RNA–Protein interactions for RNA: ENST00000305366.7

TM4SF1-201, Transcript of transmembrane 4 L six family member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TM4SF1, Length 1,771 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM4SF1-201ENST00000305366 C8orf17Q9NRJ1 99 aa4.58□□□□□ -1.68
TM4SF1-201ENST00000305366 IGLV7-43P04211 117 aa4.57□□□□□ -1.68
TM4SF1-201ENST00000305366 A0A1B0GVX0 72 aa4.56□□□□□ -1.68
TM4SF1-201ENST00000305366 MPLKIPQ8TAP9 179 aa4.56□□□□□ -1.68
TM4SF1-201ENST00000305366 LPAP08519 4548 aa4.54□□□□□ -1.68
TM4SF1-201ENST00000305366 IGLV7-46A0A075B6I9 117 aa4.53□□□□□ -1.68
TM4SF1-201ENST00000305366 PRAC1Q96KF2 57 aa4.53□□□□□ -1.69
TM4SF1-201ENST00000305366 MRPL34Q9BQ48 92 aaKnown RBP4.53□□□□□ -1.69
TM4SF1-201ENST00000305366 ANAPC11Q9NYG5 84 aa4.53□□□□□ -1.69
TM4SF1-201ENST00000305366 SSBP3-AS1Q7Z2R9 100 aa4.52□□□□□ -1.69
TM4SF1-201ENST00000305366 KRTAP1-4P0C5Y4 121 aa4.5□□□□□ -1.69
TM4SF1-201ENST00000305366 RETNLBQ9BQ08 111 aa4.49□□□□□ -1.69
TM4SF1-201ENST00000305366 PCOTHQ58A44 107 aa4.46□□□□□ -1.7
TM4SF1-201ENST00000305366 COA5Q86WW8 74 aa4.46□□□□□ -1.7
TM4SF1-201ENST00000305366 Q8N9P0 234 aaPredicted RBP4.46□□□□□ -1.7
TM4SF1-201ENST00000305366 LIMD2Q9BT23 127 aa4.46□□□□□ -1.7
TM4SF1-201ENST00000305366 MUC2Q02817 5179 aa4.46□□□□□ -1.7
TM4SF1-201ENST00000305366 LOC101927531A0A1B0GV80 90 aa4.45□□□□□ -1.7
TM4SF1-201ENST00000305366 KRTAP13-3Q3SY46 172 aa4.45□□□□□ -1.7
TM4SF1-201ENST00000305366 K7ERS5 55 aa4.45□□□□□ -1.7
TM4SF1-201ENST00000305366 TYMSOSQ8TAI1 123 aa4.45□□□□□ -1.7
TM4SF1-201ENST00000305366 LUZP6Q538Z0 58 aa4.44□□□□□ -1.7
TM4SF1-201ENST00000305366 KRTAP13-2Q52LG2 175 aa4.42□□□□□ -1.7
TM4SF1-201ENST00000305366 Q5VV11 94 aa4.42□□□□□ -1.7
TM4SF1-201ENST00000305366 Q5W150 140 aa4.42□□□□□ -1.7
TM4SF1-201ENST00000305366 CAMK2N1Q7Z7J9 78 aa4.42□□□□□ -1.7
TM4SF1-201ENST00000305366 CDC42SE1Q9NRR8 79 aa4.42□□□□□ -1.7
TM4SF1-201ENST00000305366 ADM2Q7Z4H4 148 aa4.41□□□□□ -1.7
TM4SF1-201ENST00000305366 SPTSSBQ8NFR3 76 aa4.41□□□□□ -1.7
TM4SF1-201ENST00000305366 HRES1P13985 223 aa4.4□□□□□ -1.71
TM4SF1-201ENST00000305366 LINC01558Q9Y6Z2 57 aa4.4□□□□□ -1.71
TM4SF1-201ENST00000305366 ROMO1P60602 79 aa4.39□□□□□ -1.71
TM4SF1-201ENST00000305366 PRR15LQ9BU68 103 aa4.38□□□□□ -1.71
TM4SF1-201ENST00000305366 A6NED7 52 aa4.37□□□□□ -1.71
TM4SF1-201ENST00000305366 LINC00304Q8N9R0 145 aa4.37□□□□□ -1.71
TM4SF1-201ENST00000305366 CHKB-CPT1BH3BT56 60 aa4.36□□□□□ -1.71
TM4SF1-201ENST00000305366 FAT4Q6V0I7 4981 aa4.35□□□□□ -1.71
TM4SF1-201ENST00000305366 KRTAP9-7A8MTY7 169 aa4.35□□□□□ -1.71
TM4SF1-201ENST00000305366 IGKV2-30P06310 120 aa4.35□□□□□ -1.71
TM4SF1-201ENST00000305366 ACYP2P14621 99 aa4.35□□□□□ -1.71
TM4SF1-201ENST00000305366 DMAC1Q96GE9 116 aa4.35□□□□□ -1.71
TM4SF1-201ENST00000305366 SPINK1P00995 79 aa4.34□□□□□ -1.71
TM4SF1-201ENST00000305366 RPS29P62273 56 aaKnown RBP4.33□□□□□ -1.72
TM4SF1-201ENST00000305366 SPAG11AQ6PDA7 123 aa4.33□□□□□ -1.72
TM4SF1-201ENST00000305366 KRTAP9-3Q9BYQ3 159 aa4.3□□□□□ -1.72
TM4SF1-201ENST00000305366 TPRXLQ17RH7 258 aa4.3□□□□□ -1.72
TM4SF1-201ENST00000305366 A8MU10 97 aa4.29□□□□□ -1.72
TM4SF1-201ENST00000305366 IGKV2D-30A0A075B6S6 120 aa4.25□□□□□ -1.73
TM4SF1-201ENST00000305366 SPINK7P58062 85 aa4.25□□□□□ -1.73
TM4SF1-201ENST00000305366 MIR22HGQ0VDD5 57 aa4.25□□□□□ -1.73
TM4SF1-201ENST00000305366 MUC17Q685J3 4493 aa4.24□□□□□ -1.73
TM4SF1-201ENST00000305366 KRTAP4-1Q9BYQ7 146 aa4.22□□□□□ -1.73
TM4SF1-201ENST00000305366 C20orf166-AS1Q96NR2 134 aa4.21□□□□□ -1.74
TM4SF1-201ENST00000305366 A0A1B0GU69 56 aa4.2□□□□□ -1.74
TM4SF1-201ENST00000305366 A8MUU9 505 aa4.2□□□□□ -1.74
TM4SF1-201ENST00000305366 FSIP2Q5CZC0 6907 aa4.19□□□□□ -1.74
TM4SF1-201ENST00000305366 P0C880 135 aa4.17□□□□□ -1.74
TM4SF1-201ENST00000305366 SPATA8Q6RVD6 105 aa4.17□□□□□ -1.74
TM4SF1-201ENST00000305366 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.16□□□□□ -1.74
TM4SF1-201ENST00000305366 C9orf92A6NGG3 77 aa4.14□□□□□ -1.75
TM4SF1-201ENST00000305366 UQCR11O14957 56 aa4.14□□□□□ -1.75
TM4SF1-201ENST00000305366 CSAG1Q6PB30 78 aa4.13□□□□□ -1.75
TM4SF1-201ENST00000305366 CRCT1Q9UGL9 99 aa4.1□□□□□ -1.75
TM4SF1-201ENST00000305366 KRTAP19-4Q3LI73 84 aa4.09□□□□□ -1.76
TM4SF1-201ENST00000305366 KRTAP3-1Q9BYR8 98 aa4.08□□□□□ -1.76
TM4SF1-201ENST00000305366 MT1HP80294 61 aa4.07□□□□□ -1.76
TM4SF1-201ENST00000305366 M0R2T5 61 aa4.07□□□□□ -1.76
TM4SF1-201ENST00000305366 NDUFAF8A1L188 74 aa4.06□□□□□ -1.76
TM4SF1-201ENST00000305366 KRTAP19-2Q3LHN2 52 aa4.06□□□□□ -1.76
TM4SF1-201ENST00000305366 COX6B2Q6YFQ2 88 aa4.04□□□□□ -1.76
TM4SF1-201ENST00000305366 KRTAP25-1Q3LHN0 102 aa4.03□□□□□ -1.76
TM4SF1-201ENST00000305366 A0A1B0GU33 70 aa4.02□□□□□ -1.77
TM4SF1-201ENST00000305366 KRTAP10-6P60371 365 aaPredicted RBP4.02□□□□□ -1.77
TM4SF1-201ENST00000305366 RPL37P61927 97 aaKnown RBP4□□□□□ -1.77
TM4SF1-201ENST00000305366 H0YAA0 97 aa3.99□□□□□ -1.77
TM4SF1-201ENST00000305366 H1FX-AS1Q4G0G2 97 aa3.99□□□□□ -1.77
TM4SF1-201ENST00000305366 KRTAP15-1Q3LI76 137 aa3.89□□□□□ -1.79
TM4SF1-201ENST00000305366 S4R3F8 94 aa3.89□□□□□ -1.79
TM4SF1-201ENST00000305366 FLGP20930 4061 aaPredicted RBP3.88□□□□□ -1.79
TM4SF1-201ENST00000305366 PRO2289Q9P1D8 64 aa3.84□□□□□ -1.8
TM4SF1-201ENST00000305366 USH2AO75445 5202 aa3.83□□□□□ -1.8
TM4SF1-201ENST00000305366 SSPOA2VEC9 5147 aa3.83□□□□□ -1.8
TM4SF1-201ENST00000305366 KRTAP5-9P26371 169 aa3.81□□□□□ -1.8
TM4SF1-201ENST00000305366 KRTAP13-4Q3LI77 160 aa3.81□□□□□ -1.8
TM4SF1-201ENST00000305366 SPINT4Q6UDR6 99 aa3.81□□□□□ -1.8
TM4SF1-201ENST00000305366 MT2AP02795 61 aa3.77□□□□□ -1.81
TM4SF1-201ENST00000305366 KRTAP10-10P60014 251 aa3.76□□□□□ -1.81
TM4SF1-201ENST00000305366 R4GN34 69 aa3.76□□□□□ -1.81
TM4SF1-201ENST00000305366 MT1FP04733 61 aa3.75□□□□□ -1.81
TM4SF1-201ENST00000305366 FCGBPQ9Y6R7 5405 aaPredicted RBP3.75□□□□□ -1.81
TM4SF1-201ENST00000305366 A0A0D9SG42 100 aa3.74□□□□□ -1.81
TM4SF1-201ENST00000305366 M0QZ58 72 aa3.72□□□□□ -1.81
TM4SF1-201ENST00000305366 SYNE2Q8WXH0 6885 aaKnown RBP3.72□□□□□ -1.81
TM4SF1-201ENST00000305366 MACF1Q9UPN3 7388 aaKnown RBP3.7□□□□□ -1.82
TM4SF1-201ENST00000305366 KRTAP12-1P59990 96 aa3.69□□□□□ -1.82
TM4SF1-201ENST00000305366 KRTAP12-2P59991 146 aa3.68□□□□□ -1.82
TM4SF1-201ENST00000305366 CRIPTQ9P021 101 aa3.66□□□□□ -1.82
TM4SF1-201ENST00000305366 KRTAP19-6Q3LI70 58 aa3.58□□□□□ -1.84
TM4SF1-201ENST00000305366 C10orf95Q9H7T3 257 aa3.56□□□□□ -1.84
TM4SF1-201ENST00000305366 KRTAP5-4Q6L8H1 288 aa3.56□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 123.9 ms