RNA–Protein interactions for RNA: ENST00000300227.12

CCDC178-201, Transcript of coiled-coil domain containing 178, humanhuman

APPRIS P3 TSL 2 BASIC

Gene CCDC178, Length 3,087 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC178-201ENST00000300227 V9GYY9 64 aa6.91□□□□□ -1.3
CCDC178-201ENST00000300227 LCA10Q71F78 164 aa6.91□□□□□ -1.3
CCDC178-201ENST00000300227 S4R3F8 94 aa6.9□□□□□ -1.3
CCDC178-201ENST00000300227 UBR4Q5T4S7 5183 aa6.89□□□□□ -1.31
CCDC178-201ENST00000300227 SPTSSBQ8NFR3 76 aa6.89□□□□□ -1.31
CCDC178-201ENST00000300227 LINC01558Q9Y6Z2 57 aa6.88□□□□□ -1.31
CCDC178-201ENST00000300227 KRTAP3-3Q9BYR6 98 aa6.85□□□□□ -1.31
CCDC178-201ENST00000300227 A0A1B0GU69 56 aa6.82□□□□□ -1.32
CCDC178-201ENST00000300227 RNF213Q63HN8 5207 aa6.82□□□□□ -1.32
CCDC178-201ENST00000300227 Q5VV11 94 aa6.81□□□□□ -1.32
CCDC178-201ENST00000300227 KRTAP19-2Q3LHN2 52 aa6.78□□□□□ -1.32
CCDC178-201ENST00000300227 SEC61GP60059 68 aa6.77□□□□□ -1.33
CCDC178-201ENST00000300227 CSAG1Q6PB30 78 aa6.75□□□□□ -1.33
CCDC178-201ENST00000300227 FAT4Q6V0I7 4981 aa6.71□□□□□ -1.33
CCDC178-201ENST00000300227 A6NED7 52 aa6.71□□□□□ -1.34
CCDC178-201ENST00000300227 BRK1Q8WUW1 75 aa6.68□□□□□ -1.34
CCDC178-201ENST00000300227 LCE2CQ5TA81 110 aa6.64□□□□□ -1.35
CCDC178-201ENST00000300227 ADM2Q7Z4H4 148 aa6.64□□□□□ -1.35
CCDC178-201ENST00000300227 A8MU10 97 aa6.62□□□□□ -1.35
CCDC178-201ENST00000300227 P0C880 135 aa6.62□□□□□ -1.35
CCDC178-201ENST00000300227 KRTAP3-2Q9BYR7 98 aa6.62□□□□□ -1.35
CCDC178-201ENST00000300227 FLGP20930 4061 aaPredicted RBP6.62□□□□□ -1.35
CCDC178-201ENST00000300227 KRTAP10-6P60371 365 aaPredicted RBP6.61□□□□□ -1.35
CCDC178-201ENST00000300227 A0A1B0GU33 70 aa6.61□□□□□ -1.35
CCDC178-201ENST00000300227 UQCR11O14957 56 aa6.6□□□□□ -1.35
CCDC178-201ENST00000300227 M0R2T5 61 aa6.56□□□□□ -1.36
CCDC178-201ENST00000300227 MIR22HGQ0VDD5 57 aa6.55□□□□□ -1.36
CCDC178-201ENST00000300227 SPATA8Q6RVD6 105 aa6.55□□□□□ -1.36
CCDC178-201ENST00000300227 MT1HP80294 61 aa6.52□□□□□ -1.37
CCDC178-201ENST00000300227 CDC42SE1Q9NRR8 79 aa6.52□□□□□ -1.37
CCDC178-201ENST00000300227 H0YAA0 97 aa6.5□□□□□ -1.37
CCDC178-201ENST00000300227 KRTAP13-4Q3LI77 160 aa6.48□□□□□ -1.37
