RNA–Protein interactions for RNA: ENST00000306658.7

KRT28-201, Transcript of keratin 28, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene KRT28, Length 1,685 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KRT28-201ENST00000306658 LCA10Q71F78 164 aa8.69□□□□□ -1.02
KRT28-201ENST00000306658 V9GYY9 64 aa8.67□□□□□ -1.02
KRT28-201ENST00000306658 RNF213Q63HN8 5207 aa8.67□□□□□ -1.02
KRT28-201ENST00000306658 Q1T7F1 81 aa8.66□□□□□ -1.02
KRT28-201ENST00000306658 KRTAP19-2Q3LHN2 52 aa8.66□□□□□ -1.02
KRT28-201ENST00000306658 KRTAP3-3Q9BYR6 98 aa8.63□□□□□ -1.03
KRT28-201ENST00000306658 LINC01558Q9Y6Z2 57 aa8.6□□□□□ -1.03
KRT28-201ENST00000306658 CSAG1Q6PB30 78 aa8.56□□□□□ -1.04
KRT28-201ENST00000306658 PRR15LQ9BU68 103 aa8.52□□□□□ -1.05
KRT28-201ENST00000306658 FLGP20930 4061 aaPredicted RBP8.51□□□□□ -1.05
KRT28-201ENST00000306658 A0A1B0GU69 56 aa8.51□□□□□ -1.05
KRT28-201ENST00000306658 SEC61GP60059 68 aa8.51□□□□□ -1.05
KRT28-201ENST00000306658 PSPHP1O15172 72 aa8.5□□□□□ -1.05
KRT28-201ENST00000306658 LCE2CQ5TA81 110 aa8.49□□□□□ -1.05
KRT28-201ENST00000306658 Q5VV11 94 aa8.41□□□□□ -1.06
KRT28-201ENST00000306658 FAT4Q6V0I7 4981 aa8.36□□□□□ -1.07
KRT28-201ENST00000306658 H0YAA0 97 aa8.36□□□□□ -1.07
KRT28-201ENST00000306658 MT1HP80294 61 aa8.34□□□□□ -1.07
KRT28-201ENST00000306658 ADM2Q7Z4H4 148 aa8.34□□□□□ -1.08
KRT28-201ENST00000306658 M0R2T5 61 aa8.32□□□□□ -1.08
KRT28-201ENST00000306658 KRTAP3-2Q9BYR7 98 aa8.31□□□□□ -1.08
KRT28-201ENST00000306658 KRTAP10-6P60371 365 aaPredicted RBP8.3□□□□□ -1.08
KRT28-201ENST00000306658 A0A1B0GU33 70 aa8.27□□□□□ -1.09
KRT28-201ENST00000306658 A6NED7 52 aa8.27□□□□□ -1.09
KRT28-201ENST00000306658 UQCR11O14957 56 aa8.25□□□□□ -1.09
KRT28-201ENST00000306658 P0C880 135 aa8.25□□□□□ -1.09
KRT28-201ENST00000306658 MIR22HGQ0VDD5 57 aa8.14□□□□□ -1.11
KRT28-201ENST00000306658 SVIPQ8NHG7 77 aa8.13□□□□□ -1.11
KRT28-201ENST00000306658 BRK1Q8WUW1 75 aa8.13□□□□□ -1.11
KRT28-201ENST00000306658 SPATA8Q6RVD6 105 aa8.11□□□□□ -1.11
KRT28-201ENST00000306658 CDC42SE1Q9NRR8 79 aa8.1□□□□□ -1.11
KRT28-201ENST00000306658 M0QZ58 72 aa8.09□□□□□ -1.11
KRT28-201ENST00000306658 R4GN34 69 aa8.07□□□□□ -1.12
KRT28-201ENST00000306658 KRTAP13-4Q3LI77 160 aa8.05□□□□□ -1.12
KRT28-201ENST00000306658 LCE2AQ5TA79 106 aaPredicted RBP8.05□□□□□ -1.12
KRT28-201ENST00000306658 CRIPTQ9P021 101 aa8.04□□□□□ -1.12
KRT28-201ENST00000306658 LORP23490 312 aaPredicted RBP8.03□□□□□ -1.12
KRT28-201ENST00000306658 KRTAP9-8Q9BYQ0 159 aa8.02□□□□□ -1.13
KRT28-201ENST00000306658 A8MU10 97 aa7.99□□□□□ -1.13
KRT28-201ENST00000306658 MT2AP02795 61 aa7.99□□□□□ -1.13
KRT28-201ENST00000306658 KRTAP10-10P60014 251 aa7.97□□□□□ -1.13
KRT28-201ENST00000306658 MT1FP04733 61 aa7.94□□□□□ -1.14
KRT28-201ENST00000306658 A0A0D9SG42 100 aa7.93□□□□□ -1.14
KRT28-201ENST00000306658 PRO0628Q9UI54 55 aa7.92□□□□□ -1.14
KRT28-201ENST00000306658 LINC01554Q52M75 96 aa7.89□□□□□ -1.15
KRT28-201ENST00000306658 SPRR2GQ9BYE4 73 aa7.84□□□□□ -1.15
KRT28-201ENST00000306658 K7ERS5 55 aa7.83□□□□□ -1.16
KRT28-201ENST00000306658 KRTAP19-1Q8IUB9 90 aa7.79□□□□□ -1.16
KRT28-201ENST00000306658 SPINT4Q6UDR6 99 aa7.77□□□□□ -1.17
KRT28-201ENST00000306658 A6NN06 94 aa7.76□□□□□ -1.17
KRT28-201ENST00000306658 KRTAP12-1P59990 96 aa7.76□□□□□ -1.17
KRT28-201ENST00000306658 KRTAP12-2P59991 146 aa7.74□□□□□ -1.17
KRT28-201ENST00000306658 KRTAP9-3Q9BYQ3 159 aa7.74□□□□□ -1.17
KRT28-201ENST00000306658 PMAIP1Q13794 54 aa7.7□□□□□ -1.18
KRT28-201ENST00000306658 LCE2DQ5TA82 110 aaPredicted RBP7.68□□□□□ -1.18
KRT28-201ENST00000306658 KRTAP19-8Q3LI54 63 aa7.63□□□□□ -1.19
KRT28-201ENST00000306658 PLAC4Q8WY50 150 aa7.61□□□□□ -1.19
KRT28-201ENST00000306658 CAMK2N1Q7Z7J9 78 aa7.56□□□□□ -1.2
KRT28-201ENST00000306658 LCE2BO14633 110 aa7.52□□□□□ -1.21
KRT28-201ENST00000306658 MT1BP07438 61 aa7.51□□□□□ -1.21
KRT28-201ENST00000306658 ROMO1P60602 79 aa7.45□□□□□ -1.22
KRT28-201ENST00000306658 USH2AO75445 5202 aa7.35□□□□□ -1.23
KRT28-201ENST00000306658 C10orf95Q9H7T3 257 aa7.35□□□□□ -1.23
KRT28-201ENST00000306658 KTN1-AS1Q86SY8 53 aa7.34□□□□□ -1.23
KRT28-201ENST00000306658 MT1XP80297 61 aa7.26□□□□□ -1.25
KRT28-201ENST00000306658 PRO2289Q9P1D8 64 aa7.26□□□□□ -1.25
KRT28-201ENST00000306658 KRTAP10-5P60370 271 aa7.25□□□□□ -1.25
KRT28-201ENST00000306658 KRTAP25-1Q3LHN0 102 aa7.19□□□□□ -1.26
KRT28-201ENST00000306658 TNP1P09430 55 aa7.18□□□□□ -1.26
KRT28-201ENST00000306658 PRAC1Q96KF2 57 aa7.16□□□□□ -1.26
KRT28-201ENST00000306658 SSPOA2VEC9 5147 aa7.1□□□□□ -1.27
KRT28-201ENST00000306658 KRTAP19-6Q3LI70 58 aa7.09□□□□□ -1.27
KRT28-201ENST00000306658 FSIP2Q5CZC0 6907 aa7.08□□□□□ -1.28
KRT28-201ENST00000306658 KRTAP9-2Q9BYQ4 174 aa7.07□□□□□ -1.28
KRT28-201ENST00000306658 KRTAP10-7P60409 375 aaPredicted RBP6.96□□□□□ -1.29
KRT28-201ENST00000306658 KRTAP23-1A1A580 65 aa6.95□□□□□ -1.3
KRT28-201ENST00000306658 PP632Q6XCG6 107 aa6.95□□□□□ -1.3
KRT28-201ENST00000306658 KRTAP10-12P60413 245 aa6.9□□□□□ -1.3
KRT28-201ENST00000306658 LCE3AQ5TA76 89 aa6.84□□□□□ -1.32
KRT28-201ENST00000306658 FCGBPQ9Y6R7 5405 aaPredicted RBP6.83□□□□□ -1.32
KRT28-201ENST00000306658 CRCT1Q9UGL9 99 aa6.83□□□□□ -1.32
KRT28-201ENST00000306658 KRTAP8-1Q8IUC2 63 aa6.71□□□□□ -1.34
KRT28-201ENST00000306658 KRTAP4-8A0A0G2JLE6 195 aa6.7□□□□□ -1.34
KRT28-201ENST00000306658 KRTAP4-8Q9BYQ9 185 aa6.7□□□□□ -1.34
KRT28-201ENST00000306658 KMT2DO14686 5537 aa6.68□□□□□ -1.34
KRT28-201ENST00000306658 LOC100996750A0A140TA64 210 aa6.66□□□□□ -1.34
KRT28-201ENST00000306658 KRTAP4-6Q9BYQ5 205 aa6.66□□□□□ -1.34
KRT28-201ENST00000306658 KRTAP12-3P60328 96 aa6.59□□□□□ -1.35
KRT28-201ENST00000306658 KRTAP19-5Q3LI72 72 aa6.55□□□□□ -1.36
KRT28-201ENST00000306658 KRTAP9-6A0A140TA67 174 aa6.53□□□□□ -1.36
KRT28-201ENST00000306658 MACF1Q9UPN3 7388 aaKnown RBP6.5□□□□□ -1.37
KRT28-201ENST00000306658 KRTAP19-7Q3SYF9 63 aa6.47□□□□□ -1.37
KRT28-201ENST00000306658 KRTAP15-1Q3LI76 137 aa6.45□□□□□ -1.38
KRT28-201ENST00000306658 MT1EP04732 61 aa6.37□□□□□ -1.39
KRT28-201ENST00000306658 SYNE2Q8WXH0 6885 aaKnown RBP6.32□□□□□ -1.4
KRT28-201ENST00000306658 KRTAP9-1A8MXZ3 250 aaPredicted RBP6.3□□□□□ -1.4
KRT28-201ENST00000306658 SPRR2FQ96RM1 72 aa6.3□□□□□ -1.4
KRT28-201ENST00000306658 KRTAP5-9P26371 169 aa6.24□□□□□ -1.41
KRT28-201ENST00000306658 KRTAP19-4Q3LI73 84 aa6.23□□□□□ -1.41
KRT28-201ENST00000306658 MT1LQ93083 61 aa6.23□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 54.3 ms