RNA–Protein interactions for RNA: ENST00000298428.13

SEC61A2-201, Transcript of Sec61 translocon alpha 2 subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SEC61A2, Length 1,893 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A2-201ENST00000298428 KRTAP19-2Q3LHN2 52 aa9.17□□□□□ -0.94
SEC61A2-201ENST00000298428 LCA10Q71F78 164 aa9.17□□□□□ -0.94
SEC61A2-201ENST00000298428 SPTSSBQ8NFR3 76 aa9.16□□□□□ -0.94
SEC61A2-201ENST00000298428 KRTAP3-3Q9BYR6 98 aa9.12□□□□□ -0.95
SEC61A2-201ENST00000298428 Q1T7F1 81 aa9.09□□□□□ -0.95
SEC61A2-201ENST00000298428 V9GYY9 64 aa9.07□□□□□ -0.96
SEC61A2-201ENST00000298428 LINC01558Q9Y6Z2 57 aa9.04□□□□□ -0.96
SEC61A2-201ENST00000298428 FLGP20930 4061 aaPredicted RBP9.02□□□□□ -0.97
SEC61A2-201ENST00000298428 CSAG1Q6PB30 78 aa9□□□□□ -0.97
SEC61A2-201ENST00000298428 LCE2CQ5TA81 110 aa8.99□□□□□ -0.97
SEC61A2-201ENST00000298428 PRR15LQ9BU68 103 aa8.97□□□□□ -0.97
SEC61A2-201ENST00000298428 PSPHP1O15172 72 aa8.96□□□□□ -0.97
SEC61A2-201ENST00000298428 A0A1B0GU69 56 aa8.94□□□□□ -0.98
SEC61A2-201ENST00000298428 FAT4Q6V0I7 4981 aa8.93□□□□□ -0.98
SEC61A2-201ENST00000298428 SEC61GP60059 68 aa8.91□□□□□ -0.98
SEC61A2-201ENST00000298428 Q5VV11 94 aa8.87□□□□□ -0.99
SEC61A2-201ENST00000298428 MT1HP80294 61 aa8.83□□□□□ -1
SEC61A2-201ENST00000298428 ADM2Q7Z4H4 148 aa8.79□□□□□ -1
SEC61A2-201ENST00000298428 H0YAA0 97 aa8.78□□□□□ -1
SEC61A2-201ENST00000298428 KRTAP3-2Q9BYR7 98 aa8.77□□□□□ -1.01
SEC61A2-201ENST00000298428 M0R2T5 61 aa8.77□□□□□ -1.01
SEC61A2-201ENST00000298428 KRTAP10-6P60371 365 aaPredicted RBP8.76□□□□□ -1.01
SEC61A2-201ENST00000298428 P0C880 135 aa8.72□□□□□ -1.01
SEC61A2-201ENST00000298428 A0A1B0GU33 70 aa8.68□□□□□ -1.02
SEC61A2-201ENST00000298428 A6NED7 52 aa8.68□□□□□ -1.02
SEC61A2-201ENST00000298428 UQCR11O14957 56 aa8.66□□□□□ -1.02
SEC61A2-201ENST00000298428 MIR22HGQ0VDD5 57 aa8.55□□□□□ -1.04
SEC61A2-201ENST00000298428 SPATA8Q6RVD6 105 aa8.55□□□□□ -1.04
SEC61A2-201ENST00000298428 BRK1Q8WUW1 75 aa8.55□□□□□ -1.04
SEC61A2-201ENST00000298428 KRTAP13-4Q3LI77 160 aa8.53□□□□□ -1.04
SEC61A2-201ENST00000298428 LORP23490 312 aaPredicted RBP8.51□□□□□ -1.05
SEC61A2-201ENST00000298428 LCE2AQ5TA79 106 aaPredicted RBP8.51□□□□□ -1.05
