56 aa4.14□□□□□ -1.75
TRIM55-202ENST00000315962 CSAG1Q6PB30 78 aa4.14□□□□□ -1.75
TRIM55-202ENST00000315962 TNXBP22105 4242 aa4.13□□□□□ -1.75
TRIM55-202ENST00000315962 KRTAP10-8P60410 259 aa4.12□□□□□ -1.75
TRIM55-202ENST00000315962 SPATA8Q6RVD6 105 aa4.12□□□□□ -1.75
TRIM55-202ENST00000315962 CRIPTQ9P021 101 aa4.11□□□□□ -1.75
TRIM55-202ENST00000315962 LPAP08519 4548 aa4.1□□□□□ -1.75
TRIM55-202ENST00000315962 MT1HL1P0DM35 61 aa4.09□□□□□ -1.75
TRIM55-202ENST00000315962 RPS29P62273 56 aaKnown RBP4.09□□□□□ -1.75
TRIM55-202ENST00000315962 ROMO1P60602 79 aa4.07□□□□□ -1.76
TRIM55-202ENST00000315962 LRP2P98164 4655 aa4.06□□□□□ -1.76
TRIM55-202ENST00000315962 H0YAA0 97 aa4.05□□□□□ -1.76
TRIM55-202ENST00000315962 MUC2Q02817 5179 aa4.05□□□□□ -1.76
TRIM55-202ENST00000315962 PCLOQ9Y6V0 5065 aa4.03□□□□□ -1.76
TRIM55-202ENST00000315962 C20orf166-AS1Q96NR2 134 aa4.03□□□□□ -1.76
TRIM55-202ENST00000315962 A8MUU9 505 aa4.03□□□□□ -1.76
TRIM55-202ENST00000315962 HERC2O95714 4834 aa4.01□□□□□ -1.77
TRIM55-202ENST00000315962 XP32Q5T750 250 aa4.01□□□□□ -1.77
TRIM55-202ENST00000315962 KRTAP3-1Q9BYR8 98 aa4.01□□□□□ -1.77
TRIM55-202ENST00000315962 A0A1B0GU33 70 aa3.98□□□□□ -1.77
TRIM55-202ENST00000315962 P0C880 135 aa3.98□□□□□ -1.77
TRIM55-202ENST00000315962 HERC1Q15751 4861 aa3.97□□□□□ -1.77
TRIM55-202ENST00000315962 A0A0D9SG42 100 aa3.95□□□□□ -1.78
TRIM55-202ENST00000315962 KRTAP25-1Q3LHN0 102 aa3.95□□□□□ -1.78
TRIM55-202ENST00000315962 RPL37P61927 97 aaKnown RBP3.94□□□□□ -1.78
TRIM55-202ENST00000315962 H1FX-AS1Q4G0G2 97 aa3.94□□□□□ -1.78
TRIM55-202ENST00000315962 COX6B2Q6YFQ2 88 aa3.91□□□□□ -1.78
TRIM55-202ENST00000315962 KRTAP13-4Q3LI77 160 aa3.88□□□□□ -1.79
TRIM55-202ENST00000315962 TPRXLQ17RH7 258 aa3.87□□□□□ -1.79
TRIM55-202ENST00000315962 C10orf95Q9H7T3 257 aa3.87□□□□□ -1.79
TRIM55-202ENST00000315962 LCE2CQ5TA81 110 aa3.86□□□□□ -1.79
TRIM55-202ENST00000315962 RNF213Q63HN8 5207 aa3.85□□□□□ -1.79
TRIM55-202ENST00000315962 LCE2BO14633 110 aa3.84□□□□□ -1.79
TRIM55-202ENST00000315962 K7ERS5 55 aa3.83□□□□□ -1.8
TRIM55-202ENST00000315962 LCE2AQ5TA79 106 aaPredicted RBP3.82□□□□□ -1.8
TRIM55-202ENST00000315962 KRTAP4-1Q9BYQ7 146 aa3.82□□□□□ -1.8
TRIM55-202ENST00000315962 KRTAP10-6P60371 365 aaPredicted RBP3.81□□□□□ -1.8
TRIM55-202ENST00000315962 UBR4Q5T4S7 5183 aa3.8□□□□□ -1.8
TRIM55-202ENST00000315962 FAT4Q6V0I7 4981 aa3.8□□□□□ -1.8
TRIM55-202ENST00000315962 NDUFAF8A1L188 74 aa3.79□□□□□ -1.8
TRIM55-202ENST00000315962 S4R3F8 94 aa3.78□□□□□ -1.8
TRIM55-202ENST00000315962 SPINT4Q6UDR6 99 aa3.77□□□□□ -1.81
TRIM55-202ENST00000315962 KRTAP15-1Q3LI76 137 aa3.75□□□□□ -1.81
TRIM55-202ENST00000315962 KRTAP12-2P59991 146 aa3.74□□□□□ -1.81
TRIM55-202ENST00000315962 SEC61BP60468 96 aaKnown RBP3.74□□□□□ -1.81
TRIM55-202ENST00000315962 LUZP6Q538Z0 58 aa3.72□□□□□ -1.81
TRIM55-202ENST00000315962 HMCN2Q8NDA2 5059 aa3.72□□□□□ -1.81
TRIM55-202ENST00000315962 MUC17Q685J3 4493 aa3.69□□□□□ -1.82
TRIM55-202ENST00000315962 KRTAP12-1P59990 96 aa3.65□□□□□ -1.82
TRIM55-202ENST00000315962 LORP23490 312 aaPredicted RBP3.61□□□□□ -1.83
TRIM55-202ENST00000315962 KRTAP19-2Q3LHN2 52 aa3.61□□□□□ -1.83
TRIM55-202ENST00000315962 KRTAP23-1A1A580 65 aa3.6□□□□□ -1.83
TRIM55-202ENST00000315962 M0QZ58 72 aa3.58□□□□□ -1.84
TRIM55-202ENST00000315962 M0R2T5 61 aa3.55□□□□□ -1.84
TRIM55-202ENST00000315962 R4GN34 69 aa3.55□□□□□ -1.84
TRIM55-202ENST00000315962 FLGP20930 4061 aaPredicted RBP3.5□□□□□ -1.85
TRIM55-202ENST00000315962 MT1HP80294 61 aa3.45□□□□□ -1.86
TRIM55-202ENST00000315962 PLAC4Q8WY50 150 aa3.41□□□□□ -1.86
TRIM55-202ENST00000315962 CAMK2N1Q7Z7J9 78 aa3.4□□□□□ -1.87
TRIM55-202ENST00000315962 USH2AO75445 5202 aa3.39□□□□□ -1.87
TRIM55-202ENST00000315962 KRTAP10-10P60014 251 aa3.39□□□□□ -1.87
TRIM55-202ENST00000315962 FSIP2Q5CZC0 6907 aa3.37□□□□□ -1.87
TRIM55-202ENST00000315962 MT1FP04733 61 aa3.36□□□□□ -1.87
TRIM55-202ENST00000315962 MT2AP02795 61 aa3.33□□□□□ -1.88
TRIM55-202ENST00000315962 KRTAP9-8Q9BYQ0 159 aa3.33□□□□□ -1.88
TRIM55-202ENST00000315962 KRTAP19-1Q8IUB9 90 aa3.31□□□□□ -1.88
TRIM55-202ENST00000315962 SPRR2GQ9BYE4 73 aa3.25□□□□□ -1.89
TRIM55-202ENST00000315962 PRO2289Q9P1D8 64 aa3.24□□□□□ -1.89
TRIM55-202ENST00000315962 HMCN1Q96RW7 5635 aa3.22□□□□□ -1.89
TRIM55-202ENST00000315962 TNP1P09430 55 aa3.19□□□□□ -1.9
TRIM55-202ENST00000315962 KRTAP9-3Q9BYQ3 159 aa3.19□□□□□ -1.9
TRIM55-202ENST00000315962 KRTAP9-2Q9BYQ4 174 aa3.18□□□□□ -1.9
TRIM55-202ENST00000315962 PP632Q6XCG6 107 aa3.18□□□□□ -1.9
TRIM55-202ENST00000315962 KMT2DO14686 5537 aa3.17□□□□□ -1.9
TRIM55-202ENST00000315962 MT1BP07438 61 aa3.16□□□□□ -1.9
TRIM55-202ENST00000315962 LOC100996750A0A140TA64 210 aa3.16□□□□□ -1.9
TRIM55-202ENST00000315962 KRTAP4-6Q9BYQ5 205 aa3.16□□□□□ -1.9
TRIM55-202ENST00000315962 KRTAP19-8Q3LI54 63 aa3.1□□□□□ -1.91
TRIM55-202ENST00000315962 KRTAP10-5P60370 271 aa3.1□□□□□ -1.91
TRIM55-202ENST00000315962 MT1XP80297 61 aa3.1□□□□□ -1.91
TRIM55-202ENST00000315962 LCE3AQ5TA76 89 aa3.1□□□□□ -1.91
TRIM55-202ENST00000315962 KRTAP9-6A0A140TA67 174 aa3.07□□□□□ -1.92
TRIM55-202ENST00000315962 INE1O15225 51 aa3.07□□□□□ -1.92
TRIM55-202ENST00000315962 SPRR5A0A1B0GTR4 108 aa3.06□□□□□ -1.92
TRIM55-202ENST00000315962 KRTAP10-7P60409 375 aaPredicted RBP3.06□□□□□ -1.92
TRIM55-202ENST00000315962 SSPOA2VEC9 5147 aa3□□□□□ -1.93
TRIM55-202ENST00000315962 KRTAP4-8A0A0G2JLE6 195 aa2.99□□□□□ -1.93
TRIM55-202ENST00000315962 KRTAP4-8Q9BYQ9 185 aa2.99□□□□□ -1.93
TRIM55-202ENST00000315962 KRTAP10-12P60413 245 aa2.97□□□□□ -1.93
TRIM55-202ENST00000315962 CRCT1Q9UGL9 99 aa2.97□□□□□ -1.93
TRIM55-202ENST00000315962 KRTAP12-3P60328 96 aa2.89□□□□□ -1.95
TRIM55-202ENST00000315962 KRTAP19-5Q3LI72 72 aa2.87□□□□□ -1.95
TRIM55-202ENST00000315962 KRTAP8-1Q8IUC2 63 aa2.87□□□□□ -1.95
TRIM55-202ENST00000315962 FCGBPQ9Y6R7 5405 aaPredicted RBP2.86□□□□□ -1.95
TRIM55-202ENST00000315962 SYNE2Q8WXH0 6885 aaKnown RBP2.84□□□□□ -1.95
TRIM55-202ENST00000315962 MUC12Q9UKN1 5478 aa2.83□□□□□ -1.96
TRIM55-202ENST00000315962 DSTQ03001 7570 aaKnown RBP2.83□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 165.1 ms