RNA–Protein interactions for RNA: ENST00000311943.11

SCFD1-201, Transcript of sec1 family domain containing 1, humanhuman

TSL 2

Gene SCFD1, Length 2,016 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-201ENST00000311943 FCGBPQ9Y6R7 5405 aaPredicted RBP5.55□□□□□ -1.52
SCFD1-201ENST00000311943 ATOX1O00244 68 aa5.52□□□□□ -1.53
SCFD1-201ENST00000311943 SCGB1A1P11684 91 aa5.51□□□□□ -1.53
SCFD1-201ENST00000311943 CSAG1Q6PB30 78 aa5.51□□□□□ -1.53
SCFD1-201ENST00000311943 K7ERU9 68 aa5.5□□□□□ -1.53
SCFD1-201ENST00000311943 FAM236AA0A1B0GUQ0 79 aa5.48□□□□□ -1.53
SCFD1-201ENST00000311943 FAM236BA0A1B0GV22 79 aa5.48□□□□□ -1.53
SCFD1-201ENST00000311943 MP68P56378 58 aa5.48□□□□□ -1.53
SCFD1-201ENST00000311943 IMUPQ9GZP8 106 aa5.43□□□□□ -1.54
SCFD1-201ENST00000311943 MACF1Q9UPN3 7388 aaKnown RBP5.41□□□□□ -1.54
SCFD1-201ENST00000311943 KRTAP9-1A8MXZ3 250 aaPredicted RBP5.4□□□□□ -1.54
SCFD1-201ENST00000311943 MT1BP07438 61 aa5.4□□□□□ -1.54
SCFD1-201ENST00000311943 KRTAP19-6Q3LI70 58 aa5.4□□□□□ -1.55
SCFD1-201ENST00000311943 SYNE2Q8WXH0 6885 aaKnown RBP5.39□□□□□ -1.55
SCFD1-201ENST00000311943 NDUFC1O43677 76 aa5.38□□□□□ -1.55
SCFD1-201ENST00000311943 SNURFQ9Y675 71 aa5.38□□□□□ -1.55
SCFD1-201ENST00000311943 SPRR2GQ9BYE4 73 aa5.37□□□□□ -1.55
SCFD1-201ENST00000311943 TRAV7A0A075B6U4 112 aa5.36□□□□□ -1.55
SCFD1-201ENST00000311943 H3BPC8 53 aa5.36□□□□□ -1.55
SCFD1-201ENST00000311943 A8MUN3 132 aa5.35□□□□□ -1.55
SCFD1-201ENST00000311943 ADM2Q7Z4H4 148 aa5.35□□□□□ -1.55
SCFD1-201ENST00000311943 DMAC1Q96GE9 116 aa5.35□□□□□ -1.55
SCFD1-201ENST00000311943 KRTAP19-8Q3LI54 63 aa5.31□□□□□ -1.56
SCFD1-201ENST00000311943 P0C880 135 aa5.31□□□□□ -1.56
SCFD1-201ENST00000311943 KRTAP4-8Q9BYQ9 185 aa5.31□□□□□ -1.56
SCFD1-201ENST00000311943 C20orf197Q8N268 126 aa5.29□□□□□ -1.56
SCFD1-201ENST00000311943 KRTAP9-7A8MTY7 169 aa5.28□□□□□ -1.56
SCFD1-201ENST00000311943 Q5VV11 94 aa5.28□□□□□ -1.56
SCFD1-201ENST00000311943 H0YAA0 97 aa5.26□□□□□ -1.57
SCFD1-201ENST00000311943 SMIM20Q8N5G0 67 aa5.26□□□□□ -1.57
SCFD1-201ENST00000311943 SERP2Q8N6R1 65 aa5.24□□□□□ -1.57
SCFD1-201ENST00000311943 CYSTM1Q9H1C7 97 aa5.23□□□□□ -1.57
SCFD1-201ENST00000311943 A6NN06 94 aa5.2□□□□□ -1.58
SCFD1-201ENST00000311943 ACYP2P14621 99 aa5.2□□□□□ -1.58
SCFD1-201ENST00000311943 CRIPTQ9P021 101 aa5.19□□□□□ -1.58
SCFD1-201ENST00000311943 KRTAP10-5P60370 271 aa5.17□□□□□ -1.58
SCFD1-201ENST00000311943 M0QZ58 72 aa5.14□□□□□ -1.59
SCFD1-201ENST00000311943 LINC01554Q52M75 96 aa5.13□□□□□ -1.59
SCFD1-201ENST00000311943 R4GN34 69 aa5.13□□□□□ -1.59
SCFD1-201ENST00000311943 KRTAP23-1A1A580 65 aa5.13□□□□□ -1.59
SCFD1-201ENST00000311943 COX7CP15954 63 aa5.13□□□□□ -1.59
SCFD1-201ENST00000311943 KMT2DO14686 5537 aa5.12□□□□□ -1.59
SCFD1-201ENST00000311943 CHKB-CPT1BH3BT56 60 aa5.12□□□□□ -1.59
SCFD1-201ENST00000311943 PCP4P48539 62 aa5.11□□□□□ -1.59
SCFD1-201ENST00000311943 SPANXA2-OT1Q8N9U9 137 aa5.11□□□□□ -1.59
SCFD1-201ENST00000311943 MT1XP80297 61 aa5.09□□□□□ -1.6
SCFD1-201ENST00000311943 H7BZZ5 65 aa5.07□□□□□ -1.6
SCFD1-201ENST00000311943 COA5Q86WW8 74 aa5.06□□□□□ -1.6
SCFD1-201ENST00000311943 KRTAP13-4Q3LI77 160 aa5.05□□□□□ -1.6
SCFD1-201ENST00000311943 MUC12Q9UKN1 5478 aa5.03□□□□□ -1.6
SCFD1-201ENST00000311943 CCDC179H3BU77 68 aa5.02□□□□□ -1.61
SCFD1-201ENST00000311943 ANAPC13Q9BS18 74 aa5.02□□□□□ -1.61
SCFD1-201ENST00000311943 A0A0A0MQY5 61 aa5.02□□□□□ -1.61
SCFD1-201ENST00000311943 KRTAP6-3Q3LI67 103 aa5.01□□□□□ -1.61
SCFD1-201ENST00000311943 LCE3BQ5TA77 95 aa5.01□□□□□ -1.61
SCFD1-201ENST00000311943 PLAC4Q8WY50 150 aa5.01□□□□□ -1.61
SCFD1-201ENST00000311943 SPTSSBQ8NFR3 76 aa5.01□□□□□ -1.61
SCFD1-201ENST00000311943 KRTAP4-12Q9BQ66 201 aa4.96□□□□□ -1.62
SCFD1-201ENST00000311943 KRTAP4-8A0A0G2JLE6 195 aa4.93□□□□□ -1.62
SCFD1-201ENST00000311943 KRTAP10-7P60409 375 aaPredicted RBP4.9□□□□□ -1.62
SCFD1-201ENST00000311943 SPATA8Q6RVD6 105 aa4.9□□□□□ -1.62
SCFD1-201ENST00000311943 KRTAP9-9Q9BYP9 154 aa4.9□□□□□ -1.63
SCFD1-201ENST00000311943 KRTAP9-4Q9BYQ2 154 aa4.9□□□□□ -1.63
SCFD1-201ENST00000311943 PRO2289Q9P1D8 64 aa4.9□□□□□ -1.63
SCFD1-201ENST00000311943 NEBP20929 6669 aa4.89□□□□□ -1.63
SCFD1-201ENST00000311943 MDN1Q9NU22 5596 aa4.89□□□□□ -1.63
SCFD1-201ENST00000311943 A0A0D9SG42 100 aa4.86□□□□□ -1.63
SCFD1-201ENST00000311943 KRTAP5-9P26371 169 aa4.86□□□□□ -1.63
SCFD1-201ENST00000311943 SERP1Q9Y6X1 66 aa4.81□□□□□ -1.64
SCFD1-201ENST00000311943 KRTAP12-2P59991 146 aa4.8□□□□□ -1.64
SCFD1-201ENST00000311943 SPRR2FQ96RM1 72 aa4.8□□□□□ -1.64
SCFD1-201ENST00000311943 A0A1B0GU33 70 aa4.8□□□□□ -1.64
SCFD1-201ENST00000311943 KRTAP8-1Q8IUC2 63 aa4.79□□□□□ -1.64
SCFD1-201ENST00000311943 KRTAP4-7Q9BYR0 210 aa4.79□□□□□ -1.64
SCFD1-201ENST00000311943 SEC61GP60059 68 aa4.79□□□□□ -1.64
SCFD1-201ENST00000311943 A8MU10 97 aa4.77□□□□□ -1.65
SCFD1-201ENST00000311943 KRTAP10-12P60413 245 aa4.77□□□□□ -1.65
SCFD1-201ENST00000311943 A0A1B0GU69 56 aa4.75□□□□□ -1.65
SCFD1-201ENST00000311943 SPINT4Q6UDR6 99 aa4.75□□□□□ -1.65
SCFD1-201ENST00000311943 CAMK2N1Q7Z7J9 78 aa4.74□□□□□ -1.65
SCFD1-201ENST00000311943 KRTAP12-1P59990 96 aa4.73□□□□□ -1.65
SCFD1-201ENST00000311943 LCE1DQ5T752 114 aa4.72□□□□□ -1.65
SCFD1-201ENST00000311943 KRTAP19-4Q3LI73 84 aa4.7□□□□□ -1.66
SCFD1-201ENST00000311943 SPRR2EP22531 72 aa4.69□□□□□ -1.66
SCFD1-201ENST00000311943 SPRR2BP35325 72 aa4.69□□□□□ -1.66
SCFD1-201ENST00000311943 SPRR2AP35326 72 aa4.69□□□□□ -1.66
SCFD1-201ENST00000311943 TMEM258P61165 79 aa4.67□□□□□ -1.66
SCFD1-201ENST00000311943 LCE1AQ5T7P2 110 aa4.67□□□□□ -1.66
SCFD1-201ENST00000311943 ATP5EP56381 51 aaPredicted RBP4.66□□□□□ -1.66
SCFD1-201ENST00000311943 LINC01558Q9Y6Z2 57 aa4.63□□□□□ -1.67
SCFD1-201ENST00000311943 KRTAP4-9Q9BYQ8 210 aa4.62□□□□□ -1.67
SCFD1-201ENST00000311943 KRTAP20-1Q3LI63 56 aa4.6□□□□□ -1.67
SCFD1-201ENST00000311943 SMIM26A0A096LP01 95 aa4.56□□□□□ -1.68
SCFD1-201ENST00000311943 KRTAP19-7Q3SYF9 63 aa4.56□□□□□ -1.68
SCFD1-201ENST00000311943 C10orf95Q9H7T3 257 aa4.55□□□□□ -1.68
SCFD1-201ENST00000311943 PRR15LQ9BU68 103 aa4.55□□□□□ -1.68
SCFD1-201ENST00000311943 KRTAP4-2Q9BYR5 136 aa4.55□□□□□ -1.68
SCFD1-201ENST00000311943 LCE4AQ5TA78 99 aa4.54□□□□□ -1.68
SCFD1-201ENST00000311943 SPRR2DP22532 72 aa4.51□□□□□ -1.69
SCFD1-201ENST00000311943 PSPHP1O15172 72 aa4.5□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 64.9 ms