RNA–Protein interactions for RNA: ENST00000312734.8

CGREF1-202, Transcript of cell growth regulator with EF-hand domain 1, humanhuman

APPRIS P2 TSL 5 BASIC

Gene CGREF1, Length 1,610 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CGREF1-202ENST00000312734 PCP4P48539 62 aa13.23□□□□□ -0.29
CGREF1-202ENST00000312734 KRTAP3-3Q9BYR6 98 aa13.14□□□□□ -0.31
CGREF1-202ENST00000312734 CSAG1Q6PB30 78 aa13.07□□□□□ -0.32
CGREF1-202ENST00000312734 KRTAP10-6P60371 365 aaPredicted RBP13.06□□□□□ -0.32
CGREF1-202ENST00000312734 CHKB-CPT1BH3BT56 60 aa13.02□□□□□ -0.32
CGREF1-202ENST00000312734 TMEM258P61165 79 aa13.01□□□□□ -0.33
CGREF1-202ENST00000312734 LORP23490 312 aaPredicted RBP12.99□□□□□ -0.33
CGREF1-202ENST00000312734 COA5Q86WW8 74 aa12.99□□□□□ -0.33
CGREF1-202ENST00000312734 ATP5EP56381 51 aaPredicted RBP12.96□□□□□ -0.33
CGREF1-202ENST00000312734 KRTAP9-8Q9BYQ0 159 aa12.88□□□□□ -0.35
CGREF1-202ENST00000312734 SPTSSBQ8NFR3 76 aa12.85□□□□□ -0.35
CGREF1-202ENST00000312734 MT2AP02795 61 aa12.8□□□□□ -0.36
CGREF1-202ENST00000312734 MT1FP04733 61 aa12.71□□□□□ -0.37
CGREF1-202ENST00000312734 KRTAP10-10P60014 251 aa12.71□□□□□ -0.37
CGREF1-202ENST00000312734 ADM2Q7Z4H4 148 aa12.66□□□□□ -0.38
CGREF1-202ENST00000312734 H0YAA0 97 aa12.64□□□□□ -0.39
CGREF1-202ENST00000312734 SERP1Q9Y6X1 66 aa12.62□□□□□ -0.39
CGREF1-202ENST00000312734 KRTAP3-2Q9BYR7 98 aa12.52□□□□□ -0.4
CGREF1-202ENST00000312734 P0C880 135 aa12.5□□□□□ -0.41
CGREF1-202ENST00000312734 KRTAP9-3Q9BYQ3 159 aa12.44□□□□□ -0.42
CGREF1-202ENST00000312734 SEC61GP60059 68 aa12.39□□□□□ -0.43
CGREF1-202ENST00000312734 LCE2DQ5TA82 110 aaPredicted RBP12.32□□□□□ -0.44
CGREF1-202ENST00000312734 CRIPTQ9P021 101 aa12.32□□□□□ -0.44
CGREF1-202ENST00000312734 A0A1B0GU69 56 aa12.3□□□□□ -0.44
CGREF1-202ENST00000312734 RPS28P62857 69 aaKnown RBP12.3□□□□□ -0.44
CGREF1-202ENST00000312734 LINC01558Q9Y6Z2 57 aa12.27□□□□□ -0.44
CGREF1-202ENST00000312734 KRTAP19-1Q8IUB9 90 aa12.26□□□□□ -0.45
CGREF1-202ENST00000312734 R4GN34 69 aa12.24□□□□□ -0.45
CGREF1-202ENST00000312734 SPRR2GQ9BYE4 73 aa12.22□□□□□ -0.45
CGREF1-202ENST00000312734 SMIM26A0A096LP01 95 aa12.21□□□□□ -0.46
CGREF1-202ENST00000312734 M0QZ58 72 aa12.2□□□□□ -0.46
