RNA–Protein interactions for RNA: ENST00000296658.3

CMBL-201, Transcript of carboxymethylenebutenolidase homolog, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CMBL, Length 2,335 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMBL-201ENST00000296658 ADM2Q7Z4H4 148 aa7.95□□□□□ -1.14
CMBL-201ENST00000296658 PRAC1Q96KF2 57 aa7.95□□□□□ -1.14
CMBL-201ENST00000296658 ABCA13Q86UQ4 5058 aa7.93□□□□□ -1.14
CMBL-201ENST00000296658 C20orf166-AS1Q96NR2 134 aa7.91□□□□□ -1.14
CMBL-201ENST00000296658 DMBT1Q9UGM3 2413 aaPredicted RBP7.91□□□□□ -1.14
CMBL-201ENST00000296658 A8MUU9 505 aa7.91□□□□□ -1.14
CMBL-201ENST00000296658 KRTAP3-1Q9BYR8 98 aa7.89□□□□□ -1.15
CMBL-201ENST00000296658 H0YAA0 97 aa7.79□□□□□ -1.16
CMBL-201ENST00000296658 TPRXLQ17RH7 258 aa7.73□□□□□ -1.17
CMBL-201ENST00000296658 A0A1B0GU33 70 aa7.72□□□□□ -1.17
CMBL-201ENST00000296658 CSAG1Q6PB30 78 aa7.69□□□□□ -1.18
CMBL-201ENST00000296658 XP32Q5T750 250 aa7.69□□□□□ -1.18
CMBL-201ENST00000296658 H1FX-AS1Q4G0G2 97 aa7.68□□□□□ -1.18
CMBL-201ENST00000296658 PCLOQ9Y6V0 5065 aa7.68□□□□□ -1.18
CMBL-201ENST00000296658 LINC01554Q52M75 96 aa7.68□□□□□ -1.18
CMBL-201ENST00000296658 COX6B2Q6YFQ2 88 aa7.68□□□□□ -1.18
CMBL-201ENST00000296658 RPL37P61927 97 aaKnown RBP7.65□□□□□ -1.18
CMBL-201ENST00000296658 A0A0A0MQY5 61 aa7.57□□□□□ -1.2
CMBL-201ENST00000296658 KRTAP3-3Q9BYR6 98 aa7.55□□□□□ -1.2
CMBL-201ENST00000296658 LPAP08519 4548 aa7.55□□□□□ -1.2
CMBL-201ENST00000296658 H3BS24 57 aa7.52□□□□□ -1.2
CMBL-201ENST00000296658 KRTAP10-6P60371 365 aaPredicted RBP7.5□□□□□ -1.21
CMBL-201ENST00000296658 HERC1Q15751 4861 aa7.48□□□□□ -1.21
CMBL-201ENST00000296658 LRP2P98164 4655 aa7.47□□□□□ -1.21
CMBL-201ENST00000296658 SEC61BP60468 96 aaKnown RBP7.47□□□□□ -1.21
CMBL-201ENST00000296658 KRTAP25-1Q3LHN0 102 aa7.47□□□□□ -1.21
CMBL-201ENST00000296658 KRTAP3-2Q9BYR7 98 aa7.45□□□□□ -1.22
CMBL-201ENST00000296658 KRTAP13-4Q3LI77 160 aa7.44□□□□□ -1.22
CMBL-201ENST00000296658 HMCN2Q8NDA2 5059 aa7.43□□□□□ -1.22
CMBL-201ENST00000296658 MUC17Q685J3 4493 aa7.42□□□□□ -1.22
CMBL-201ENST00000296658 K7ERS5 55 aa7.41□□□□□ -1.22
CMBL-201ENST00000296658 S4R3F8 94 aa7.39□□□□□ -1.23
CMBL-201ENST00000296658 CRIPTQ9P021 101 aa7.38□□□□□ -1.23
CMBL-201ENST00000296658 A0A0D9SG42 100 aa7.34□□□□□ -1.23
CMBL-201ENST00000296658 P0C880 135 aa7.34□□□□□ -1.23
CMBL-201ENST00000296658 ROMO1P60602 79 aa7.32□□□□□ -1.24
CMBL-201ENST00000296658 KRTAP4-1Q9BYQ7 146 aa7.28□□□□□ -1.24
CMBL-201ENST00000296658 KRTAP12-2P59991 146 aa7.19□□□□□ -1.26
CMBL-201ENST00000296658 KRTAP12-1P59990 96 aa7.12□□□□□ -1.27
CMBL-201ENST00000296658 C10orf95Q9H7T3 257 aa7.11□□□□□ -1.27
CMBL-201ENST00000296658 KRTAP19-2Q3LHN2 52 aa7.1□□□□□ -1.27
CMBL-201ENST00000296658 SPINT4Q6UDR6 99 aa7.07□□□□□ -1.28
CMBL-201ENST00000296658 M0QZ58 72 aa7.05□□□□□ -1.28
CMBL-201ENST00000296658 RNF213Q63HN8 5207 aa7.03□□□□□ -1.28
CMBL-201ENST00000296658 UBR4Q5T4S7 5183 aa7.03□□□□□ -1.28
CMBL-201ENST00000296658 MUC2Q02817 5179 aa7.02□□□□□ -1.29
CMBL-201ENST00000296658 LCE2CQ5TA81 110 aa6.96□□□□□ -1.3
CMBL-201ENST00000296658 FLGP20930 4061 aaPredicted RBP6.9□□□□□ -1.3
CMBL-201ENST00000296658 R4GN34 69 aa6.86□□□□□ -1.31
CMBL-201ENST00000296658 KRTAP15-1Q3LI76 137 aa6.85□□□□□ -1.31
CMBL-201ENST00000296658 LORP23490 312 aaPredicted RBP6.85□□□□□ -1.31
CMBL-201ENST00000296658 MT1HP80294 61 aa6.82□□□□□ -1.32
CMBL-201ENST00000296658 FAT4Q6V0I7 4981 aa6.79□□□□□ -1.32
CMBL-201ENST00000296658 M0R2T5 61 aa6.73□□□□□ -1.33
CMBL-201ENST00000296658 LCE2DQ5TA82 110 aaPredicted RBP6.71□□□□□ -1.33
CMBL-201ENST00000296658 NDUFAF8A1L188 74 aa6.68□□□□□ -1.34
CMBL-201ENST00000296658 LCE2AQ5TA79 106 aaPredicted RBP6.62□□□□□ -1.35
CMBL-201ENST00000296658 KRTAP9-8Q9BYQ0 159 aa6.57□□□□□ -1.36
CMBL-201ENST00000296658 MT2AP02795 61 aa6.53□□□□□ -1.36
CMBL-201ENST00000296658 CAMK2N1Q7Z7J9 78 aa6.51□□□□□ -1.37
CMBL-201ENST00000296658 PLAC4Q8WY50 150 aa6.51□□□□□ -1.37
CMBL-201ENST00000296658 MT1FP04733 61 aa6.48□□□□□ -1.37
CMBL-201ENST00000296658 KRTAP10-10P60014 251 aa6.47□□□□□ -1.37
CMBL-201ENST00000296658 PP632Q6XCG6 107 aa6.43□□□□□ -1.38
CMBL-201ENST00000296658 SPRR2GQ9BYE4 73 aa6.38□□□□□ -1.39
CMBL-201ENST00000296658 KRTAP19-1Q8IUB9 90 aa6.36□□□□□ -1.39
CMBL-201ENST00000296658 KRTAP9-3Q9BYQ3 159 aa6.33□□□□□ -1.4
CMBL-201ENST00000296658 KRTAP23-1A1A580 65 aa6.32□□□□□ -1.4
CMBL-201ENST00000296658 TNP1P09430 55 aa6.28□□□□□ -1.4
CMBL-201ENST00000296658 KRTAP19-8Q3LI54 63 aa6.24□□□□□ -1.41
CMBL-201ENST00000296658 LUZP6Q538Z0 58 aa6.16□□□□□ -1.42
CMBL-201ENST00000296658 LCE2BO14633 110 aa6.15□□□□□ -1.42
CMBL-201ENST00000296658 MT1BP07438 61 aa6.13□□□□□ -1.43
CMBL-201ENST00000296658 SPRR5A0A1B0GTR4 108 aa6.09□□□□□ -1.43
CMBL-201ENST00000296658 LCE3AQ5TA76 89 aa5.98□□□□□ -1.45
CMBL-201ENST00000296658 USH2AO75445 5202 aa5.96□□□□□ -1.46
CMBL-201ENST00000296658 KRTAP10-5P60370 271 aa5.91□□□□□ -1.46
CMBL-201ENST00000296658 MT1XP80297 61 aa5.91□□□□□ -1.46
CMBL-201ENST00000296658 PRO2289Q9P1D8 64 aa5.88□□□□□ -1.47
CMBL-201ENST00000296658 KRTAP8-1Q8IUC2 63 aa5.84□□□□□ -1.47
CMBL-201ENST00000296658 KRTAP19-6Q3LI70 58 aa5.82□□□□□ -1.48
CMBL-201ENST00000296658 KRTAP9-2Q9BYQ4 174 aa5.82□□□□□ -1.48
CMBL-201ENST00000296658 SSPOA2VEC9 5147 aa5.76□□□□□ -1.49
CMBL-201ENST00000296658 KRTAP10-7P60409 375 aaPredicted RBP5.74□□□□□ -1.49
CMBL-201ENST00000296658 KRTAP10-12P60413 245 aa5.73□□□□□ -1.49
CMBL-201ENST00000296658 KRTAP12-3P60328 96 aa5.69□□□□□ -1.5
CMBL-201ENST00000296658 FSIP2Q5CZC0 6907 aa5.65□□□□□ -1.5
CMBL-201ENST00000296658 CRCT1Q9UGL9 99 aa5.62□□□□□ -1.51
CMBL-201ENST00000296658 FCGBPQ9Y6R7 5405 aaPredicted RBP5.55□□□□□ -1.52
CMBL-201ENST00000296658 KMT2DO14686 5537 aa5.5□□□□□ -1.53
CMBL-201ENST00000296658 KRTAP19-5Q3LI72 72 aa5.46□□□□□ -1.54
CMBL-201ENST00000296658 KRTAP4-8A0A0G2JLE6 195 aa5.45□□□□□ -1.54
CMBL-201ENST00000296658 KRTAP4-8Q9BYQ9 185 aa5.45□□□□□ -1.54
CMBL-201ENST00000296658 KRTAP9-6A0A140TA67 174 aa5.4□□□□□ -1.54
CMBL-201ENST00000296658 LCE3CQ5T5A8 94 aa5.37□□□□□ -1.55
CMBL-201ENST00000296658 INE1O15225 51 aa5.34□□□□□ -1.56
CMBL-201ENST00000296658 KRTAP19-7Q3SYF9 63 aa5.28□□□□□ -1.56
CMBL-201ENST00000296658 MACF1Q9UPN3 7388 aaKnown RBP5.26□□□□□ -1.57
CMBL-201ENST00000296658 KRTAP9-6A8MVA2 160 aa5.24□□□□□ -1.57
CMBL-201ENST00000296658 KRTAP9-1A8MXZ3 250 aaPredicted RBP5.2□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms