RNA–Protein interactions for RNA: ENST00000308769.12

RFWD2-201, Transcript of E3 ubiquitin-protein ligase RFWD2, humanhuman

TSL 1 (best) BASIC

Gene RFWD2, Length 2,124 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFWD2-201ENST00000308769 HERC2O95714 4834 aa12.32□□□□□ -0.44
RFWD2-201ENST00000308769 BIRC6Q9NR09 4857 aa12.28□□□□□ -0.44
RFWD2-201ENST00000308769 J3QL48 77 aa12.28□□□□□ -0.44
RFWD2-201ENST00000308769 SEC61GP60059 68 aa12.27□□□□□ -0.45
RFWD2-201ENST00000308769 UQCR11O14957 56 aa12.23□□□□□ -0.45
RFWD2-201ENST00000308769 KRTAP3-3Q9BYR6 98 aa12.18□□□□□ -0.46
RFWD2-201ENST00000308769 PMAIP1Q13794 54 aa12.17□□□□□ -0.46
RFWD2-201ENST00000308769 MIR22HGQ0VDD5 57 aa12.16□□□□□ -0.46
RFWD2-201ENST00000308769 SPATA8Q6RVD6 105 aa12.16□□□□□ -0.46
RFWD2-201ENST00000308769 S4R3F8 94 aa12.13□□□□□ -0.47
RFWD2-201ENST00000308769 H1FX-AS1Q4G0G2 97 aa12.07□□□□□ -0.48
RFWD2-201ENST00000308769 A6NN06 94 aa12.02□□□□□ -0.48
RFWD2-201ENST00000308769 RBM12B-AS1Q9P1G2 102 aa12.02□□□□□ -0.48
RFWD2-201ENST00000308769 A0A1B0GU33 70 aa12.01□□□□□ -0.49
RFWD2-201ENST00000308769 SEC61BP60468 96 aaKnown RBP12□□□□□ -0.49
RFWD2-201ENST00000308769 H0YAA0 97 aa11.98□□□□□ -0.49
RFWD2-201ENST00000308769 KRTAP10-6P60371 365 aaPredicted RBP11.89□□□□□ -0.51
RFWD2-201ENST00000308769 MUC17Q685J3 4493 aa11.89□□□□□ -0.51
RFWD2-201ENST00000308769 KRTAP4-1Q9BYQ7 146 aa11.89□□□□□ -0.51
RFWD2-201ENST00000308769 PCLOQ9Y6V0 5065 aa11.87□□□□□ -0.51
RFWD2-201ENST00000308769 KRTAP3-2Q9BYR7 98 aa11.86□□□□□ -0.51
RFWD2-201ENST00000308769 KTN1-AS1Q86SY8 53 aa11.78□□□□□ -0.52
RFWD2-201ENST00000308769 P0C880 135 aa11.75□□□□□ -0.53
RFWD2-201ENST00000308769 CSAG1Q6PB30 78 aa11.75□□□□□ -0.53
RFWD2-201ENST00000308769 HERC1Q15751 4861 aa11.73□□□□□ -0.53
RFWD2-201ENST00000308769 ADM2Q7Z4H4 148 aa11.71□□□□□ -0.54
RFWD2-201ENST00000308769 KRTAP13-4Q3LI77 160 aa11.7□□□□□ -0.54
RFWD2-201ENST00000308769 KRTAP19-2Q3LHN2 52 aa11.6□□□□□ -0.55
RFWD2-201ENST00000308769 HMCN2Q8NDA2 5059 aa11.59□□□□□ -0.55
RFWD2-201ENST00000308769 MUC2Q02817 5179 aa11.58□□□□□ -0.56
RFWD2-201ENST00000308769 A0A0D9SG42 100 aa11.53□□□□□ -0.56
RFWD2-201ENST00000308769 PRAC1Q96KF2 57 aa11.45□□□□□ -0.58
RFWD2-201ENST00000308769 K7ERS5 55 aa11.43□□□□□ -0.58
RFWD2-201ENST00000308769 M0QZ58 72 aa11.34□□□□□ -0.59
RFWD2-201ENST00000308769 FLGP20930 4061 aaPredicted RBP11.28□□□□□ -0.6
RFWD2-201ENST00000308769 KRTAP12-2P59991 146 aa11.27□□□□□ -0.61
RFWD2-201ENST00000308769 LORP23490 312 aaPredicted RBP11.24□□□□□ -0.61
RFWD2-201ENST00000308769 R4GN34 69 aa11.23□□□□□ -0.61
RFWD2-201ENST00000308769 KRTAP12-1P59990 96 aa11.22□□□□□ -0.61
RFWD2-201ENST00000308769 SPINT4Q6UDR6 99 aa11.19□□□□□ -0.62
RFWD2-201ENST00000308769 LINC01554Q52M75 96 aa11.14□□□□□ -0.63
RFWD2-201ENST00000308769 LCE2CQ5TA81 110 aa11.12□□□□□ -0.63
RFWD2-201ENST00000308769 ROMO1P60602 79 aa11.11□□□□□ -0.63
RFWD2-201ENST00000308769 UBR4Q5T4S7 5183 aa11.1□□□□□ -0.63
RFWD2-201ENST00000308769 FAT4Q6V0I7 4981 aa11.07□□□□□ -0.64
RFWD2-201ENST00000308769 RNF213Q63HN8 5207 aa11.03□□□□□ -0.64
RFWD2-201ENST00000308769 CRIPTQ9P021 101 aa11□□□□□ -0.65
RFWD2-201ENST00000308769 KRTAP25-1Q3LHN0 102 aa10.94□□□□□ -0.66
RFWD2-201ENST00000308769 MT1HP80294 61 aa10.87□□□□□ -0.67
RFWD2-201ENST00000308769 M0R2T5 61 aa10.82□□□□□ -0.68
RFWD2-201ENST00000308769 C10orf95Q9H7T3 257 aa10.72□□□□□ -0.69
RFWD2-201ENST00000308769 CAMK2N1Q7Z7J9 78 aa10.57□□□□□ -0.72
RFWD2-201ENST00000308769 MT2AP02795 61 aa10.55□□□□□ -0.72
RFWD2-201ENST00000308769 MT1FP04733 61 aa10.54□□□□□ -0.72
RFWD2-201ENST00000308769 SPRR2GQ9BYE4 73 aa10.54□□□□□ -0.72
RFWD2-201ENST00000308769 KRTAP9-8Q9BYQ0 159 aa10.54□□□□□ -0.72
RFWD2-201ENST00000308769 KRTAP19-1Q8IUB9 90 aa10.53□□□□□ -0.72
RFWD2-201ENST00000308769 KRTAP10-10P60014 251 aa10.49□□□□□ -0.73
RFWD2-201ENST00000308769 PLAC4Q8WY50 150 aa10.29□□□□□ -0.76
RFWD2-201ENST00000308769 KRTAP19-8Q3LI54 63 aa10.16□□□□□ -0.78
RFWD2-201ENST00000308769 KRTAP9-3Q9BYQ3 159 aa10.12□□□□□ -0.79
RFWD2-201ENST00000308769 TNP1P09430 55 aa10.1□□□□□ -0.79
RFWD2-201ENST00000308769 MT1BP07438 61 aa10.07□□□□□ -0.8
RFWD2-201ENST00000308769 LCE2AQ5TA79 106 aaPredicted RBP10.04□□□□□ -0.8
RFWD2-201ENST00000308769 PP632Q6XCG6 107 aa10.01□□□□□ -0.81
RFWD2-201ENST00000308769 KRTAP10-5P60370 271 aa9.86□□□□□ -0.83
RFWD2-201ENST00000308769 MT1XP80297 61 aa9.86□□□□□ -0.83
RFWD2-201ENST00000308769 KRTAP15-1Q3LI76 137 aa9.83□□□□□ -0.84
RFWD2-201ENST00000308769 KRTAP23-1A1A580 65 aa9.83□□□□□ -0.84
RFWD2-201ENST00000308769 LCE2BO14633 110 aa9.8□□□□□ -0.84
RFWD2-201ENST00000308769 LCE3AQ5TA76 89 aa9.68□□□□□ -0.86
RFWD2-201ENST00000308769 USH2AO75445 5202 aa9.59□□□□□ -0.87
RFWD2-201ENST00000308769 PRO2289Q9P1D8 64 aa9.57□□□□□ -0.88
RFWD2-201ENST00000308769 KRTAP10-7P60409 375 aaPredicted RBP9.55□□□□□ -0.88
RFWD2-201ENST00000308769 KRTAP10-12P60413 245 aa9.5□□□□□ -0.89
RFWD2-201ENST00000308769 KRTAP8-1Q8IUC2 63 aa9.41□□□□□ -0.9
RFWD2-201ENST00000308769 NDUFAF8A1L188 74 aa9.35□□□□□ -0.91
RFWD2-201ENST00000308769 KRTAP12-3P60328 96 aa9.23□□□□□ -0.93
RFWD2-201ENST00000308769 SPRR5A0A1B0GTR4 108 aa9.15□□□□□ -0.94
RFWD2-201ENST00000308769 KMT2DO14686 5537 aa9.14□□□□□ -0.95
RFWD2-201ENST00000308769 SSPOA2VEC9 5147 aa9.14□□□□□ -0.95
RFWD2-201ENST00000308769 KRTAP4-8A0A0G2JLE6 195 aa9.08□□□□□ -0.96
RFWD2-201ENST00000308769 KRTAP4-8Q9BYQ9 185 aa9.08□□□□□ -0.96
RFWD2-201ENST00000308769 LUZP6Q538Z0 58 aa9.08□□□□□ -0.96
RFWD2-201ENST00000308769 KRTAP19-5Q3LI72 72 aa9.04□□□□□ -0.96
RFWD2-201ENST00000308769 H3BS24 57 aa9.04□□□□□ -0.96
RFWD2-201ENST00000308769 FSIP2Q5CZC0 6907 aa8.99□□□□□ -0.97
RFWD2-201ENST00000308769 KRTAP19-6Q3LI70 58 aa8.98□□□□□ -0.97
RFWD2-201ENST00000308769 LCE2DQ5TA82 110 aaPredicted RBP8.82□□□□□ -1
RFWD2-201ENST00000308769 KRTAP19-7Q3SYF9 63 aa8.8□□□□□ -1
RFWD2-201ENST00000308769 LCE3CQ5T5A8 94 aa8.65□□□□□ -1.02
RFWD2-201ENST00000308769 FCGBPQ9Y6R7 5405 aaPredicted RBP8.59□□□□□ -1.03
RFWD2-201ENST00000308769 MT1EP04732 61 aa8.58□□□□□ -1.04
RFWD2-201ENST00000308769 MT1LQ93083 61 aa8.49□□□□□ -1.05
RFWD2-201ENST00000308769 KRTAP9-2Q9BYQ4 174 aa8.47□□□□□ -1.05
RFWD2-201ENST00000308769 KRTAP4-7Q9BYR0 210 aa8.44□□□□□ -1.06
RFWD2-201ENST00000308769 KRTAP9-6A8MVA2 160 aa8.32□□□□□ -1.08
RFWD2-201ENST00000308769 KRTAP19-4Q3LI73 84 aa8.31□□□□□ -1.08
RFWD2-201ENST00000308769 MUC12Q9UKN1 5478 aa8.24□□□□□ -1.09
RFWD2-201ENST00000308769 A0A0A0MQY5 61 aa8.18□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms