RNA–Protein interactions for RNA: ENST00000314675.11

UBXN11-201, Transcript of UBX domain protein 11, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene UBXN11, Length 2,254 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN11-201ENST00000314675 COX6B2Q6YFQ2 88 aa10.3□□□□□ -0.76
UBXN11-201ENST00000314675 SPTSSBQ8NFR3 76 aa10.29□□□□□ -0.76
UBXN11-201ENST00000314675 PCLOQ9Y6V0 5065 aa10.28□□□□□ -0.76
UBXN11-201ENST00000314675 CDC42SE1Q9NRR8 79 aa10.28□□□□□ -0.76
UBXN11-201ENST00000314675 SEC61GP60059 68 aa10.24□□□□□ -0.77
UBXN11-201ENST00000314675 A6NN06 94 aa10.18□□□□□ -0.78
UBXN11-201ENST00000314675 HERC1Q15751 4861 aa10.16□□□□□ -0.78
UBXN11-201ENST00000314675 KTN1-AS1Q86SY8 53 aa10.16□□□□□ -0.78
UBXN11-201ENST00000314675 A0A1B0GU69 56 aa10.1□□□□□ -0.79
UBXN11-201ENST00000314675 SEC61BP60468 96 aaKnown RBP10.09□□□□□ -0.79
UBXN11-201ENST00000314675 KRTAP3-3Q9BYR6 98 aa9.99□□□□□ -0.81
UBXN11-201ENST00000314675 RBM12B-AS1Q9P1G2 102 aa9.99□□□□□ -0.81
UBXN11-201ENST00000314675 H1FX-AS1Q4G0G2 97 aa9.98□□□□□ -0.81
UBXN11-201ENST00000314675 HMCN2Q8NDA2 5059 aa9.97□□□□□ -0.81
UBXN11-201ENST00000314675 S4R3F8 94 aa9.96□□□□□ -0.81
UBXN11-201ENST00000314675 MUC17Q685J3 4493 aa9.96□□□□□ -0.81
UBXN11-201ENST00000314675 KRTAP4-1Q9BYQ7 146 aa9.96□□□□□ -0.82
UBXN11-201ENST00000314675 MUC2Q02817 5179 aa9.92□□□□□ -0.82
UBXN11-201ENST00000314675 SPATA8Q6RVD6 105 aa9.87□□□□□ -0.83
UBXN11-201ENST00000314675 UQCR11O14957 56 aa9.83□□□□□ -0.84
UBXN11-201ENST00000314675 MIR22HGQ0VDD5 57 aa9.8□□□□□ -0.84
UBXN11-201ENST00000314675 A0A1B0GU33 70 aa9.73□□□□□ -0.85
UBXN11-201ENST00000314675 ADM2Q7Z4H4 148 aa9.72□□□□□ -0.85
UBXN11-201ENST00000314675 PRAC1Q96KF2 57 aa9.72□□□□□ -0.85
UBXN11-201ENST00000314675 CSAG1Q6PB30 78 aa9.72□□□□□ -0.85
UBXN11-201ENST00000314675 KRTAP19-2Q3LHN2 52 aa9.71□□□□□ -0.85
UBXN11-201ENST00000314675 KRTAP10-6P60371 365 aaPredicted RBP9.7□□□□□ -0.86
UBXN11-201ENST00000314675 KRTAP3-2Q9BYR7 98 aa9.69□□□□□ -0.86
UBXN11-201ENST00000314675 H0YAA0 97 aa9.64□□□□□ -0.87
UBXN11-201ENST00000314675 UBR4Q5T4S7 5183 aa9.6□□□□□ -0.87
UBXN11-201ENST00000314675 P0C880 135 aa9.6□□□□□ -0.87
UBXN11-201ENST00000314675 RNF213Q63HN8 5207 aa9.52□□□□□ -0.89
UBXN11-201ENST00000314675 FLGP20930 4061 aaPredicted RBP9.52□□□□□ -0.89
UBXN11-201ENST00000314675 KRTAP13-4Q3LI77 160 aa9.49□□□□□ -0.89
UBXN11-201ENST00000314675 FAT4Q6V0I7 4981 aa9.45□□□□□ -0.9
UBXN11-201ENST00000314675 LINC01554Q52M75 96 aa9.43□□□□□ -0.9
UBXN11-201ENST00000314675 LCE2CQ5TA81 110 aa9.39□□□□□ -0.91
UBXN11-201ENST00000314675 A0A0D9SG42 100 aa9.34□□□□□ -0.91
UBXN11-201ENST00000314675 M0QZ58 72 aa9.3□□□□□ -0.92
UBXN11-201ENST00000314675 LORP23490 312 aaPredicted RBP9.25□□□□□ -0.93
UBXN11-201ENST00000314675 R4GN34 69 aa9.23□□□□□ -0.93
UBXN11-201ENST00000314675 K7ERS5 55 aa9.21□□□□□ -0.93
UBXN11-201ENST00000314675 MT1HP80294 61 aa9.17□□□□□ -0.94
UBXN11-201ENST00000314675 KRTAP25-1Q3LHN0 102 aa9.15□□□□□ -0.95
UBXN11-201ENST00000314675 KRTAP12-2P59991 146 aa9.13□□□□□ -0.95
UBXN11-201ENST00000314675 M0R2T5 61 aa9.12□□□□□ -0.95
UBXN11-201ENST00000314675 KRTAP12-1P59990 96 aa9.11□□□□□ -0.95
UBXN11-201ENST00000314675 SPINT4Q6UDR6 99 aa9.08□□□□□ -0.96
UBXN11-201ENST00000314675 CRIPTQ9P021 101 aa9.01□□□□□ -0.97
UBXN11-201ENST00000314675 ROMO1P60602 79 aa8.94□□□□□ -0.98
UBXN11-201ENST00000314675 KRTAP9-8Q9BYQ0 159 aa8.88□□□□□ -0.99
UBXN11-201ENST00000314675 MT2AP02795 61 aa8.86□□□□□ -0.99
UBXN11-201ENST00000314675 MT1FP04733 61 aa8.84□□□□□ -0.99
UBXN11-201ENST00000314675 KRTAP10-10P60014 251 aa8.82□□□□□ -1
UBXN11-201ENST00000314675 SPRR2GQ9BYE4 73 aa8.79□□□□□ -1
UBXN11-201ENST00000314675 KRTAP19-1Q8IUB9 90 aa8.78□□□□□ -1
UBXN11-201ENST00000314675 H3BS24 57 aa8.71□□□□□ -1.02
UBXN11-201ENST00000314675 C10orf95Q9H7T3 257 aa8.68□□□□□ -1.02
UBXN11-201ENST00000314675 CAMK2N1Q7Z7J9 78 aa8.67□□□□□ -1.02
UBXN11-201ENST00000314675 LCE2AQ5TA79 106 aaPredicted RBP8.63□□□□□ -1.03
UBXN11-201ENST00000314675 PLAC4Q8WY50 150 aa8.55□□□□□ -1.04
UBXN11-201ENST00000314675 KRTAP9-3Q9BYQ3 159 aa8.54□□□□□ -1.04
UBXN11-201ENST00000314675 KRTAP19-8Q3LI54 63 aa8.5□□□□□ -1.05
UBXN11-201ENST00000314675 MT1BP07438 61 aa8.41□□□□□ -1.06
UBXN11-201ENST00000314675 KRTAP15-1Q3LI76 137 aa8.4□□□□□ -1.07
UBXN11-201ENST00000314675 LCE2BO14633 110 aa8.29□□□□□ -1.08
UBXN11-201ENST00000314675 TNP1P09430 55 aa8.26□□□□□ -1.09
UBXN11-201ENST00000314675 USH2AO75445 5202 aa8.21□□□□□ -1.1
UBXN11-201ENST00000314675 KRTAP10-5P60370 271 aa8.2□□□□□ -1.1
UBXN11-201ENST00000314675 MT1XP80297 61 aa8.2□□□□□ -1.1
UBXN11-201ENST00000314675 NDUFAF8A1L188 74 aa8.19□□□□□ -1.1
UBXN11-201ENST00000314675 PP632Q6XCG6 107 aa8.12□□□□□ -1.11
UBXN11-201ENST00000314675 KRTAP23-1A1A580 65 aa8.03□□□□□ -1.12
UBXN11-201ENST00000314675 PRO2289Q9P1D8 64 aa8.02□□□□□ -1.13
UBXN11-201ENST00000314675 KRTAP10-7P60409 375 aaPredicted RBP7.91□□□□□ -1.14
UBXN11-201ENST00000314675 LCE3AQ5TA76 89 aa7.91□□□□□ -1.14
UBXN11-201ENST00000314675 FSIP2Q5CZC0 6907 aa7.88□□□□□ -1.15
UBXN11-201ENST00000314675 KRTAP10-12P60413 245 aa7.83□□□□□ -1.16
UBXN11-201ENST00000314675 SSPOA2VEC9 5147 aa7.82□□□□□ -1.16
UBXN11-201ENST00000314675 KRTAP8-1Q8IUC2 63 aa7.73□□□□□ -1.17
UBXN11-201ENST00000314675 KMT2DO14686 5537 aa7.7□□□□□ -1.18
UBXN11-201ENST00000314675 LCE2DQ5TA82 110 aaPredicted RBP7.68□□□□□ -1.18
UBXN11-201ENST00000314675 KRTAP19-6Q3LI70 58 aa7.66□□□□□ -1.18
UBXN11-201ENST00000314675 KRTAP4-8A0A0G2JLE6 195 aa7.58□□□□□ -1.2
UBXN11-201ENST00000314675 KRTAP12-3P60328 96 aa7.58□□□□□ -1.2
UBXN11-201ENST00000314675 KRTAP4-8Q9BYQ9 185 aa7.58□□□□□ -1.2
UBXN11-201ENST00000314675 LUZP6Q538Z0 58 aa7.55□□□□□ -1.2
UBXN11-201ENST00000314675 KRTAP19-5Q3LI72 72 aa7.47□□□□□ -1.21
UBXN11-201ENST00000314675 SPRR5A0A1B0GTR4 108 aa7.43□□□□□ -1.22
UBXN11-201ENST00000314675 FCGBPQ9Y6R7 5405 aaPredicted RBP7.42□□□□□ -1.22
UBXN11-201ENST00000314675 KRTAP19-7Q3SYF9 63 aa7.32□□□□□ -1.24
UBXN11-201ENST00000314675 KRTAP9-2Q9BYQ4 174 aa7.31□□□□□ -1.24
UBXN11-201ENST00000314675 A0A0A0MQY5 61 aa7.23□□□□□ -1.25
UBXN11-201ENST00000314675 MT1EP04732 61 aa7.15□□□□□ -1.26
UBXN11-201ENST00000314675 LCE3CQ5T5A8 94 aa7.1□□□□□ -1.27
UBXN11-201ENST00000314675 MACF1Q9UPN3 7388 aaKnown RBP7.09□□□□□ -1.27
UBXN11-201ENST00000314675 CRCT1Q9UGL9 99 aa7.08□□□□□ -1.28
UBXN11-201ENST00000314675 MT1LQ93083 61 aa7.04□□□□□ -1.28
UBXN11-201ENST00000314675 MUC12Q9UKN1 5478 aa7.01□□□□□ -1.29
UBXN11-201ENST00000314675 KRTAP4-7Q9BYR0 210 aa6.96□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 89.1 ms