RNA–Protein interactions for RNA: ENST00000296800.4

PRKAA1-201, Transcript of protein kinase AMP-activated catalytic subunit alpha 1, humanhuman

TSL 1 (best) BASIC

Gene PRKAA1, Length 1,134 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKAA1-201ENST00000296800 COA5Q86WW8 74 aa4.25□□□□□ -1.73
PRKAA1-201ENST00000296800 PKD1P98161 4303 aa4.24□□□□□ -1.73
PRKAA1-201ENST00000296800 TYMSOSQ8TAI1 123 aa4.24□□□□□ -1.73
PRKAA1-201ENST00000296800 FAT2Q9NYQ8 4349 aa4.24□□□□□ -1.73
PRKAA1-201ENST00000296800 SPINK1P00995 79 aa4.23□□□□□ -1.73
PRKAA1-201ENST00000296800 RPS29P62273 56 aaKnown RBP4.23□□□□□ -1.73
PRKAA1-201ENST00000296800 PRO0628Q9UI54 55 aa4.23□□□□□ -1.73
PRKAA1-201ENST00000296800 KRTAP16-1A8MUX0 517 aa4.21□□□□□ -1.74
PRKAA1-201ENST00000296800 Q5W150 140 aa4.21□□□□□ -1.74
PRKAA1-201ENST00000296800 BRK1Q8WUW1 75 aa4.21□□□□□ -1.74
PRKAA1-201ENST00000296800 HSPG2P98160 4391 aa4.21□□□□□ -1.74
PRKAA1-201ENST00000296800 A0A1B0GVY2 172 aa4.2□□□□□ -1.74
PRKAA1-201ENST00000296800 SPAG11AQ6PDA7 123 aa4.2□□□□□ -1.74
PRKAA1-201ENST00000296800 LINC00304Q8N9R0 145 aa4.2□□□□□ -1.74
PRKAA1-201ENST00000296800 PSPHP1O15172 72 aa4.17□□□□□ -1.74
PRKAA1-201ENST00000296800 HRES1P13985 223 aa4.17□□□□□ -1.74
PRKAA1-201ENST00000296800 PRR15LQ9BU68 103 aa4.17□□□□□ -1.74
PRKAA1-201ENST00000296800 A8MUN3 132 aa4.16□□□□□ -1.74
PRKAA1-201ENST00000296800 Q5VV11 94 aa4.16□□□□□ -1.74
PRKAA1-201ENST00000296800 DMAC1Q96GE9 116 aa4.16□□□□□ -1.74
PRKAA1-201ENST00000296800 LRP1BQ9NZR2 4599 aa4.15□□□□□ -1.74
PRKAA1-201ENST00000296800 A0A0A0MQY5 61 aa4.15□□□□□ -1.75
PRKAA1-201ENST00000296800 ACYP2P14621 99 aa4.15□□□□□ -1.75
PRKAA1-201ENST00000296800 Q75L30 129 aa4.15□□□□□ -1.75
PRKAA1-201ENST00000296800 LCE3CQ5T5A8 94 aa4.14□□□□□ -1.75
PRKAA1-201ENST00000296800 RETNLBQ9BQ08 111 aa4.14□□□□□ -1.75
PRKAA1-201ENST00000296800 LINC01558Q9Y6Z2 57 aa4.14□□□□□ -1.75
PRKAA1-201ENST00000296800 RNF213Q63HN8 5207 aa4.14□□□□□ -1.75
PRKAA1-201ENST00000296800 DYNC1H1Q14204 4646 aaKnown RBP4.14□□□□□ -1.75
PRKAA1-201ENST00000296800 FLG2Q5D862 2391 aaPredicted RBP4.13□□□□□ -1.75
PRKAA1-201ENST00000296800 KRTAP10-4P60372 401 aaPredicted RBP4.13□□□□□ -1.75
PRKAA1-201ENST00000296800 KRTAP5-2Q701N4 177 aa4.13□□□□□ -1.75
PRKAA1-201ENST00000296800 VPS13BQ7Z7G8 4022 aa4.13□□□□□ -1.75
PRKAA1-201ENST00000296800 CHKB-CPT1BH3BT56 60 aa4.12□□□□□ -1.75
PRKAA1-201ENST00000296800 SMR3BP02814 79 aaPredicted RBP4.12□□□□□ -1.75
PRKAA1-201ENST00000296800 PKHD1L1Q86WI1 4243 aa4.12□□□□□ -1.75
PRKAA1-201ENST00000296800 C7orf65Q6ZTY9 151 aa4.11□□□□□ -1.75
PRKAA1-201ENST00000296800 APOBP04114 4563 aaKnown RBP4.09□□□□□ -1.76
PRKAA1-201ENST00000296800 A6NED7 52 aa4.07□□□□□ -1.76
PRKAA1-201ENST00000296800 C20orf166-AS1Q96NR2 134 aa4.07□□□□□ -1.76
PRKAA1-201ENST00000296800 A8MUU9 505 aa4.06□□□□□ -1.76
PRKAA1-201ENST00000296800 CDC42SE1Q9NRR8 79 aa4.05□□□□□ -1.76
PRKAA1-201ENST00000296800 HMCN2Q8NDA2 5059 aa4.04□□□□□ -1.76
PRKAA1-201ENST00000296800 MYCBP2O75592 4640 aa4.04□□□□□ -1.76
PRKAA1-201ENST00000296800 MUC2Q02817 5179 aa4.03□□□□□ -1.76
PRKAA1-201ENST00000296800 C9orf92A6NGG3 77 aa4.03□□□□□ -1.76
PRKAA1-201ENST00000296800 A0A1B0GU69 56 aa4.01□□□□□ -1.77
PRKAA1-201ENST00000296800 Q5VSD8 79 aa4.01□□□□□ -1.77
PRKAA1-201ENST00000296800 SPINK7P58062 85 aa4□□□□□ -1.77
PRKAA1-201ENST00000296800 SPTSSBQ8NFR3 76 aa4□□□□□ -1.77
PRKAA1-201ENST00000296800 ATP11AUNQ6ZP68 121 aa3.99□□□□□ -1.77
PRKAA1-201ENST00000296800 LCA10Q71F78 164 aa3.99□□□□□ -1.77
PRKAA1-201ENST00000296800 A8MU10 97 aa3.98□□□□□ -1.77
PRKAA1-201ENST00000296800 KRTAP10-8P60410 259 aa3.96□□□□□ -1.78
PRKAA1-201ENST00000296800 PMAIP1Q13794 54 aa3.95□□□□□ -1.78
PRKAA1-201ENST00000296800 LCE3AQ5TA76 89 aa3.95□□□□□ -1.78
PRKAA1-201ENST00000296800 FAT1Q14517 4588 aa3.95□□□□□ -1.78
PRKAA1-201ENST00000296800 FSIP2Q5CZC0 6907 aa3.93□□□□□ -1.78
PRKAA1-201ENST00000296800 A6NN06 94 aa3.93□□□□□ -1.78
PRKAA1-201ENST00000296800 UQCR11O14957 56 aa3.93□□□□□ -1.78
PRKAA1-201ENST00000296800 SEC61GP60059 68 aa3.93□□□□□ -1.78
PRKAA1-201ENST00000296800 TNXBP22105 4242 aa3.92□□□□□ -1.78
PRKAA1-201ENST00000296800 RPL37P61927 97 aaKnown RBP3.92□□□□□ -1.78
PRKAA1-201ENST00000296800 KTN1-AS1Q86SY8 53 aa3.92□□□□□ -1.78
PRKAA1-201ENST00000296800 FAT4Q6V0I7 4981 aa3.91□□□□□ -1.78
PRKAA1-201ENST00000296800 SPATA8Q6RVD6 105 aa3.91□□□□□ -1.78
PRKAA1-201ENST00000296800 COX6B2Q6YFQ2 88 aa3.91□□□□□ -1.78
PRKAA1-201ENST00000296800 MIR22HGQ0VDD5 57 aa3.9□□□□□ -1.79
PRKAA1-201ENST00000296800 CRCT1Q9UGL9 99 aa3.9□□□□□ -1.79
PRKAA1-201ENST00000296800 FAT3Q8TDW7 4589 aa3.88□□□□□ -1.79
PRKAA1-201ENST00000296800 MT1HL1P0DM35 61 aa3.86□□□□□ -1.79
PRKAA1-201ENST00000296800 H1FX-AS1Q4G0G2 97 aa3.82□□□□□ -1.8
PRKAA1-201ENST00000296800 TPRXLQ17RH7 258 aa3.81□□□□□ -1.8
PRKAA1-201ENST00000296800 LRP2P98164 4655 aa3.81□□□□□ -1.8
PRKAA1-201ENST00000296800 SEC61BP60468 96 aaKnown RBP3.8□□□□□ -1.8
PRKAA1-201ENST00000296800 S4R3F8 94 aa3.8□□□□□ -1.8
PRKAA1-201ENST00000296800 LRP1Q07954 4544 aaKnown RBP3.79□□□□□ -1.8
PRKAA1-201ENST00000296800 A0A1B0GU33 70 aa3.79□□□□□ -1.8
PRKAA1-201ENST00000296800 H0YAA0 97 aa3.79□□□□□ -1.8
PRKAA1-201ENST00000296800 LCE3EQ5T5B0 92 aa3.76□□□□□ -1.81
PRKAA1-201ENST00000296800 RBM12B-AS1Q9P1G2 102 aa3.73□□□□□ -1.81
PRKAA1-201ENST00000296800 K7ERS5 55 aa3.72□□□□□ -1.81
PRKAA1-201ENST00000296800 PRAC1Q96KF2 57 aa3.69□□□□□ -1.82
PRKAA1-201ENST00000296800 NDUFAF8A1L188 74 aa3.67□□□□□ -1.82
PRKAA1-201ENST00000296800 ADM2Q7Z4H4 148 aa3.67□□□□□ -1.82
PRKAA1-201ENST00000296800 KRTAP12-2P59991 146 aa3.66□□□□□ -1.82
PRKAA1-201ENST00000296800 CSAG1Q6PB30 78 aa3.64□□□□□ -1.83
PRKAA1-201ENST00000296800 KRTAP5-5Q701N2 237 aaPredicted RBP3.64□□□□□ -1.83
PRKAA1-201ENST00000296800 KRTAP13-4Q3LI77 160 aa3.63□□□□□ -1.83
PRKAA1-201ENST00000296800 P0C880 135 aa3.62□□□□□ -1.83
PRKAA1-201ENST00000296800 A0A0D9SG42 100 aa3.59□□□□□ -1.83
PRKAA1-201ENST00000296800 M0QZ58 72 aa3.58□□□□□ -1.84
PRKAA1-201ENST00000296800 ROMO1P60602 79 aa3.58□□□□□ -1.84
PRKAA1-201ENST00000296800 LINC01554Q52M75 96 aa3.58□□□□□ -1.84
PRKAA1-201ENST00000296800 KRTAP25-1Q3LHN0 102 aa3.57□□□□□ -1.84
PRKAA1-201ENST00000296800 MUC17Q685J3 4493 aa3.56□□□□□ -1.84
PRKAA1-201ENST00000296800 KRTAP12-1P59990 96 aa3.52□□□□□ -1.85
PRKAA1-201ENST00000296800 KRTAP4-1Q9BYQ7 146 aa3.52□□□□□ -1.85
PRKAA1-201ENST00000296800 LPAP08519 4548 aa3.52□□□□□ -1.85
PRKAA1-201ENST00000296800 SPINT4Q6UDR6 99 aa3.49□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms