RNA–Protein interactions for RNA: ENST00000297615.9

TTC39B-201, Transcript of tetratricopeptide repeat domain 39B, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene TTC39B, Length 3,053 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39B-201ENST00000297615 A8MUU9 505 aa7.17□□□□□ -1.26
TTC39B-201ENST00000297615 C20orf166-AS1Q96NR2 134 aa7.16□□□□□ -1.26
TTC39B-201ENST00000297615 RPS29P62273 56 aaKnown RBP7.14□□□□□ -1.27
TTC39B-201ENST00000297615 TNXBP22105 4242 aa7.12□□□□□ -1.27
TTC39B-201ENST00000297615 KRTAP10-8P60410 259 aa7.12□□□□□ -1.27
TTC39B-201ENST00000297615 A0A1B0GU33 70 aa7.09□□□□□ -1.27
TTC39B-201ENST00000297615 H0YAA0 97 aa7.09□□□□□ -1.27
TTC39B-201ENST00000297615 CRIPTQ9P021 101 aa7.08□□□□□ -1.28
TTC39B-201ENST00000297615 CSAG1Q6PB30 78 aa7.07□□□□□ -1.28
TTC39B-201ENST00000297615 MUC2Q02817 5179 aa7.06□□□□□ -1.28
TTC39B-201ENST00000297615 XP32Q5T750 250 aa7.05□□□□□ -1.28
TTC39B-201ENST00000297615 A0A0D9SG42 100 aa7.04□□□□□ -1.28
TTC39B-201ENST00000297615 COX6B2Q6YFQ2 88 aa7.04□□□□□ -1.28
TTC39B-201ENST00000297615 MT1HL1P0DM35 61 aa7.02□□□□□ -1.29
TTC39B-201ENST00000297615 H1FX-AS1Q4G0G2 97 aa7□□□□□ -1.29
TTC39B-201ENST00000297615 RPL37P61927 97 aaKnown RBP6.94□□□□□ -1.3
TTC39B-201ENST00000297615 HERC2O95714 4834 aa6.93□□□□□ -1.3
TTC39B-201ENST00000297615 J3QL48 77 aa6.9□□□□□ -1.3
TTC39B-201ENST00000297615 LINC01554Q52M75 96 aa6.9□□□□□ -1.3
TTC39B-201ENST00000297615 S4R3F8 94 aa6.87□□□□□ -1.31
TTC39B-201ENST00000297615 K7ERS5 55 aa6.86□□□□□ -1.31
TTC39B-201ENST00000297615 P0C880 135 aa6.84□□□□□ -1.31
TTC39B-201ENST00000297615 KRTAP13-4Q3LI77 160 aa6.84□□□□□ -1.31
TTC39B-201ENST00000297615 KRTAP3-3Q9BYR6 98 aa6.84□□□□□ -1.31
TTC39B-201ENST00000297615 HERC1Q15751 4861 aa6.83□□□□□ -1.32
TTC39B-201ENST00000297615 KRTAP10-6P60371 365 aaPredicted RBP6.79□□□□□ -1.32
TTC39B-201ENST00000297615 SPINT4Q6UDR6 99 aa6.76□□□□□ -1.33
TTC39B-201ENST00000297615 KRTAP3-2Q9BYR7 98 aa6.73□□□□□ -1.33
TTC39B-201ENST00000297615 RNF213Q63HN8 5207 aa6.72□□□□□ -1.33
TTC39B-201ENST00000297615 KRTAP25-1Q3LHN0 102 aa6.71□□□□□ -1.33
TTC39B-201ENST00000297615 PCLOQ9Y6V0 5065 aa6.69□□□□□ -1.34
TTC39B-201ENST00000297615 FAT4Q6V0I7 4981 aa6.69□□□□□ -1.34
TTC39B-201ENST00000297615 C10orf95Q9H7T3 257 aa6.68□□□□□ -1.34
TTC39B-201ENST00000297615 KRTAP4-1Q9BYQ7 146 aa6.67□□□□□ -1.34
TTC39B-201ENST00000297615 ROMO1P60602 79 aa6.65□□□□□ -1.35
TTC39B-201ENST00000297615 TPRXLQ17RH7 258 aa6.63□□□□□ -1.35
TTC39B-201ENST00000297615 KRTAP12-2P59991 146 aa6.62□□□□□ -1.35
TTC39B-201ENST00000297615 LORP23490 312 aaPredicted RBP6.55□□□□□ -1.36
TTC39B-201ENST00000297615 UBR4Q5T4S7 5183 aa6.53□□□□□ -1.36
TTC39B-201ENST00000297615 M0QZ58 72 aa6.53□□□□□ -1.36
TTC39B-201ENST00000297615 SEC61BP60468 96 aaKnown RBP6.51□□□□□ -1.37
TTC39B-201ENST00000297615 BIRC6Q9NR09 4857 aa6.49□□□□□ -1.37
TTC39B-201ENST00000297615 KRTAP12-1P59990 96 aa6.49□□□□□ -1.37
TTC39B-201ENST00000297615 R4GN34 69 aa6.48□□□□□ -1.37
TTC39B-201ENST00000297615 MUC17Q685J3 4493 aa6.44□□□□□ -1.38
TTC39B-201ENST00000297615 H3BS24 57 aa6.41□□□□□ -1.38
TTC39B-201ENST00000297615 M0R2T5 61 aa6.31□□□□□ -1.4
TTC39B-201ENST00000297615 HMCN2Q8NDA2 5059 aa6.31□□□□□ -1.4
TTC39B-201ENST00000297615 CAMK2N1Q7Z7J9 78 aa6.22□□□□□ -1.41
TTC39B-201ENST00000297615 KRTAP19-2Q3LHN2 52 aa6.18□□□□□ -1.42
TTC39B-201ENST00000297615 NDUFAF8A1L188 74 aa6.17□□□□□ -1.42
TTC39B-201ENST00000297615 FLGP20930 4061 aaPredicted RBP6.1□□□□□ -1.43
TTC39B-201ENST00000297615 KRTAP15-1Q3LI76 137 aa6.05□□□□□ -1.44
TTC39B-201ENST00000297615 KRTAP10-10P60014 251 aa6□□□□□ -1.45
TTC39B-201ENST00000297615 LCE2CQ5TA81 110 aa6□□□□□ -1.45
TTC39B-201ENST00000297615 USH2AO75445 5202 aa5.99□□□□□ -1.45
TTC39B-201ENST00000297615 FSIP2Q5CZC0 6907 aa5.98□□□□□ -1.45
TTC39B-201ENST00000297615 PLAC4Q8WY50 150 aa5.94□□□□□ -1.46
TTC39B-201ENST00000297615 MT1HP80294 61 aa5.91□□□□□ -1.46
TTC39B-201ENST00000297615 MT1FP04733 61 aa5.85□□□□□ -1.47
TTC39B-201ENST00000297615 TNP1P09430 55 aa5.81□□□□□ -1.48
TTC39B-201ENST00000297615 KRTAP19-1Q8IUB9 90 aa5.79□□□□□ -1.48
TTC39B-201ENST00000297615 MT2AP02795 61 aa5.78□□□□□ -1.48
TTC39B-201ENST00000297615 KMT2DO14686 5537 aa5.76□□□□□ -1.49
TTC39B-201ENST00000297615 PP632Q6XCG6 107 aa5.72□□□□□ -1.49
TTC39B-201ENST00000297615 LUZP6Q538Z0 58 aa5.71□□□□□ -1.49
TTC39B-201ENST00000297615 KRTAP9-8Q9BYQ0 159 aa5.71□□□□□ -1.5
TTC39B-201ENST00000297615 SPRR2GQ9BYE4 73 aa5.61□□□□□ -1.51
TTC39B-201ENST00000297615 LCE3AQ5TA76 89 aa5.57□□□□□ -1.52
TTC39B-201ENST00000297615 MT1BP07438 61 aa5.5□□□□□ -1.53
TTC39B-201ENST00000297615 KRTAP10-7P60409 375 aaPredicted RBP5.44□□□□□ -1.54
TTC39B-201ENST00000297615 KRTAP9-3Q9BYQ3 159 aa5.44□□□□□ -1.54
TTC39B-201ENST00000297615 MT1XP80297 61 aa5.43□□□□□ -1.54
TTC39B-201ENST00000297615 KRTAP10-5P60370 271 aa5.43□□□□□ -1.54
TTC39B-201ENST00000297615 LCE2BO14633 110 aa5.41□□□□□ -1.54
TTC39B-201ENST00000297615 KRTAP4-8A0A0G2JLE6 195 aa5.34□□□□□ -1.56
TTC39B-201ENST00000297615 KRTAP4-8Q9BYQ9 185 aa5.34□□□□□ -1.56
TTC39B-201ENST00000297615 A0A0A0MQY5 61 aa5.33□□□□□ -1.56
TTC39B-201ENST00000297615 KRTAP19-8Q3LI54 63 aa5.33□□□□□ -1.56
TTC39B-201ENST00000297615 KRTAP23-1A1A580 65 aa5.32□□□□□ -1.56
TTC39B-201ENST00000297615 KRTAP10-12P60413 245 aa5.32□□□□□ -1.56
TTC39B-201ENST00000297615 KRTAP12-3P60328 96 aa5.26□□□□□ -1.57
TTC39B-201ENST00000297615 SPRR5A0A1B0GTR4 108 aa5.24□□□□□ -1.57
TTC39B-201ENST00000297615 SSPOA2VEC9 5147 aa5.21□□□□□ -1.57
TTC39B-201ENST00000297615 DSTQ03001 7570 aaKnown RBP5.21□□□□□ -1.57
TTC39B-201ENST00000297615 KRTAP8-1Q8IUC2 63 aa5.21□□□□□ -1.58
TTC39B-201ENST00000297615 LCE2AQ5TA79 106 aaPredicted RBP5.2□□□□□ -1.58
TTC39B-201ENST00000297615 PRO2289Q9P1D8 64 aa5.17□□□□□ -1.58
TTC39B-201ENST00000297615 KRTAP19-5Q3LI72 72 aa5.15□□□□□ -1.58
TTC39B-201ENST00000297615 MUC12Q9UKN1 5478 aa5.12□□□□□ -1.59
TTC39B-201ENST00000297615 KRTAP4-7Q9BYR0 210 aa5.1□□□□□ -1.59
TTC39B-201ENST00000297615 FCGBPQ9Y6R7 5405 aaPredicted RBP5.04□□□□□ -1.6
TTC39B-201ENST00000297615 OBSCNQ5VST9 7968 aa4.96□□□□□ -1.62
TTC39B-201ENST00000297615 CRCT1Q9UGL9 99 aa4.89□□□□□ -1.63
TTC39B-201ENST00000297615 LCE3CQ5T5A8 94 aa4.89□□□□□ -1.63
TTC39B-201ENST00000297615 SYNE1Q8NF91 8797 aaKnown RBP4.89□□□□□ -1.63
TTC39B-201ENST00000297615 SYNE2Q8WXH0 6885 aaKnown RBP4.87□□□□□ -1.63
TTC39B-201ENST00000297615 MACF1Q9UPN3 7388 aaKnown RBP4.83□□□□□ -1.64
TTC39B-201ENST00000297615 KRTAP19-7Q3SYF9 63 aa4.83□□□□□ -1.64
TTC39B-201ENST00000297615 KRTAP4-3Q9BYR4 195 aa4.83□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 96 ms