CGREF1-202ENST00000312734 LCE2BO14633 110 aa12.2□□□□□ -0.46
CGREF1-202ENST00000312734 KRTAP9-2Q9BYQ4 174 aa12.19□□□□□ -0.46
CGREF1-202ENST00000312734 PRR15LQ9BU68 103 aa12.16□□□□□ -0.46
CGREF1-202ENST00000312734 A0A1B0GU33 70 aa12.11□□□□□ -0.47
CGREF1-202ENST00000312734 V9GYY9 64 aa12.11□□□□□ -0.47
CGREF1-202ENST00000312734 Q1T7F1 81 aa12.1□□□□□ -0.47
CGREF1-202ENST00000312734 KRTAP13-4Q3LI77 160 aa12.05□□□□□ -0.48
CGREF1-202ENST00000312734 LINC01554Q52M75 96 aa12.03□□□□□ -0.48
CGREF1-202ENST00000312734 PSPHP1O15172 72 aa12□□□□□ -0.49
CGREF1-202ENST00000312734 KRTAP19-8Q3LI54 63 aa11.99□□□□□ -0.49
CGREF1-202ENST00000312734 SPATA8Q6RVD6 105 aa11.98□□□□□ -0.49
CGREF1-202ENST00000312734 USH2AO75445 5202 aa11.95□□□□□ -0.5
CGREF1-202ENST00000312734 Q5VV11 94 aa11.93□□□□□ -0.5
CGREF1-202ENST00000312734 MT1BP07438 61 aa11.89□□□□□ -0.51
CGREF1-202ENST00000312734 FSIP2Q5CZC0 6907 aa11.88□□□□□ -0.51
CGREF1-202ENST00000312734 A0A0D9SG42 100 aa11.82□□□□□ -0.52
CGREF1-202ENST00000312734 UQCR11O14957 56 aa11.8□□□□□ -0.52
CGREF1-202ENST00000312734 PLAC4Q8WY50 150 aa11.74□□□□□ -0.53
CGREF1-202ENST00000312734 A8MU10 97 aa11.72□□□□□ -0.53
CGREF1-202ENST00000312734 SSPOA2VEC9 5147 aa11.68□□□□□ -0.54
CGREF1-202ENST00000312734 A6NN06 94 aa11.67□□□□□ -0.54
CGREF1-202ENST00000312734 CRCT1Q9UGL9 99 aa11.66□□□□□ -0.54
CGREF1-202ENST00000312734 MIR22HGQ0VDD5 57 aa11.64□□□□□ -0.55
CGREF1-202ENST00000312734 A6NED7 52 aa11.61□□□□□ -0.55
CGREF1-202ENST00000312734 SPINT4Q6UDR6 99 aa11.59□□□□□ -0.55
CGREF1-202ENST00000312734 KRTAP19-6Q3LI70 58 aa11.56□□□□□ -0.56
CGREF1-202ENST00000312734 KRTAP12-1P59990 96 aa11.54□□□□□ -0.56
CGREF1-202ENST00000312734 KRTAP12-2P59991 146 aa11.5□□□□□ -0.57
CGREF1-202ENST00000312734 KRTAP9-6A0A140TA67 174 aa11.45□□□□□ -0.58
CGREF1-202ENST00000312734 KRTAP10-5P60370 271 aa11.41□□□□□ -0.58
CGREF1-202ENST00000312734 CAMK2N1Q7Z7J9 78 aa11.41□□□□□ -0.58
CGREF1-202ENST00000312734 MT1XP80297 61 aa11.38□□□□□ -0.59
CGREF1-202ENST00000312734 PRO2289Q9P1D8 64 aa11.33□□□□□ -0.6
CGREF1-202ENST00000312734 FCGBPQ9Y6R7 5405 aaPredicted RBP11.28□□□□□ -0.6
CGREF1-202ENST00000312734 CDC42SE1Q9NRR8 79 aa11.27□□□□□ -0.6
CGREF1-202ENST00000312734 K7ERS5 55 aa11.2□□□□□ -0.62
CGREF1-202ENST00000312734 BRK1Q8WUW1 75 aa11.06□□□□□ -0.64
CGREF1-202ENST00000312734 C10orf95Q9H7T3 257 aa10.97□□□□□ -0.65
CGREF1-202ENST00000312734 KRTAP10-7P60409 375 aaPredicted RBP10.92□□□□□ -0.66
CGREF1-202ENST00000312734 KRTAP9-1A8MXZ3 250 aaPredicted RBP10.81□□□□□ -0.68
CGREF1-202ENST00000312734 MACF1Q9UPN3 7388 aaKnown RBP10.79□□□□□ -0.68
CGREF1-202ENST00000312734 KRTAP10-12P60413 245 aa10.79□□□□□ -0.68
CGREF1-202ENST00000312734 TNP1P09430 55 aa10.73□□□□□ -0.69
CGREF1-202ENST00000312734 KRTAP4-8A0A0G2JLE6 195 aa10.67□□□□□ -0.7
CGREF1-202ENST00000312734 KRTAP4-8Q9BYQ9 185 aa10.67□□□□□ -0.7
CGREF1-202ENST00000312734 KMT2DO14686 5537 aa10.65□□□□□ -0.7
CGREF1-202ENST00000312734 ROMO1P60602 79 aa10.65□□□□□ -0.7
CGREF1-202ENST00000312734 SYNE2Q8WXH0 6885 aaKnown RBP10.56□□□□□ -0.72
CGREF1-202ENST00000312734 KRTAP25-1Q3LHN0 102 aa10.55□□□□□ -0.72
CGREF1-202ENST00000312734 KRTAP8-1Q8IUC2 63 aa10.51□□□□□ -0.73
CGREF1-202ENST00000312734 PRO0628Q9UI54 55 aa10.45□□□□□ -0.74
CGREF1-202ENST00000312734 PMAIP1Q13794 54 aa10.44□□□□□ -0.74
CGREF1-202ENST00000312734 KRTAP9-7A8MTY7 169 aa10.41□□□□□ -0.74
CGREF1-202ENST00000312734 LCE3AQ5TA76 89 aa10.4□□□□□ -0.74
CGREF1-202ENST00000312734 KRTAP6-3Q3LI67 103 aa10.37□□□□□ -0.75
CGREF1-202ENST00000312734 KRTAP5-9P26371 169 aa10.26□□□□□ -0.77
CGREF1-202ENST00000312734 SPRR2FQ96RM1 72 aa10.26□□□□□ -0.77
CGREF1-202ENST00000312734 KRTAP19-5Q3LI72 72 aa10.18□□□□□ -0.78
CGREF1-202ENST00000312734 KRTAP19-7Q3SYF9 63 aa10.15□□□□□ -0.78
CGREF1-202ENST00000312734 KRTAP23-1A1A580 65 aa10.15□□□□□ -0.79
CGREF1-202ENST00000312734 PP632Q6XCG6 107 aa10.03□□□□□ -0.8
CGREF1-202ENST00000312734 MUC12Q9UKN1 5478 aa10.02□□□□□ -0.81
CGREF1-202ENST00000312734 MT1EP04732 61 aa10.01□□□□□ -0.81
CGREF1-202ENST00000312734 KRTAP12-3P60328 96 aa9.99□□□□□ -0.81
CGREF1-202ENST00000312734 SPRR2EP22531 72 aa9.89□□□□□ -0.83
CGREF1-202ENST00000312734 SPRR2BP35325 72 aa9.89□□□□□ -0.83
CGREF1-202ENST00000312734 SPRR2AP35326 72 aa9.89□□□□□ -0.83
CGREF1-202ENST00000312734 MDN1Q9NU22 5596 aa9.88□□□□□ -0.83
CGREF1-202ENST00000312734 LCE1AQ5T7P2 110 aa9.86□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 99 ms