RNA–Protein interactions for RNA: ENST00000315127.8

EDC3-201, Transcript of enhancer of mRNA decapping 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene EDC3, Length 3,763 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EDC3-201ENST00000315127 CRIPTQ9P021 101 aa7.4□□□□□ -1.22
EDC3-201ENST00000315127 FAT2Q9NYQ8 4349 aa7.4□□□□□ -1.23
EDC3-201ENST00000315127 SEC61BP60468 96 aaKnown RBP7.37□□□□□ -1.23
EDC3-201ENST00000315127 PRAC1Q96KF2 57 aa7.36□□□□□ -1.23
EDC3-201ENST00000315127 CSAG1Q6PB30 78 aa7.35□□□□□ -1.23
EDC3-201ENST00000315127 M0R2T5 61 aa7.34□□□□□ -1.24
EDC3-201ENST00000315127 KRTAP17-1Q9BYP8 105 aa7.31□□□□□ -1.24
EDC3-201ENST00000315127 MT1HL1P0DM35 61 aa7.31□□□□□ -1.24
EDC3-201ENST00000315127 ADM2Q7Z4H4 148 aa7.3□□□□□ -1.24
EDC3-201ENST00000315127 PKD1P98161 4303 aa7.28□□□□□ -1.24
EDC3-201ENST00000315127 KRTAP3-1Q9BYR8 98 aa7.24□□□□□ -1.25
EDC3-201ENST00000315127 EPPK1P58107 5090 aaKnown RBP7.24□□□□□ -1.25
EDC3-201ENST00000315127 H1FX-AS1Q4G0G2 97 aa7.23□□□□□ -1.25
EDC3-201ENST00000315127 R4GN34 69 aa7.2□□□□□ -1.26
EDC3-201ENST00000315127 KTN1-AS1Q86SY8 53 aa7.2□□□□□ -1.26
EDC3-201ENST00000315127 TPRXLQ17RH7 258 aa7.18□□□□□ -1.26
EDC3-201ENST00000315127 LRP2P98164 4655 aa7.18□□□□□ -1.26
EDC3-201ENST00000315127 M0QZ58 72 aa7.17□□□□□ -1.26
EDC3-201ENST00000315127 HERC2O95714 4834 aa7.13□□□□□ -1.27
EDC3-201ENST00000315127 HSPG2P98160 4391 aa7.13□□□□□ -1.27
EDC3-201ENST00000315127 P0C880 135 aa7.13□□□□□ -1.27
EDC3-201ENST00000315127 H0YAA0 97 aa7.07□□□□□ -1.28
EDC3-201ENST00000315127 CAMK2N1Q7Z7J9 78 aa7.05□□□□□ -1.28
EDC3-201ENST00000315127 A6NN06 94 aa7.02□□□□□ -1.29
EDC3-201ENST00000315127 LPAP08519 4548 aa7.01□□□□□ -1.29
EDC3-201ENST00000315127 ABCA13Q86UQ4 5058 aa6.92□□□□□ -1.3
EDC3-201ENST00000315127 PKHD1L1Q86WI1 4243 aa6.86□□□□□ -1.31
EDC3-201ENST00000315127 KRTAP13-4Q3LI77 160 aa6.86□□□□□ -1.31
EDC3-201ENST00000315127 KRTAP3-3Q9BYR6 98 aa6.85□□□□□ -1.31
EDC3-201ENST00000315127 ROMO1P60602 79 aa6.84□□□□□ -1.31
EDC3-201ENST00000315127 MUC2Q02817 5179 aa6.83□□□□□ -1.32
EDC3-201ENST00000315127 C10orf95Q9H7T3 257 aa6.83□□□□□ -1.32
EDC3-201ENST00000315127 HERC1Q15751 4861 aa6.81□□□□□ -1.32
EDC3-201ENST00000315127 KRTAP10-6P60371 365 aaPredicted RBP6.81□□□□□ -1.32
EDC3-201ENST00000315127 KRTAP4-1Q9BYQ7 146 aa6.78□□□□□ -1.32
EDC3-201ENST00000315127 KRTAP12-2P59991 146 aa6.72□□□□□ -1.33
EDC3-201ENST00000315127 BIRC6Q9NR09 4857 aa6.72□□□□□ -1.33
EDC3-201ENST00000315127 TNXBP22105 4242 aa6.72□□□□□ -1.33
EDC3-201ENST00000315127 RNF213Q63HN8 5207 aa6.71□□□□□ -1.34
EDC3-201ENST00000315127 PCLOQ9Y6V0 5065 aa6.71□□□□□ -1.34
EDC3-201ENST00000315127 KRTAP3-2Q9BYR7 98 aa6.69□□□□□ -1.34
EDC3-201ENST00000315127 KRTAP10-10P60014 251 aa6.68□□□□□ -1.34
EDC3-201ENST00000315127 KRTAP25-1Q3LHN0 102 aa6.63□□□□□ -1.35
EDC3-201ENST00000315127 LORP23490 312 aaPredicted RBP6.63□□□□□ -1.35
EDC3-201ENST00000315127 PLAC4Q8WY50 150 aa6.62□□□□□ -1.35
EDC3-201ENST00000315127 FAT4Q6V0I7 4981 aa6.6□□□□□ -1.35
EDC3-201ENST00000315127 KRTAP12-1P59990 96 aa6.59□□□□□ -1.36
EDC3-201ENST00000315127 UBR4Q5T4S7 5183 aa6.56□□□□□ -1.36
EDC3-201ENST00000315127 TNP1P09430 55 aa6.36□□□□□ -1.39
EDC3-201ENST00000315127 FSIP2Q5CZC0 6907 aa6.36□□□□□ -1.39
EDC3-201ENST00000315127 H3BS24 57 aa6.25□□□□□ -1.41
EDC3-201ENST00000315127 HMCN2Q8NDA2 5059 aa6.25□□□□□ -1.41
EDC3-201ENST00000315127 LUZP6Q538Z0 58 aa6.22□□□□□ -1.41
EDC3-201ENST00000315127 MT1HP80294 61 aa6.2□□□□□ -1.42
EDC3-201ENST00000315127 NDUFAF8A1L188 74 aa6.18□□□□□ -1.42
EDC3-201ENST00000315127 MUC17Q685J3 4493 aa6.09□□□□□ -1.43
EDC3-201ENST00000315127 MT1FP04733 61 aa6.08□□□□□ -1.44
EDC3-201ENST00000315127 MT2AP02795 61 aa6.06□□□□□ -1.44
EDC3-201ENST00000315127 LCE2CQ5TA81 110 aa6.04□□□□□ -1.44
EDC3-201ENST00000315127 KRTAP19-2Q3LHN2 52 aa6.02□□□□□ -1.45
EDC3-201ENST00000315127 FLGP20930 4061 aaPredicted RBP6□□□□□ -1.45
EDC3-201ENST00000315127 PP632Q6XCG6 107 aa5.97□□□□□ -1.45
EDC3-201ENST00000315127 PRO2289Q9P1D8 64 aa5.94□□□□□ -1.46
EDC3-201ENST00000315127 USH2AO75445 5202 aa5.92□□□□□ -1.46
EDC3-201ENST00000315127 KRTAP19-1Q8IUB9 90 aa5.9□□□□□ -1.46
EDC3-201ENST00000315127 KRTAP9-8Q9BYQ0 159 aa5.83□□□□□ -1.48
EDC3-201ENST00000315127 SPRR2GQ9BYE4 73 aa5.83□□□□□ -1.48
EDC3-201ENST00000315127 LCE3AQ5TA76 89 aa5.83□□□□□ -1.48
EDC3-201ENST00000315127 KRTAP10-12P60413 245 aa5.76□□□□□ -1.49
EDC3-201ENST00000315127 KRTAP15-1Q3LI76 137 aa5.67□□□□□ -1.5
EDC3-201ENST00000315127 MT1BP07438 61 aa5.63□□□□□ -1.51
EDC3-201ENST00000315127 KRTAP12-3P60328 96 aa5.61□□□□□ -1.51
EDC3-201ENST00000315127 KMT2DO14686 5537 aa5.6□□□□□ -1.51
EDC3-201ENST00000315127 KRTAP10-7P60409 375 aaPredicted RBP5.59□□□□□ -1.51
EDC3-201ENST00000315127 A0A0A0MQY5 61 aa5.59□□□□□ -1.51
EDC3-201ENST00000315127 KRTAP9-3Q9BYQ3 159 aa5.59□□□□□ -1.51
EDC3-201ENST00000315127 MT1XP80297 61 aa5.55□□□□□ -1.52
EDC3-201ENST00000315127 LCE2BO14633 110 aa5.55□□□□□ -1.52
EDC3-201ENST00000315127 KRTAP10-5P60370 271 aa5.52□□□□□ -1.53
EDC3-201ENST00000315127 KRTAP19-8Q3LI54 63 aa5.52□□□□□ -1.53
EDC3-201ENST00000315127 KRTAP4-8A0A0G2JLE6 195 aa5.51□□□□□ -1.53
EDC3-201ENST00000315127 KRTAP4-8Q9BYQ9 185 aa5.51□□□□□ -1.53
EDC3-201ENST00000315127 CRCT1Q9UGL9 99 aa5.49□□□□□ -1.53
EDC3-201ENST00000315127 OBSCNQ5VST9 7968 aa5.47□□□□□ -1.53
EDC3-201ENST00000315127 DSTQ03001 7570 aaKnown RBP5.42□□□□□ -1.54
EDC3-201ENST00000315127 KRTAP19-5Q3LI72 72 aa5.39□□□□□ -1.55
EDC3-201ENST00000315127 LCE2AQ5TA79 106 aaPredicted RBP5.37□□□□□ -1.55
EDC3-201ENST00000315127 KRTAP8-1Q8IUC2 63 aa5.34□□□□□ -1.55
EDC3-201ENST00000315127 SYNE1Q8NF91 8797 aaKnown RBP5.29□□□□□ -1.56
EDC3-201ENST00000315127 KRTAP23-1A1A580 65 aa5.29□□□□□ -1.56
EDC3-201ENST00000315127 FCGBPQ9Y6R7 5405 aaPredicted RBP5.26□□□□□ -1.57
EDC3-201ENST00000315127 SSPOA2VEC9 5147 aa5.19□□□□□ -1.58
EDC3-201ENST00000315127 SPRR2FQ96RM1 72 aa5.17□□□□□ -1.58
EDC3-201ENST00000315127 KRTAP4-7Q9BYR0 210 aa5.17□□□□□ -1.58
EDC3-201ENST00000315127 MUC12Q9UKN1 5478 aa5.15□□□□□ -1.58
EDC3-201ENST00000315127 SYNE2Q8WXH0 6885 aaKnown RBP5.05□□□□□ -1.6
EDC3-201ENST00000315127 LCE3CQ5T5A8 94 aa5.05□□□□□ -1.6
EDC3-201ENST00000315127 MACF1Q9UPN3 7388 aaKnown RBP4.98□□□□□ -1.61
EDC3-201ENST00000315127 KRTAP9-2Q9BYQ4 174 aa4.93□□□□□ -1.62
EDC3-201ENST00000315127 KRTAP4-3Q9BYR4 195 aa4.92□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 204.4 ms