SEC61A2-201ENST00000298428 CDC42SE1Q9NRR8 79 aa8.51□□□□□ -1.05
SEC61A2-201ENST00000298428 M0QZ58 72 aa8.49□□□□□ -1.05
SEC61A2-201ENST00000298428 LCE2DQ5TA82 110 aaPredicted RBP8.49□□□□□ -1.05
SEC61A2-201ENST00000298428 KRTAP9-8Q9BYQ0 159 aa8.49□□□□□ -1.05
SEC61A2-201ENST00000298428 R4GN34 69 aa8.49□□□□□ -1.05
SEC61A2-201ENST00000298428 A8MU10 97 aa8.47□□□□□ -1.05
SEC61A2-201ENST00000298428 MT2AP02795 61 aa8.47□□□□□ -1.05
SEC61A2-201ENST00000298428 MT1FP04733 61 aa8.42□□□□□ -1.06
SEC61A2-201ENST00000298428 CRIPTQ9P021 101 aa8.42□□□□□ -1.06
SEC61A2-201ENST00000298428 KRTAP10-10P60014 251 aa8.4□□□□□ -1.06
SEC61A2-201ENST00000298428 A0A0D9SG42 100 aa8.38□□□□□ -1.07
SEC61A2-201ENST00000298428 LINC01554Q52M75 96 aa8.34□□□□□ -1.07
SEC61A2-201ENST00000298428 PRO0628Q9UI54 55 aa8.3□□□□□ -1.08
SEC61A2-201ENST00000298428 SPRR2GQ9BYE4 73 aa8.26□□□□□ -1.09
SEC61A2-201ENST00000298428 KRTAP19-1Q8IUB9 90 aa8.24□□□□□ -1.09
SEC61A2-201ENST00000298428 KRTAP12-1P59990 96 aa8.19□□□□□ -1.1
SEC61A2-201ENST00000298428 SPINT4Q6UDR6 99 aa8.19□□□□□ -1.1
SEC61A2-201ENST00000298428 K7ERS5 55 aa8.18□□□□□ -1.1
SEC61A2-201ENST00000298428 KRTAP9-3Q9BYQ3 159 aa8.18□□□□□ -1.1
SEC61A2-201ENST00000298428 KRTAP12-2P59991 146 aa8.17□□□□□ -1.1
SEC61A2-201ENST00000298428 A6NN06 94 aa8.15□□□□□ -1.11
SEC61A2-201ENST00000298428 PMAIP1Q13794 54 aa8.06□□□□□ -1.12
SEC61A2-201ENST00000298428 KRTAP19-8Q3LI54 63 aa8.04□□□□□ -1.12
SEC61A2-201ENST00000298428 PLAC4Q8WY50 150 aa7.99□□□□□ -1.13
SEC61A2-201ENST00000298428 LCE2BO14633 110 aa7.97□□□□□ -1.13
SEC61A2-201ENST00000298428 MT1BP07438 61 aa7.95□□□□□ -1.14
SEC61A2-201ENST00000298428 CAMK2N1Q7Z7J9 78 aa7.94□□□□□ -1.14
SEC61A2-201ENST00000298428 USH2AO75445 5202 aa7.83□□□□□ -1.16
SEC61A2-201ENST00000298428 ROMO1P60602 79 aa7.83□□□□□ -1.16
SEC61A2-201ENST00000298428 C10orf95Q9H7T3 257 aa7.76□□□□□ -1.17
SEC61A2-201ENST00000298428 KTN1-AS1Q86SY8 53 aa7.7□□□□□ -1.18
SEC61A2-201ENST00000298428 MT1XP80297 61 aa7.68□□□□□ -1.18
SEC61A2-201ENST00000298428 KRTAP10-5P60370 271 aa7.67□□□□□ -1.18
SEC61A2-201ENST00000298428 PRO2289Q9P1D8 64 aa7.62□□□□□ -1.19
SEC61A2-201ENST00000298428 FSIP2Q5CZC0 6907 aa7.58□□□□□ -1.2
SEC61A2-201ENST00000298428 SSPOA2VEC9 5147 aa7.58□□□□□ -1.2
SEC61A2-201ENST00000298428 PRAC1Q96KF2 57 aa7.57□□□□□ -1.2
SEC61A2-201ENST00000298428 TNP1P09430 55 aa7.53□□□□□ -1.2
SEC61A2-201ENST00000298428 KRTAP25-1Q3LHN0 102 aa7.53□□□□□ -1.2
SEC61A2-201ENST00000298428 KRTAP19-6Q3LI70 58 aa7.49□□□□□ -1.21
SEC61A2-201ENST00000298428 KRTAP9-2Q9BYQ4 174 aa7.49□□□□□ -1.21
SEC61A2-201ENST00000298428 SVIPQ8NHG7 77 aa7.49□□□□□ -1.21
SEC61A2-201ENST00000298428 KRTAP10-7P60409 375 aaPredicted RBP7.38□□□□□ -1.23
SEC61A2-201ENST00000298428 KRTAP10-12P60413 245 aa7.29□□□□□ -1.24
SEC61A2-201ENST00000298428 PP632Q6XCG6 107 aa7.27□□□□□ -1.25
SEC61A2-201ENST00000298428 FCGBPQ9Y6R7 5405 aaPredicted RBP7.27□□□□□ -1.25
SEC61A2-201ENST00000298428 KRTAP23-1A1A580 65 aa7.26□□□□□ -1.25
SEC61A2-201ENST00000298428 LCE3AQ5TA76 89 aa7.23□□□□□ -1.25
SEC61A2-201ENST00000298428 CRCT1Q9UGL9 99 aa7.22□□□□□ -1.25
SEC61A2-201ENST00000298428 KMT2DO14686 5537 aa7.16□□□□□ -1.26
SEC61A2-201ENST00000298428 KRTAP4-8A0A0G2JLE6 195 aa7.11□□□□□ -1.27
SEC61A2-201ENST00000298428 KRTAP4-8Q9BYQ9 185 aa7.11□□□□□ -1.27
SEC61A2-201ENST00000298428 KRTAP8-1Q8IUC2 63 aa7.07□□□□□ -1.28
SEC61A2-201ENST00000298428 MACF1Q9UPN3 7388 aaKnown RBP6.95□□□□□ -1.3
SEC61A2-201ENST00000298428 KRTAP12-3P60328 96 aa6.94□□□□□ -1.3
SEC61A2-201ENST00000298428 KRTAP19-5Q3LI72 72 aa6.94□□□□□ -1.3
SEC61A2-201ENST00000298428 KRTAP9-6A0A140TA67 174 aa6.92□□□□□ -1.3
SEC61A2-201ENST00000298428 KRTAP19-7Q3SYF9 63 aa6.85□□□□□ -1.31
SEC61A2-201ENST00000298428 KRTAP15-1Q3LI76 137 aa6.78□□□□□ -1.32
SEC61A2-201ENST00000298428 SYNE2Q8WXH0 6885 aaKnown RBP6.77□□□□□ -1.33
SEC61A2-201ENST00000298428 MT1EP04732 61 aa6.74□□□□□ -1.33
SEC61A2-201ENST00000298428 KRTAP9-1A8MXZ3 250 aaPredicted RBP6.68□□□□□ -1.34
SEC61A2-201ENST00000298428 SPRR2FQ96RM1 72 aa6.67□□□□□ -1.34
SEC61A2-201ENST00000298428 MUC12Q9UKN1 5478 aa6.63□□□□□ -1.35
SEC61A2-201ENST00000298428 KRTAP5-9P26371 169 aa6.6□□□□□ -1.35
SEC61A2-201ENST00000298428 MT1LQ93083 61 aa6.6□□□□□ -1.35
SEC61A2-201ENST00000298428 KRTAP6-3Q3LI67 103 aa6.51□□□□□ -1.37
SEC61A2-201ENST00000298428 KRTAP19-3Q7Z4W3 81 aa6.49□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 121.3 ms