RNA–Protein interactions for RNA: ENST00000308987.5

CKS1B-201, Transcript of CDC28 protein kinase regulatory subunit 1B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CKS1B, Length 759 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1B-201ENST00000308987 PHF5AQ7RTV0 110 aaKnown RBP2.9□□□□□ -1.95
CKS1B-201ENST00000308987 ZNF706Q9Y5V0 76 aaPredicted RBP2.9□□□□□ -1.95
CKS1B-201ENST00000308987 DEFB116Q30KQ4 102 aa2.89□□□□□ -1.95
CKS1B-201ENST00000308987 KRTAP13-3Q3SY46 172 aa2.89□□□□□ -1.95
CKS1B-201ENST00000308987 MUC17Q685J3 4493 aa2.88□□□□□ -1.95
CKS1B-201ENST00000308987 A0A0G2JQZ4 141 aa2.88□□□□□ -1.95
CKS1B-201ENST00000308987 LOC101927531A0A1B0GV80 90 aa2.88□□□□□ -1.95
CKS1B-201ENST00000308987 KRTAP11-1Q8IUC1 163 aa2.88□□□□□ -1.95
CKS1B-201ENST00000308987 CHTF8P0CG12 524 aa2.87□□□□□ -1.95
CKS1B-201ENST00000308987 SPACA4Q8TDM5 124 aa2.87□□□□□ -1.95
CKS1B-201ENST00000308987 Q96NJ1 140 aa2.87□□□□□ -1.95
CKS1B-201ENST00000308987 C8orf17Q9NRJ1 99 aa2.87□□□□□ -1.95
CKS1B-201ENST00000308987 A0A1B0GVX0 72 aa2.86□□□□□ -1.95
CKS1B-201ENST00000308987 A8MUN3 132 aa2.86□□□□□ -1.95
CKS1B-201ENST00000308987 Q5VV11 94 aa2.86□□□□□ -1.95
CKS1B-201ENST00000308987 Q75L30 129 aa2.86□□□□□ -1.95
CKS1B-201ENST00000308987 PSPHP1O15172 72 aa2.85□□□□□ -1.95
CKS1B-201ENST00000308987 CD164Q04900 197 aa2.85□□□□□ -1.95
CKS1B-201ENST00000308987 PRR4Q16378 134 aa2.85□□□□□ -1.95
CKS1B-201ENST00000308987 COA5Q86WW8 74 aa2.85□□□□□ -1.95
CKS1B-201ENST00000308987 PLAC8Q9NZF1 115 aa2.85□□□□□ -1.95
CKS1B-201ENST00000308987 LINC01558Q9Y6Z2 57 aa2.85□□□□□ -1.95
CKS1B-201ENST00000308987 PMAIP1Q13794 54 aa2.84□□□□□ -1.95
CKS1B-201ENST00000308987 ATP11AUNQ6ZP68 121 aa2.84□□□□□ -1.95
CKS1B-201ENST00000308987 MRPL34Q9BQ48 92 aaKnown RBP2.84□□□□□ -1.95
CKS1B-201ENST00000308987 C8orf87E5RJ46 101 aa2.83□□□□□ -1.96
CKS1B-201ENST00000308987 CHKB-CPT1BH3BT56 60 aa2.83□□□□□ -1.96
CKS1B-201ENST00000308987 ZNF861PO60384 105 aa2.83□□□□□ -1.96
CKS1B-201ENST00000308987 IGLV9-49A0A0B4J1Y8 123 aa2.82□□□□□ -1.96
CKS1B-201ENST00000308987 LCE3EQ5T5B0 92 aa2.82□□□□□ -1.96
CKS1B-201ENST00000308987 SSBP3-AS1Q7Z2R9 100 aa2.82□□□□□ -1.96
CKS1B-201ENST00000308987 PRR15LQ9BU68 103 aa2.82□□□□□ -1.96
CKS1B-201ENST00000308987 IGHV6-1A0A0B4J1U7 121 aa2.81□□□□□ -1.96
CKS1B-201ENST00000308987 CDC42SE1Q9NRR8 79 aa2.81□□□□□ -1.96
CKS1B-201ENST00000308987 PSORS1C2Q9UIG4 136 aa2.81□□□□□ -1.96
CKS1B-201ENST00000308987 NDUFS5O43920 106 aa2.8□□□□□ -1.96
CKS1B-201ENST00000308987 SEC61GP60059 68 aa2.8□□□□□ -1.96
CKS1B-201ENST00000308987 A6NED7 52 aa2.79□□□□□ -1.96
CKS1B-201ENST00000308987 HRES1P13985 223 aa2.79□□□□□ -1.96
CKS1B-201ENST00000308987 ACYP2P14621 99 aa2.79□□□□□ -1.96
CKS1B-201ENST00000308987 PCOTHQ58A44 107 aa2.79□□□□□ -1.96
CKS1B-201ENST00000308987 KRTAP5-5Q701N2 237 aaPredicted RBP2.79□□□□□ -1.96
CKS1B-201ENST00000308987 IGLV7-43P04211 117 aa2.78□□□□□ -1.96
CKS1B-201ENST00000308987 SEC61BP60468 96 aaKnown RBP2.78□□□□□ -1.96
CKS1B-201ENST00000308987 SPINK6Q6UWN8 80 aa2.78□□□□□ -1.96
CKS1B-201ENST00000308987 LCA10Q71F78 164 aa2.78□□□□□ -1.96
CKS1B-201ENST00000308987 KTN1-AS1Q86SY8 53 aa2.78□□□□□ -1.96
CKS1B-201ENST00000308987 DMAC1Q96GE9 116 aa2.77□□□□□ -1.97
CKS1B-201ENST00000308987 A0A087X002 238 aa2.76□□□□□ -1.97
CKS1B-201ENST00000308987 A6NN06 94 aa2.76□□□□□ -1.97
CKS1B-201ENST00000308987 SPAG11AQ6PDA7 123 aa2.76□□□□□ -1.97
CKS1B-201ENST00000308987 NOTCH2NLQ7Z3S9 236 aa2.76□□□□□ -1.97
CKS1B-201ENST00000308987 LINC00313P59037 77 aa2.75□□□□□ -1.97
CKS1B-201ENST00000308987 Q5W150 140 aa2.75□□□□□ -1.97
CKS1B-201ENST00000308987 A8MU10 97 aa2.74□□□□□ -1.97
CKS1B-201ENST00000308987 KRTAP1-4P0C5Y4 121 aa2.74□□□□□ -1.97
CKS1B-201ENST00000308987 SPTSSBQ8NFR3 76 aa2.74□□□□□ -1.97
CKS1B-201ENST00000308987 C7orf65Q6ZTY9 151 aa2.73□□□□□ -1.97
CKS1B-201ENST00000308987 ANAPC11Q9NYG5 84 aa2.73□□□□□ -1.97
CKS1B-201ENST00000308987 SPINK7P58062 85 aa2.72□□□□□ -1.97
CKS1B-201ENST00000308987 KRTAP12-2P59991 146 aa2.72□□□□□ -1.97
CKS1B-201ENST00000308987 KRTAP16-1A8MUX0 517 aa2.71□□□□□ -1.98
CKS1B-201ENST00000308987 KRTAP5-8O75690 187 aa2.71□□□□□ -1.98
CKS1B-201ENST00000308987 NDUFAF8A1L188 74 aa2.7□□□□□ -1.98
CKS1B-201ENST00000308987 RPS29P62273 56 aaKnown RBP2.7□□□□□ -1.98
CKS1B-201ENST00000308987 SPATA8Q6RVD6 105 aa2.7□□□□□ -1.98
CKS1B-201ENST00000308987 A0A1B0GU69 56 aa2.69□□□□□ -1.98
CKS1B-201ENST00000308987 KRTAP13-2Q52LG2 175 aa2.69□□□□□ -1.98
CKS1B-201ENST00000308987 RBM12B-AS1Q9P1G2 102 aa2.69□□□□□ -1.98
CKS1B-201ENST00000308987 UQCR11O14957 56 aa2.68□□□□□ -1.98
CKS1B-201ENST00000308987 SPINK1P00995 79 aa2.68□□□□□ -1.98
CKS1B-201ENST00000308987 LCE1CQ5T751 118 aa2.68□□□□□ -1.98
CKS1B-201ENST00000308987 LCE1BQ5T7P3 118 aa2.68□□□□□ -1.98
CKS1B-201ENST00000308987 FSIP2Q5CZC0 6907 aa2.68□□□□□ -1.98
CKS1B-201ENST00000308987 FLGP20930 4061 aaPredicted RBP2.65□□□□□ -1.99
CKS1B-201ENST00000308987 MIR22HGQ0VDD5 57 aa2.65□□□□□ -1.99
CKS1B-201ENST00000308987 RETNLBQ9BQ08 111 aa2.65□□□□□ -1.99
CKS1B-201ENST00000308987 KRTAP4-1Q9BYQ7 146 aa2.65□□□□□ -1.99
CKS1B-201ENST00000308987 TYMSOSQ8TAI1 123 aa2.64□□□□□ -1.99
CKS1B-201ENST00000308987 CRCT1Q9UGL9 99 aa2.64□□□□□ -1.99
CKS1B-201ENST00000308987 A8MUU9 505 aa2.61□□□□□ -1.99
CKS1B-201ENST00000308987 TPRXLQ17RH7 258 aa2.61□□□□□ -1.99
CKS1B-201ENST00000308987 LINC00304Q8N9R0 145 aa2.61□□□□□ -1.99
CKS1B-201ENST00000308987 C20orf166-AS1Q96NR2 134 aa2.6□□□□□ -1.99
CKS1B-201ENST00000308987 KRTAP19-2Q3LHN2 52 aa2.59□□□□□ -1.99
CKS1B-201ENST00000308987 LINC01554Q52M75 96 aa2.57□□□□□ -2
CKS1B-201ENST00000308987 SSPOA2VEC9 5147 aa2.55□□□□□ -2
CKS1B-201ENST00000308987 PRAC1Q96KF2 57 aa2.55□□□□□ -2
CKS1B-201ENST00000308987 A0A1B0GU33 70 aa2.54□□□□□ -2
CKS1B-201ENST00000308987 MT1HP80294 61 aa2.54□□□□□ -2
CKS1B-201ENST00000308987 H0YAA0 97 aa2.53□□□□□ -2
CKS1B-201ENST00000308987 H1FX-AS1Q4G0G2 97 aa2.53□□□□□ -2
CKS1B-201ENST00000308987 COX6B2Q6YFQ2 88 aa2.53□□□□□ -2
CKS1B-201ENST00000308987 ADM2Q7Z4H4 148 aa2.53□□□□□ -2
CKS1B-201ENST00000308987 K7ERS5 55 aa2.52□□□□□ -2.01
CKS1B-201ENST00000308987 USH2AO75445 5202 aa2.52□□□□□ -2.01
CKS1B-201ENST00000308987 CSAG1Q6PB30 78 aa2.51□□□□□ -2.01
CKS1B-201ENST00000308987 C9orf92A6NGG3 77 aa2.49□□□□□ -2.01
CKS1B-201ENST00000308987 KRTAP25-1Q3LHN0 102 aa2.49□□□□□ -2.01
CKS1B-201ENST00000308987 FCGBPQ9Y6R7 5405 aaPredicted RBP2.47□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 82.7 ms