CCDC178-201ENST00000300227 PRO0628Q9UI54 55 aa6.46□□□□□ -1.38
CCDC178-201ENST00000300227 A0A0D9SG42 100 aa6.44□□□□□ -1.38
CCDC178-201ENST00000300227 LORP23490 312 aaPredicted RBP6.44□□□□□ -1.38
CCDC178-201ENST00000300227 M0QZ58 72 aa6.4□□□□□ -1.38
CCDC178-201ENST00000300227 R4GN34 69 aa6.4□□□□□ -1.38
CCDC178-201ENST00000300227 LINC01554Q52M75 96 aa6.37□□□□□ -1.39
CCDC178-201ENST00000300227 PMAIP1Q13794 54 aa6.3□□□□□ -1.4
CCDC178-201ENST00000300227 KRTAP10-10P60014 251 aa6.28□□□□□ -1.4
CCDC178-201ENST00000300227 MT2AP02795 61 aa6.27□□□□□ -1.41
CCDC178-201ENST00000300227 KRTAP9-8Q9BYQ0 159 aa6.27□□□□□ -1.41
CCDC178-201ENST00000300227 SPINT4Q6UDR6 99 aa6.26□□□□□ -1.41
CCDC178-201ENST00000300227 MT1FP04733 61 aa6.26□□□□□ -1.41
CCDC178-201ENST00000300227 K7ERS5 55 aa6.24□□□□□ -1.41
CCDC178-201ENST00000300227 KRTAP12-2P59991 146 aa6.22□□□□□ -1.41
CCDC178-201ENST00000300227 CRIPTQ9P021 101 aa6.21□□□□□ -1.42
CCDC178-201ENST00000300227 KRTAP12-1P59990 96 aa6.2□□□□□ -1.42
CCDC178-201ENST00000300227 LCE2AQ5TA79 106 aaPredicted RBP6.2□□□□□ -1.42
CCDC178-201ENST00000300227 A6NN06 94 aa6.19□□□□□ -1.42
CCDC178-201ENST00000300227 KRTAP19-1Q8IUB9 90 aa6.14□□□□□ -1.43
CCDC178-201ENST00000300227 SPRR2GQ9BYE4 73 aa6.11□□□□□ -1.43
CCDC178-201ENST00000300227 KRTAP9-3Q9BYQ3 159 aa6.04□□□□□ -1.44
CCDC178-201ENST00000300227 CAMK2N1Q7Z7J9 78 aa6.02□□□□□ -1.44
CCDC178-201ENST00000300227 PLAC4Q8WY50 150 aa5.98□□□□□ -1.45
CCDC178-201ENST00000300227 KTN1-AS1Q86SY8 53 aa5.98□□□□□ -1.45
CCDC178-201ENST00000300227 ROMO1P60602 79 aa5.97□□□□□ -1.45
CCDC178-201ENST00000300227 PRAC1Q96KF2 57 aa5.95□□□□□ -1.46
CCDC178-201ENST00000300227 KRTAP19-8Q3LI54 63 aa5.93□□□□□ -1.46
CCDC178-201ENST00000300227 MT1BP07438 61 aa5.9□□□□□ -1.46
CCDC178-201ENST00000300227 LCE2BO14633 110 aa5.9□□□□□ -1.46
CCDC178-201ENST00000300227 SVIPQ8NHG7 77 aa5.89□□□□□ -1.47
CCDC178-201ENST00000300227 C10orf95Q9H7T3 257 aa5.88□□□□□ -1.47
CCDC178-201ENST00000300227 USH2AO75445 5202 aa5.85□□□□□ -1.47
CCDC178-201ENST00000300227 FSIP2Q5CZC0 6907 aa5.74□□□□□ -1.49
CCDC178-201ENST00000300227 MT1XP80297 61 aa5.72□□□□□ -1.49
CCDC178-201ENST00000300227 KRTAP10-5P60370 271 aa5.71□□□□□ -1.5
CCDC178-201ENST00000300227 KRTAP25-1Q3LHN0 102 aa5.71□□□□□ -1.5
CCDC178-201ENST00000300227 TNP1P09430 55 aa5.68□□□□□ -1.5
CCDC178-201ENST00000300227 PRO2289Q9P1D8 64 aa5.64□□□□□ -1.51
CCDC178-201ENST00000300227 SSPOA2VEC9 5147 aa5.6□□□□□ -1.51
CCDC178-201ENST00000300227 LCE2DQ5TA82 110 aaPredicted RBP5.57□□□□□ -1.52
CCDC178-201ENST00000300227 KRTAP10-7P60409 375 aaPredicted RBP5.54□□□□□ -1.52
CCDC178-201ENST00000300227 LCE3AQ5TA76 89 aa5.46□□□□□ -1.53
CCDC178-201ENST00000300227 KRTAP19-6Q3LI70 58 aa5.46□□□□□ -1.54
CCDC178-201ENST00000300227 PP632Q6XCG6 107 aa5.46□□□□□ -1.54
CCDC178-201ENST00000300227 KRTAP10-12P60413 245 aa5.46□□□□□ -1.54
CCDC178-201ENST00000300227 KRTAP9-2Q9BYQ4 174 aa5.44□□□□□ -1.54
CCDC178-201ENST00000300227 KMT2DO14686 5537 aa5.41□□□□□ -1.54
CCDC178-201ENST00000300227 KRTAP23-1A1A580 65 aa5.38□□□□□ -1.55
CCDC178-201ENST00000300227 KRTAP4-8A0A0G2JLE6 195 aa5.35□□□□□ -1.55
CCDC178-201ENST00000300227 KRTAP4-8Q9BYQ9 185 aa5.35□□□□□ -1.55
CCDC178-201ENST00000300227 FCGBPQ9Y6R7 5405 aaPredicted RBP5.35□□□□□ -1.55
CCDC178-201ENST00000300227 KRTAP8-1Q8IUC2 63 aa5.28□□□□□ -1.56
CCDC178-201ENST00000300227 CRCT1Q9UGL9 99 aa5.25□□□□□ -1.57
CCDC178-201ENST00000300227 KRTAP12-3P60328 96 aa5.23□□□□□ -1.57
CCDC178-201ENST00000300227 KRTAP19-5Q3LI72 72 aa5.21□□□□□ -1.58
CCDC178-201ENST00000300227 MACF1Q9UPN3 7388 aaKnown RBP5.15□□□□□ -1.59
CCDC178-201ENST00000300227 KRTAP15-1Q3LI76 137 aa5.12□□□□□ -1.59
CCDC178-201ENST00000300227 KRTAP19-7Q3SYF9 63 aa5.1□□□□□ -1.59
CCDC178-201ENST00000300227 SYNE2Q8WXH0 6885 aaKnown RBP5.02□□□□□ -1.61
CCDC178-201ENST00000300227 MT1EP04732 61 aa5□□□□□ -1.61
CCDC178-201ENST00000300227 MUC12Q9UKN1 5478 aa4.99□□□□□ -1.61
CCDC178-201ENST00000300227 KRTAP9-6A0A140TA67 174 aa4.98□□□□□ -1.61
CCDC178-201ENST00000300227 SPRR2FQ96RM1 72 aa4.96□□□□□ -1.62
CCDC178-201ENST00000300227 MT1LQ93083 61 aa4.91□□□□□ -1.62
CCDC178-201ENST00000300227 LCE3CQ5T5A8 94 aa4.86□□□□□ -1.63
CCDC178-201ENST00000300227 KRTAP4-7Q9BYR0 210 aa4.86□□□□□ -1.63
CCDC178-201ENST00000300227 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.84□□□□□ -1.63
CCDC178-201ENST00000300227 SPRR5A0A1B0GTR4 108 aa4.83□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms