RNA–Protein interactions for RNA: ENST00000291295.13

CALM3-201, Transcript of calmodulin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CALM3, Length 2,289 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALM3-201ENST00000291295 KRTAP25-1Q3LHN0 102 aa9.97□□□□□ -0.81
CALM3-201ENST00000291295 KRTAP10-8P60410 259 aa9.94□□□□□ -0.82
CALM3-201ENST00000291295 ROMO1P60602 79 aa9.89□□□□□ -0.83
CALM3-201ENST00000291295 KRTAP4-5Q9BYR2 181 aa9.87□□□□□ -0.83
CALM3-201ENST00000291295 DMBT1Q9UGM3 2413 aaPredicted RBP9.87□□□□□ -0.83
CALM3-201ENST00000291295 A0A1B0GU33 70 aa9.83□□□□□ -0.84
CALM3-201ENST00000291295 MT1HL1P0DM35 61 aa9.82□□□□□ -0.84
CALM3-201ENST00000291295 C9orf92A6NGG3 77 aa9.78□□□□□ -0.84
CALM3-201ENST00000291295 H1FX-AS1Q4G0G2 97 aa9.78□□□□□ -0.84
CALM3-201ENST00000291295 BIRC6Q9NR09 4857 aa9.78□□□□□ -0.84
CALM3-201ENST00000291295 ABCA13Q86UQ4 5058 aa9.74□□□□□ -0.85
CALM3-201ENST00000291295 KRTAP3-1Q9BYR8 98 aa9.74□□□□□ -0.85
CALM3-201ENST00000291295 CRIPTQ9P021 101 aa9.72□□□□□ -0.85
CALM3-201ENST00000291295 HERC2O95714 4834 aa9.69□□□□□ -0.86
CALM3-201ENST00000291295 P0C880 135 aa9.65□□□□□ -0.86
CALM3-201ENST00000291295 C20orf166-AS1Q96NR2 134 aa9.6□□□□□ -0.87
CALM3-201ENST00000291295 COX6B2Q6YFQ2 88 aa9.59□□□□□ -0.87
CALM3-201ENST00000291295 K7ERS5 55 aa9.58□□□□□ -0.88
CALM3-201ENST00000291295 J3QL48 77 aa9.48□□□□□ -0.89
CALM3-201ENST00000291295 XP32Q5T750 250 aa9.47□□□□□ -0.89
CALM3-201ENST00000291295 LPAP08519 4548 aa9.42□□□□□ -0.9
CALM3-201ENST00000291295 TPRXLQ17RH7 258 aa9.42□□□□□ -0.9
CALM3-201ENST00000291295 RPL37P61927 97 aaKnown RBP9.4□□□□□ -0.9
CALM3-201ENST00000291295 PCLOQ9Y6V0 5065 aa9.39□□□□□ -0.91
CALM3-201ENST00000291295 KRTAP10-6P60371 365 aaPredicted RBP9.38□□□□□ -0.91
CALM3-201ENST00000291295 KRTAP13-4Q3LI77 160 aa9.38□□□□□ -0.91
CALM3-201ENST00000291295 LRP2P98164 4655 aa9.37□□□□□ -0.91
CALM3-201ENST00000291295 SPINT4Q6UDR6 99 aa9.35□□□□□ -0.91
CALM3-201ENST00000291295 A0A0D9SG42 100 aa9.31□□□□□ -0.92
CALM3-201ENST00000291295 C10orf95Q9H7T3 257 aa9.29□□□□□ -0.92
CALM3-201ENST00000291295 KRTAP3-3Q9BYR6 98 aa9.29□□□□□ -0.92
CALM3-201ENST00000291295 KRTAP3-2Q9BYR7 98 aa9.26□□□□□ -0.93
CALM3-201ENST00000291295 KRTAP15-1Q3LI76 137 aa9.24□□□□□ -0.93
CALM3-201ENST00000291295 HERC1Q15751 4861 aa9.24□□□□□ -0.93
CALM3-201ENST00000291295 NDUFAF8A1L188 74 aa9.2□□□□□ -0.94
CALM3-201ENST00000291295 S4R3F8 94 aa9.12□□□□□ -0.95
CALM3-201ENST00000291295 KRTAP12-2P59991 146 aa9.11□□□□□ -0.95
CALM3-201ENST00000291295 HMCN2Q8NDA2 5059 aa9.06□□□□□ -0.96
CALM3-201ENST00000291295 SEC61BP60468 96 aaKnown RBP9.03□□□□□ -0.96
CALM3-201ENST00000291295 KRTAP12-1P59990 96 aa8.99□□□□□ -0.97
CALM3-201ENST00000291295 KRTAP4-1Q9BYQ7 146 aa8.94□□□□□ -0.98
CALM3-201ENST00000291295 MUC17Q685J3 4493 aa8.94□□□□□ -0.98
CALM3-201ENST00000291295 MUC2Q02817 5179 aa8.89□□□□□ -0.99
CALM3-201ENST00000291295 M0QZ58 72 aa8.74□□□□□ -1.01
CALM3-201ENST00000291295 UBR4Q5T4S7 5183 aa8.72□□□□□ -1.01
CALM3-201ENST00000291295 KRTAP19-2Q3LHN2 52 aa8.68□□□□□ -1.02
CALM3-201ENST00000291295 RNF213Q63HN8 5207 aa8.6□□□□□ -1.03
CALM3-201ENST00000291295 PLAC4Q8WY50 150 aa8.56□□□□□ -1.04
CALM3-201ENST00000291295 FAT4Q6V0I7 4981 aa8.52□□□□□ -1.05
CALM3-201ENST00000291295 FLGP20930 4061 aaPredicted RBP8.52□□□□□ -1.05
CALM3-201ENST00000291295 A0A0A0MQY5 61 aa8.49□□□□□ -1.05
CALM3-201ENST00000291295 LCE2CQ5TA81 110 aa8.44□□□□□ -1.06
CALM3-201ENST00000291295 R4GN34 69 aa8.43□□□□□ -1.06
CALM3-201ENST00000291295 LUZP6Q538Z0 58 aa8.42□□□□□ -1.06
CALM3-201ENST00000291295 LORP23490 312 aaPredicted RBP8.32□□□□□ -1.08
CALM3-201ENST00000291295 MT1HP80294 61 aa8.27□□□□□ -1.09
CALM3-201ENST00000291295 M0R2T5 61 aa8.23□□□□□ -1.09
CALM3-201ENST00000291295 PP632Q6XCG6 107 aa8.2□□□□□ -1.1
CALM3-201ENST00000291295 CAMK2N1Q7Z7J9 78 aa8.05□□□□□ -1.12
CALM3-201ENST00000291295 KRTAP9-8Q9BYQ0 159 aa7.97□□□□□ -1.13
CALM3-201ENST00000291295 MT2AP02795 61 aa7.96□□□□□ -1.14
CALM3-201ENST00000291295 MT1FP04733 61 aa7.94□□□□□ -1.14
CALM3-201ENST00000291295 SPRR5A0A1B0GTR4 108 aa7.92□□□□□ -1.14
CALM3-201ENST00000291295 KRTAP10-10P60014 251 aa7.91□□□□□ -1.14
CALM3-201ENST00000291295 LCE2AQ5TA79 106 aaPredicted RBP7.84□□□□□ -1.15
CALM3-201ENST00000291295 KRTAP19-1Q8IUB9 90 aa7.82□□□□□ -1.16
CALM3-201ENST00000291295 TNP1P09430 55 aa7.81□□□□□ -1.16
CALM3-201ENST00000291295 SPRR2GQ9BYE4 73 aa7.81□□□□□ -1.16
CALM3-201ENST00000291295 KRTAP23-1A1A580 65 aa7.81□□□□□ -1.16
CALM3-201ENST00000291295 KRTAP9-3Q9BYQ3 159 aa7.67□□□□□ -1.18
CALM3-201ENST00000291295 KRTAP19-8Q3LI54 63 aa7.57□□□□□ -1.2
CALM3-201ENST00000291295 MT1BP07438 61 aa7.52□□□□□ -1.21
CALM3-201ENST00000291295 PRO2289Q9P1D8 64 aa7.48□□□□□ -1.21
CALM3-201ENST00000291295 LCE2BO14633 110 aa7.48□□□□□ -1.21
CALM3-201ENST00000291295 LCE3AQ5TA76 89 aa7.4□□□□□ -1.22
CALM3-201ENST00000291295 USH2AO75445 5202 aa7.39□□□□□ -1.23
CALM3-201ENST00000291295 INE1O15225 51 aa7.31□□□□□ -1.24
CALM3-201ENST00000291295 MT1XP80297 61 aa7.3□□□□□ -1.24
CALM3-201ENST00000291295 KRTAP10-5P60370 271 aa7.3□□□□□ -1.24
CALM3-201ENST00000291295 KRTAP8-1Q8IUC2 63 aa7.19□□□□□ -1.26
CALM3-201ENST00000291295 FSIP2Q5CZC0 6907 aa7.18□□□□□ -1.26
CALM3-201ENST00000291295 SSPOA2VEC9 5147 aa7.09□□□□□ -1.27
CALM3-201ENST00000291295 KRTAP10-7P60409 375 aaPredicted RBP7.06□□□□□ -1.28
CALM3-201ENST00000291295 LCE2DQ5TA82 110 aaPredicted RBP7.02□□□□□ -1.29
CALM3-201ENST00000291295 KRTAP12-3P60328 96 aa7□□□□□ -1.29
CALM3-201ENST00000291295 KRTAP10-12P60413 245 aa7□□□□□ -1.29
CALM3-201ENST00000291295 KRTAP19-6Q3LI70 58 aa6.92□□□□□ -1.3
CALM3-201ENST00000291295 KMT2DO14686 5537 aa6.89□□□□□ -1.31
CALM3-201ENST00000291295 KRTAP4-8A0A0G2JLE6 195 aa6.79□□□□□ -1.32
CALM3-201ENST00000291295 KRTAP4-8Q9BYQ9 185 aa6.79□□□□□ -1.32
CALM3-201ENST00000291295 KRTAP9-2Q9BYQ4 174 aa6.78□□□□□ -1.32
CALM3-201ENST00000291295 FCGBPQ9Y6R7 5405 aaPredicted RBP6.75□□□□□ -1.33
CALM3-201ENST00000291295 KRTAP19-5Q3LI72 72 aa6.64□□□□□ -1.35
CALM3-201ENST00000291295 LCE3CQ5T5A8 94 aa6.62□□□□□ -1.35
CALM3-201ENST00000291295 MACF1Q9UPN3 7388 aaKnown RBP6.54□□□□□ -1.36
CALM3-201ENST00000291295 CRCT1Q9UGL9 99 aa6.53□□□□□ -1.36
CALM3-201ENST00000291295 KRTAP19-7Q3SYF9 63 aa6.52□□□□□ -1.37
CALM3-201ENST00000291295 KRTAP9-6A8MVA2 160 aa6.51□□□□□ -1.37
CALM3-201ENST00000291295 KRTAP2-3P0C7H8 128 aa6.41□□□□□ -1.38
CALM3-201ENST00000291295 KRTAP2-4Q9BYR9 128 aa6.41□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 77.7 ms