RNA–Protein interactions for RNA: ENST00000315491.11

TUBB3-201, Transcript of tubulin beta 3 class III, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TUBB3, Length 1,769 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB3-201ENST00000315491 A8MUU9 505 aa8.73□□□□□ -1.01
TUBB3-201ENST00000315491 RPL37P61927 97 aaKnown RBP8.68□□□□□ -1.02
TUBB3-201ENST00000315491 LRP2P98164 4655 aa8.63□□□□□ -1.03
TUBB3-201ENST00000315491 ACYP2P14621 99 aa8.6□□□□□ -1.03
TUBB3-201ENST00000315491 Q5W150 140 aa8.57□□□□□ -1.04
TUBB3-201ENST00000315491 MUC17Q685J3 4493 aa8.56□□□□□ -1.04
TUBB3-201ENST00000315491 SEC61BP60468 96 aaKnown RBP8.56□□□□□ -1.04
TUBB3-201ENST00000315491 SPATA8Q6RVD6 105 aa8.55□□□□□ -1.04
TUBB3-201ENST00000315491 DMAC1Q96GE9 116 aa8.53□□□□□ -1.04
TUBB3-201ENST00000315491 PRAC1Q96KF2 57 aa8.53□□□□□ -1.04
TUBB3-201ENST00000315491 LINC01554Q52M75 96 aa8.51□□□□□ -1.05
TUBB3-201ENST00000315491 A0A1B0GU69 56 aa8.48□□□□□ -1.05
TUBB3-201ENST00000315491 ADM2Q7Z4H4 148 aa8.45□□□□□ -1.06
TUBB3-201ENST00000315491 IGKV2-30P06310 120 aa8.43□□□□□ -1.06
TUBB3-201ENST00000315491 IGKV2D-30A0A075B6S6 120 aa8.42□□□□□ -1.06
TUBB3-201ENST00000315491 MIR22HGQ0VDD5 57 aa8.42□□□□□ -1.06
TUBB3-201ENST00000315491 UQCR11O14957 56 aa8.41□□□□□ -1.06
TUBB3-201ENST00000315491 KRTAP4-1Q9BYQ7 146 aa8.38□□□□□ -1.07
TUBB3-201ENST00000315491 UBR4Q5T4S7 5183 aa8.36□□□□□ -1.07
TUBB3-201ENST00000315491 RNF213Q63HN8 5207 aa8.28□□□□□ -1.08
TUBB3-201ENST00000315491 H3BS24 57 aa8.27□□□□□ -1.09
TUBB3-201ENST00000315491 CSAG1Q6PB30 78 aa8.26□□□□□ -1.09
TUBB3-201ENST00000315491 MUC2Q02817 5179 aa8.2□□□□□ -1.1
TUBB3-201ENST00000315491 COX6B2Q6YFQ2 88 aa8.15□□□□□ -1.1
TUBB3-201ENST00000315491 KRTAP19-2Q3LHN2 52 aa8.1□□□□□ -1.11
TUBB3-201ENST00000315491 KRTAP3-1Q9BYR8 98 aa8.1□□□□□ -1.11
TUBB3-201ENST00000315491 KRTAP25-1Q3LHN0 102 aa8.07□□□□□ -1.12
TUBB3-201ENST00000315491 H1FX-AS1Q4G0G2 97 aa8.03□□□□□ -1.12
TUBB3-201ENST00000315491 LCE2CQ5TA81 110 aa8.02□□□□□ -1.13
TUBB3-201ENST00000315491 H0YAA0 97 aa7.99□□□□□ -1.13
TUBB3-201ENST00000315491 FAT4Q6V0I7 4981 aa7.97□□□□□ -1.13
TUBB3-201ENST00000315491 ROMO1P60602 79 aa7.96□□□□□ -1.14
