RNA–Protein interactions for RNA: ENST00000309052.8

LCLAT1-201, Transcript of lysocardiolipin acyltransferase 1, humanhuman

TSL 1 (best) BASIC

Gene LCLAT1, Length 5,060 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LCLAT1-201ENST00000309052 A8MU10 97 aa4.49□□□□□ -1.69
LCLAT1-201ENST00000309052 BIRC6Q9NR09 4857 aa4.49□□□□□ -1.69
LCLAT1-201ENST00000309052 RBM12B-AS1Q9P1G2 102 aa4.46□□□□□ -1.69
LCLAT1-201ENST00000309052 TNXBP22105 4242 aa4.45□□□□□ -1.7
LCLAT1-201ENST00000309052 SEC61BP60468 96 aaKnown RBP4.44□□□□□ -1.7
LCLAT1-201ENST00000309052 TPRXLQ17RH7 258 aa4.43□□□□□ -1.7
LCLAT1-201ENST00000309052 A0A0D9SG42 100 aa4.43□□□□□ -1.7
LCLAT1-201ENST00000309052 LINC01554Q52M75 96 aa4.43□□□□□ -1.7
LCLAT1-201ENST00000309052 KRTAP3-1Q9BYR8 98 aa4.42□□□□□ -1.7
LCLAT1-201ENST00000309052 Q5VV11 94 aa4.42□□□□□ -1.7
LCLAT1-201ENST00000309052 Q1T7F1 81 aa4.4□□□□□ -1.7
LCLAT1-201ENST00000309052 S4R3F8 94 aa4.4□□□□□ -1.7
LCLAT1-201ENST00000309052 UBR4Q5T4S7 5183 aa4.39□□□□□ -1.71
LCLAT1-201ENST00000309052 LCA10Q71F78 164 aa4.39□□□□□ -1.71
LCLAT1-201ENST00000309052 M0R2T5 61 aa4.38□□□□□ -1.71
LCLAT1-201ENST00000309052 SPATA8Q6RVD6 105 aa4.38□□□□□ -1.71
LCLAT1-201ENST00000309052 LINC01558Q9Y6Z2 57 aa4.36□□□□□ -1.71
LCLAT1-201ENST00000309052 FAT4Q6V0I7 4981 aa4.34□□□□□ -1.72
LCLAT1-201ENST00000309052 UQCR11O14957 56 aa4.33□□□□□ -1.72
LCLAT1-201ENST00000309052 CSAG1Q6PB30 78 aa4.33□□□□□ -1.72
LCLAT1-201ENST00000309052 H1FX-AS1Q4G0G2 97 aa4.33□□□□□ -1.72
LCLAT1-201ENST00000309052 MIR22HGQ0VDD5 57 aa4.32□□□□□ -1.72
LCLAT1-201ENST00000309052 A0A1B0GU33 70 aa4.32□□□□□ -1.72
LCLAT1-201ENST00000309052 KRTAP4-1Q9BYQ7 146 aa4.31□□□□□ -1.72
LCLAT1-201ENST00000309052 ADM2Q7Z4H4 148 aa4.31□□□□□ -1.72
LCLAT1-201ENST00000309052 SPINT4Q6UDR6 99 aa4.29□□□□□ -1.72
LCLAT1-201ENST00000309052 P0C880 135 aa4.28□□□□□ -1.72
LCLAT1-201ENST00000309052 CRIPTQ9P021 101 aa4.23□□□□□ -1.73
LCLAT1-201ENST00000309052 CDC42SE1Q9NRR8 79 aa4.22□□□□□ -1.73
LCLAT1-201ENST00000309052 R4GN34 69 aa4.22□□□□□ -1.73
LCLAT1-201ENST00000309052 M0QZ58 72 aa4.21□□□□□ -1.74
LCLAT1-201ENST00000309052 KRTAP3-3Q9BYR6 98 aa4.2□□□□□ -1.74
LCLAT1-201ENST00000309052 HMCN2Q8NDA2 5059 aa4.19□□□□□ -1.74
LCLAT1-201ENST00000309052 KTN1-AS1Q86SY8 53 aa4.18□□□□□ -1.74
LCLAT1-201ENST00000309052 H0YAA0 97 aa4.17□□□□□ -1.74
LCLAT1-201ENST00000309052 PRAC1Q96KF2 57 aa4.15□□□□□ -1.75
LCLAT1-201ENST00000309052 FSIP2Q5CZC0 6907 aa4.14□□□□□ -1.75
LCLAT1-201ENST00000309052 KRTAP13-4Q3LI77 160 aa4.13□□□□□ -1.75
LCLAT1-201ENST00000309052 KRTAP10-6P60371 365 aaPredicted RBP4.11□□□□□ -1.75
LCLAT1-201ENST00000309052 LORP23490 312 aaPredicted RBP4.09□□□□□ -1.75
LCLAT1-201ENST00000309052 KRTAP3-2Q9BYR7 98 aa4.07□□□□□ -1.76
LCLAT1-201ENST00000309052 CAMK2N1Q7Z7J9 78 aa4.07□□□□□ -1.76
LCLAT1-201ENST00000309052 KRTAP10-10P60014 251 aa4.05□□□□□ -1.76
LCLAT1-201ENST00000309052 MUC17Q685J3 4493 aa4.01□□□□□ -1.77
LCLAT1-201ENST00000309052 KRTAP12-2P59991 146 aa4□□□□□ -1.77
LCLAT1-201ENST00000309052 A6NN06 94 aa3.99□□□□□ -1.77
LCLAT1-201ENST00000309052 LUZP6Q538Z0 58 aa3.99□□□□□ -1.77
LCLAT1-201ENST00000309052 C10orf95Q9H7T3 257 aa3.96□□□□□ -1.78
LCLAT1-201ENST00000309052 MT1HP80294 61 aa3.93□□□□□ -1.78
LCLAT1-201ENST00000309052 H3BS24 57 aa3.92□□□□□ -1.78
LCLAT1-201ENST00000309052 KRTAP12-1P59990 96 aa3.92□□□□□ -1.78
LCLAT1-201ENST00000309052 A0A0A0MQY5 61 aa3.91□□□□□ -1.78
LCLAT1-201ENST00000309052 KRTAP19-2Q3LHN2 52 aa3.91□□□□□ -1.78
LCLAT1-201ENST00000309052 FLGP20930 4061 aaPredicted RBP3.91□□□□□ -1.78
LCLAT1-201ENST00000309052 LCE2CQ5TA81 110 aa3.91□□□□□ -1.78
LCLAT1-201ENST00000309052 USH2AO75445 5202 aa3.91□□□□□ -1.78
LCLAT1-201ENST00000309052 ROMO1P60602 79 aa3.89□□□□□ -1.79
LCLAT1-201ENST00000309052 PLAC4Q8WY50 150 aa3.88□□□□□ -1.79
LCLAT1-201ENST00000309052 MT1FP04733 61 aa3.83□□□□□ -1.8
LCLAT1-201ENST00000309052 MT2AP02795 61 aa3.81□□□□□ -1.8
LCLAT1-201ENST00000309052 KRTAP25-1Q3LHN0 102 aa3.74□□□□□ -1.81
LCLAT1-201ENST00000309052 KRTAP9-8Q9BYQ0 159 aa3.73□□□□□ -1.81
LCLAT1-201ENST00000309052 KRTAP19-1Q8IUB9 90 aa3.71□□□□□ -1.82
LCLAT1-201ENST00000309052 TNP1P09430 55 aa3.69□□□□□ -1.82
LCLAT1-201ENST00000309052 KMT2DO14686 5537 aa3.64□□□□□ -1.83
LCLAT1-201ENST00000309052 SPRR2GQ9BYE4 73 aa3.62□□□□□ -1.83
LCLAT1-201ENST00000309052 KRTAP9-3Q9BYQ3 159 aa3.57□□□□□ -1.84
LCLAT1-201ENST00000309052 LCE2BO14633 110 aa3.57□□□□□ -1.84
LCLAT1-201ENST00000309052 LCE2AQ5TA79 106 aaPredicted RBP3.56□□□□□ -1.84
LCLAT1-201ENST00000309052 MT1BP07438 61 aa3.55□□□□□ -1.84
LCLAT1-201ENST00000309052 PRO2289Q9P1D8 64 aa3.53□□□□□ -1.84
LCLAT1-201ENST00000309052 NDUFAF8A1L188 74 aa3.5□□□□□ -1.85
LCLAT1-201ENST00000309052 LCE3AQ5TA76 89 aa3.49□□□□□ -1.85
LCLAT1-201ENST00000309052 DSTQ03001 7570 aaKnown RBP3.49□□□□□ -1.85
LCLAT1-201ENST00000309052 SSPOA2VEC9 5147 aa3.47□□□□□ -1.85
LCLAT1-201ENST00000309052 KRTAP10-7P60409 375 aaPredicted RBP3.47□□□□□ -1.85
LCLAT1-201ENST00000309052 MT1XP80297 61 aa3.47□□□□□ -1.85
LCLAT1-201ENST00000309052 KRTAP19-8Q3LI54 63 aa3.46□□□□□ -1.86
LCLAT1-201ENST00000309052 KRTAP10-5P60370 271 aa3.45□□□□□ -1.86
LCLAT1-201ENST00000309052 KRTAP10-12P60413 245 aa3.45□□□□□ -1.86
LCLAT1-201ENST00000309052 KRTAP4-8A0A0G2JLE6 195 aa3.44□□□□□ -1.86
LCLAT1-201ENST00000309052 KRTAP4-8Q9BYQ9 185 aa3.44□□□□□ -1.86
LCLAT1-201ENST00000309052 PP632Q6XCG6 107 aa3.42□□□□□ -1.86
LCLAT1-201ENST00000309052 OBSCNQ5VST9 7968 aa3.41□□□□□ -1.86
LCLAT1-201ENST00000309052 MUC12Q9UKN1 5478 aa3.36□□□□□ -1.87
LCLAT1-201ENST00000309052 KRTAP12-3P60328 96 aa3.33□□□□□ -1.88
LCLAT1-201ENST00000309052 FCGBPQ9Y6R7 5405 aaPredicted RBP3.33□□□□□ -1.88
LCLAT1-201ENST00000309052 SYNE2Q8WXH0 6885 aaKnown RBP3.32□□□□□ -1.88
LCLAT1-201ENST00000309052 MACF1Q9UPN3 7388 aaKnown RBP3.3□□□□□ -1.88
LCLAT1-201ENST00000309052 SYNE1Q8NF91 8797 aaKnown RBP3.29□□□□□ -1.88
LCLAT1-201ENST00000309052 KRTAP19-5Q3LI72 72 aa3.29□□□□□ -1.88
LCLAT1-201ENST00000309052 KRTAP15-1Q3LI76 137 aa3.28□□□□□ -1.88
LCLAT1-201ENST00000309052 KRTAP9-2Q9BYQ4 174 aa3.26□□□□□ -1.89
LCLAT1-201ENST00000309052 KRTAP8-1Q8IUC2 63 aa3.26□□□□□ -1.89
LCLAT1-201ENST00000309052 CRCT1Q9UGL9 99 aa3.23□□□□□ -1.89
LCLAT1-201ENST00000309052 KRTAP4-7Q9BYR0 210 aa3.2□□□□□ -1.9
LCLAT1-201ENST00000309052 SPRR2FQ96RM1 72 aa3.19□□□□□ -1.9
LCLAT1-201ENST00000309052 KRTAP19-6Q3LI70 58 aa3.14□□□□□ -1.91
LCLAT1-201ENST00000309052 MDN1Q9NU22 5596 aa3.12□□□□□ -1.91
LCLAT1-201ENST00000309052 KRTAP23-1A1A580 65 aa3.12□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 7.7 ms