TUBB3-201ENST00000315491 S4R3F8 94 aa7.92□□□□□ -1.14
TUBB3-201ENST00000315491 FLGP20930 4061 aaPredicted RBP7.91□□□□□ -1.14
TUBB3-201ENST00000315491 A0A1B0GU33 70 aa7.9□□□□□ -1.14
TUBB3-201ENST00000315491 MT1HP80294 61 aa7.88□□□□□ -1.15
TUBB3-201ENST00000315491 KRTAP3-3Q9BYR6 98 aa7.83□□□□□ -1.16
TUBB3-201ENST00000315491 K7ERS5 55 aa7.81□□□□□ -1.16
TUBB3-201ENST00000315491 M0R2T5 61 aa7.79□□□□□ -1.16
TUBB3-201ENST00000315491 LCE2AQ5TA79 106 aaPredicted RBP7.74□□□□□ -1.17
TUBB3-201ENST00000315491 P0C880 135 aa7.7□□□□□ -1.18
TUBB3-201ENST00000315491 KRTAP10-6P60371 365 aaPredicted RBP7.63□□□□□ -1.19
TUBB3-201ENST00000315491 CRIPTQ9P021 101 aa7.61□□□□□ -1.19
TUBB3-201ENST00000315491 LORP23490 312 aaPredicted RBP7.59□□□□□ -1.19
TUBB3-201ENST00000315491 KRTAP9-8Q9BYQ0 159 aa7.55□□□□□ -1.2
TUBB3-201ENST00000315491 MT2AP02795 61 aa7.51□□□□□ -1.21
TUBB3-201ENST00000315491 SPINT4Q6UDR6 99 aa7.51□□□□□ -1.21
TUBB3-201ENST00000315491 KRTAP3-2Q9BYR7 98 aa7.48□□□□□ -1.21
TUBB3-201ENST00000315491 MT1FP04733 61 aa7.46□□□□□ -1.21
TUBB3-201ENST00000315491 KRTAP15-1Q3LI76 137 aa7.46□□□□□ -1.21
TUBB3-201ENST00000315491 KRTAP10-10P60014 251 aa7.43□□□□□ -1.22
TUBB3-201ENST00000315491 KRTAP13-4Q3LI77 160 aa7.42□□□□□ -1.22
TUBB3-201ENST00000315491 A0A0D9SG42 100 aa7.35□□□□□ -1.23
TUBB3-201ENST00000315491 NDUFAF8A1L188 74 aa7.34□□□□□ -1.23
TUBB3-201ENST00000315491 C10orf95Q9H7T3 257 aa7.33□□□□□ -1.24
TUBB3-201ENST00000315491 KRTAP9-3Q9BYQ3 159 aa7.29□□□□□ -1.24
TUBB3-201ENST00000315491 R4GN34 69 aa7.28□□□□□ -1.24
TUBB3-201ENST00000315491 M0QZ58 72 aa7.26□□□□□ -1.25
TUBB3-201ENST00000315491 KRTAP19-1Q8IUB9 90 aa7.23□□□□□ -1.25
TUBB3-201ENST00000315491 KRTAP12-2P59991 146 aa7.23□□□□□ -1.25
TUBB3-201ENST00000315491 SPRR2GQ9BYE4 73 aa7.23□□□□□ -1.25
TUBB3-201ENST00000315491 KRTAP12-1P59990 96 aa7.2□□□□□ -1.26
TUBB3-201ENST00000315491 LCE2DQ5TA82 110 aaPredicted RBP7.14□□□□□ -1.27
TUBB3-201ENST00000315491 LCE2BO14633 110 aa7.13□□□□□ -1.27
TUBB3-201ENST00000315491 KRTAP19-8Q3LI54 63 aa7.09□□□□□ -1.27
TUBB3-201ENST00000315491 MT1BP07438 61 aa7□□□□□ -1.29
TUBB3-201ENST00000315491 USH2AO75445 5202 aa6.99□□□□□ -1.29
TUBB3-201ENST00000315491 KRTAP9-2Q9BYQ4 174 aa6.98□□□□□ -1.29
TUBB3-201ENST00000315491 PLAC4Q8WY50 150 aa6.95□□□□□ -1.3
TUBB3-201ENST00000315491 A0A0A0MQY5 61 aa6.9□□□□□ -1.31
TUBB3-201ENST00000315491 LUZP6Q538Z0 58 aa6.82□□□□□ -1.32
TUBB3-201ENST00000315491 SSPOA2VEC9 5147 aa6.81□□□□□ -1.32
TUBB3-201ENST00000315491 CAMK2N1Q7Z7J9 78 aa6.8□□□□□ -1.32
TUBB3-201ENST00000315491 FSIP2Q5CZC0 6907 aa6.79□□□□□ -1.32
TUBB3-201ENST00000315491 KRTAP19-6Q3LI70 58 aa6.76□□□□□ -1.33
TUBB3-201ENST00000315491 PP632Q6XCG6 107 aa6.73□□□□□ -1.33
TUBB3-201ENST00000315491 MT1XP80297 61 aa6.72□□□□□ -1.33
TUBB3-201ENST00000315491 KRTAP10-5P60370 271 aa6.71□□□□□ -1.34
TUBB3-201ENST00000315491 CRCT1Q9UGL9 99 aa6.7□□□□□ -1.34
TUBB3-201ENST00000315491 PRO2289Q9P1D8 64 aa6.69□□□□□ -1.34
TUBB3-201ENST00000315491 KRTAP9-6A0A140TA67 174 aa6.66□□□□□ -1.34
TUBB3-201ENST00000315491 FCGBPQ9Y6R7 5405 aaPredicted RBP6.54□□□□□ -1.36
TUBB3-201ENST00000315491 KRTAP23-1A1A580 65 aa6.47□□□□□ -1.37
TUBB3-201ENST00000315491 SPRR5A0A1B0GTR4 108 aa6.45□□□□□ -1.38
TUBB3-201ENST00000315491 KRTAP10-7P60409 375 aaPredicted RBP6.44□□□□□ -1.38
TUBB3-201ENST00000315491 TNP1P09430 55 aa6.42□□□□□ -1.38
TUBB3-201ENST00000315491 KRTAP10-12P60413 245 aa6.38□□□□□ -1.39
TUBB3-201ENST00000315491 MACF1Q9UPN3 7388 aaKnown RBP6.26□□□□□ -1.41
TUBB3-201ENST00000315491 KRTAP4-8A0A0G2JLE6 195 aa6.24□□□□□ -1.41
TUBB3-201ENST00000315491 KRTAP4-8Q9BYQ9 185 aa6.24□□□□□ -1.41
TUBB3-201ENST00000315491 KMT2DO14686 5537 aa6.22□□□□□ -1.41
TUBB3-201ENST00000315491 KRTAP9-1A8MXZ3 250 aaPredicted RBP6.22□□□□□ -1.41
TUBB3-201ENST00000315491 LCE3AQ5TA76 89 aa6.19□□□□□ -1.42
TUBB3-201ENST00000315491 KRTAP8-1Q8IUC2 63 aa6.16□□□□□ -1.42
TUBB3-201ENST00000315491 SYNE2Q8WXH0 6885 aaKnown RBP6.11□□□□□ -1.43
TUBB3-201ENST00000315491 INE1O15225 51 aa6.06□□□□□ -1.44
TUBB3-201ENST00000315491 KRTAP19-5Q3LI72 72 aa6.02□□□□□ -1.45
TUBB3-201ENST00000315491 KRTAP9-7A8MTY7 169 aa6.01□□□□□ -1.45
TUBB3-201ENST00000315491 KRTAP6-3Q3LI67 103 aa6.01□□□□□ -1.45
TUBB3-201ENST00000315491 KRTAP19-7Q3SYF9 63 aa6□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms