RNA–Protein interactions for RNA: ENST00000289488.6

LRTOMT-201, Transcript of leucine rich transmembrane and O-methyltransferase domain containing, humanhuman

TSL 1 (best) BASIC

Gene LRTOMT, Length 2,332 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRTOMT-201ENST00000289488 MIR22HGQ0VDD5 57 aa5.46□□□□□ -1.54
LRTOMT-201ENST00000289488 RETNLBQ9BQ08 111 aa5.45□□□□□ -1.54
LRTOMT-201ENST00000289488 UQCR11O14957 56 aa5.45□□□□□ -1.54
LRTOMT-201ENST00000289488 HERC1Q15751 4861 aa5.44□□□□□ -1.54
LRTOMT-201ENST00000289488 IGKV2-30P06310 120 aa5.41□□□□□ -1.54
LRTOMT-201ENST00000289488 RPS29P62273 56 aaKnown RBP5.37□□□□□ -1.55
LRTOMT-201ENST00000289488 CSAG1Q6PB30 78 aa5.37□□□□□ -1.55
LRTOMT-201ENST00000289488 LPAP08519 4548 aa5.37□□□□□ -1.55
LRTOMT-201ENST00000289488 LRP2P98164 4655 aa5.32□□□□□ -1.56
LRTOMT-201ENST00000289488 C9orf92A6NGG3 77 aa5.31□□□□□ -1.56
LRTOMT-201ENST00000289488 KRTAP16-1A8MUX0 517 aa5.3□□□□□ -1.56
LRTOMT-201ENST00000289488 IGKV2D-30A0A075B6S6 120 aa5.29□□□□□ -1.56
LRTOMT-201ENST00000289488 HMCN2Q8NDA2 5059 aa5.23□□□□□ -1.57
LRTOMT-201ENST00000289488 A8MUU9 505 aa5.23□□□□□ -1.57
LRTOMT-201ENST00000289488 KRTAP25-1Q3LHN0 102 aa5.22□□□□□ -1.57
LRTOMT-201ENST00000289488 H0YAA0 97 aa5.2□□□□□ -1.58
LRTOMT-201ENST00000289488 MUC2Q02817 5179 aa5.18□□□□□ -1.58
LRTOMT-201ENST00000289488 XP32Q5T750 250 aa5.17□□□□□ -1.58
LRTOMT-201ENST00000289488 ROMO1P60602 79 aa5.16□□□□□ -1.58
LRTOMT-201ENST00000289488 TPRXLQ17RH7 258 aa5.15□□□□□ -1.58
LRTOMT-201ENST00000289488 C20orf166-AS1Q96NR2 134 aa5.14□□□□□ -1.59
LRTOMT-201ENST00000289488 UBR4Q5T4S7 5183 aa5.13□□□□□ -1.59
LRTOMT-201ENST00000289488 A0A1B0GU33 70 aa5.12□□□□□ -1.59
LRTOMT-201ENST00000289488 H1FX-AS1Q4G0G2 97 aa5.11□□□□□ -1.59
LRTOMT-201ENST00000289488 KRTAP3-3Q9BYR6 98 aa5.11□□□□□ -1.59
LRTOMT-201ENST00000289488 KRTAP3-2Q9BYR7 98 aa5.11□□□□□ -1.59
LRTOMT-201ENST00000289488 LCE2DQ5TA82 110 aaPredicted RBP5.1□□□□□ -1.59
LRTOMT-201ENST00000289488 RPL37P61927 97 aaKnown RBP5.09□□□□□ -1.59
LRTOMT-201ENST00000289488 RNF213Q63HN8 5207 aa5.08□□□□□ -1.6
LRTOMT-201ENST00000289488 K7ERS5 55 aa5.05□□□□□ -1.6
LRTOMT-201ENST00000289488 KRTAP3-1Q9BYR8 98 aa5.02□□□□□ -1.61
LRTOMT-201ENST00000289488 P0C880 135 aa5.01□□□□□ -1.61
LRTOMT-201ENST00000289488 CRIPTQ9P021 101 aa5□□□□□ -1.61
LRTOMT-201ENST00000289488 MUC17Q685J3 4493 aa5□□□□□ -1.61
LRTOMT-201ENST00000289488 COX6B2Q6YFQ2 88 aa4.99□□□□□ -1.61
LRTOMT-201ENST00000289488 KRTAP4-1Q9BYQ7 146 aa4.98□□□□□ -1.61
LRTOMT-201ENST00000289488 SEC61BP60468 96 aaKnown RBP4.96□□□□□ -1.62
LRTOMT-201ENST00000289488 FAT4Q6V0I7 4981 aa4.94□□□□□ -1.62
LRTOMT-201ENST00000289488 SPINT4Q6UDR6 99 aa4.89□□□□□ -1.63
LRTOMT-201ENST00000289488 KRTAP10-6P60371 365 aaPredicted RBP4.85□□□□□ -1.63
LRTOMT-201ENST00000289488 KRTAP13-4Q3LI77 160 aa4.84□□□□□ -1.63
LRTOMT-201ENST00000289488 KRTAP15-1Q3LI76 137 aa4.82□□□□□ -1.64
LRTOMT-201ENST00000289488 A0A0D9SG42 100 aa4.81□□□□□ -1.64
LRTOMT-201ENST00000289488 C10orf95Q9H7T3 257 aa4.8□□□□□ -1.64
LRTOMT-201ENST00000289488 KRTAP19-2Q3LHN2 52 aa4.8□□□□□ -1.64
LRTOMT-201ENST00000289488 FLGP20930 4061 aaPredicted RBP4.78□□□□□ -1.64
LRTOMT-201ENST00000289488 NDUFAF8A1L188 74 aa4.78□□□□□ -1.64
LRTOMT-201ENST00000289488 S4R3F8 94 aa4.75□□□□□ -1.65
LRTOMT-201ENST00000289488 LCE2CQ5TA81 110 aa4.73□□□□□ -1.65
LRTOMT-201ENST00000289488 KRTAP12-2P59991 146 aa4.72□□□□□ -1.65
LRTOMT-201ENST00000289488 KRTAP12-1P59990 96 aa4.67□□□□□ -1.66
LRTOMT-201ENST00000289488 MT1HP80294 61 aa4.63□□□□□ -1.67
LRTOMT-201ENST00000289488 M0R2T5 61 aa4.59□□□□□ -1.67
LRTOMT-201ENST00000289488 M0QZ58 72 aa4.57□□□□□ -1.68
LRTOMT-201ENST00000289488 KRTAP23-1A1A580 65 aa4.55□□□□□ -1.68
LRTOMT-201ENST00000289488 LCE2AQ5TA79 106 aaPredicted RBP4.51□□□□□ -1.69
LRTOMT-201ENST00000289488 PLAC4Q8WY50 150 aa4.46□□□□□ -1.7
LRTOMT-201ENST00000289488 KRTAP9-8Q9BYQ0 159 aa4.45□□□□□ -1.7
LRTOMT-201ENST00000289488 LORP23490 312 aaPredicted RBP4.45□□□□□ -1.7
LRTOMT-201ENST00000289488 LCE2BO14633 110 aa4.44□□□□□ -1.7
LRTOMT-201ENST00000289488 LUZP6Q538Z0 58 aa4.43□□□□□ -1.7
LRTOMT-201ENST00000289488 MT2AP02795 61 aa4.43□□□□□ -1.7
LRTOMT-201ENST00000289488 MT1FP04733 61 aa4.42□□□□□ -1.7
LRTOMT-201ENST00000289488 KRTAP10-10P60014 251 aa4.39□□□□□ -1.71
LRTOMT-201ENST00000289488 R4GN34 69 aa4.39□□□□□ -1.71
LRTOMT-201ENST00000289488 FSIP2Q5CZC0 6907 aa4.33□□□□□ -1.72
LRTOMT-201ENST00000289488 PP632Q6XCG6 107 aa4.33□□□□□ -1.72
LRTOMT-201ENST00000289488 USH2AO75445 5202 aa4.32□□□□□ -1.72
LRTOMT-201ENST00000289488 KRTAP19-1Q8IUB9 90 aa4.29□□□□□ -1.72
LRTOMT-201ENST00000289488 KRTAP9-3Q9BYQ3 159 aa4.28□□□□□ -1.72
LRTOMT-201ENST00000289488 SPRR2GQ9BYE4 73 aa4.25□□□□□ -1.73
LRTOMT-201ENST00000289488 CAMK2N1Q7Z7J9 78 aa4.2□□□□□ -1.74
LRTOMT-201ENST00000289488 SPRR5A0A1B0GTR4 108 aa4.15□□□□□ -1.75
LRTOMT-201ENST00000289488 MT1BP07438 61 aa4.14□□□□□ -1.75
LRTOMT-201ENST00000289488 KRTAP19-8Q3LI54 63 aa4.13□□□□□ -1.75
LRTOMT-201ENST00000289488 SSPOA2VEC9 5147 aa4.13□□□□□ -1.75
LRTOMT-201ENST00000289488 TNP1P09430 55 aa4.09□□□□□ -1.76
LRTOMT-201ENST00000289488 KRTAP9-2Q9BYQ4 174 aa4.05□□□□□ -1.76
LRTOMT-201ENST00000289488 KRTAP9-6A0A140TA67 174 aa4.03□□□□□ -1.76
LRTOMT-201ENST00000289488 MT1XP80297 61 aa3.99□□□□□ -1.77
LRTOMT-201ENST00000289488 KRTAP10-5P60370 271 aa3.98□□□□□ -1.77
LRTOMT-201ENST00000289488 PRO2289Q9P1D8 64 aa3.95□□□□□ -1.78
LRTOMT-201ENST00000289488 KMT2DO14686 5537 aa3.95□□□□□ -1.78
LRTOMT-201ENST00000289488 FCGBPQ9Y6R7 5405 aaPredicted RBP3.95□□□□□ -1.78
LRTOMT-201ENST00000289488 KRTAP19-6Q3LI70 58 aa3.91□□□□□ -1.78
LRTOMT-201ENST00000289488 INE1O15225 51 aa3.88□□□□□ -1.79
LRTOMT-201ENST00000289488 CRCT1Q9UGL9 99 aa3.87□□□□□ -1.79
LRTOMT-201ENST00000289488 KRTAP10-7P60409 375 aaPredicted RBP3.86□□□□□ -1.79
LRTOMT-201ENST00000289488 MACF1Q9UPN3 7388 aaKnown RBP3.84□□□□□ -1.79
LRTOMT-201ENST00000289488 LCE3AQ5TA76 89 aa3.83□□□□□ -1.8
LRTOMT-201ENST00000289488 SYNE2Q8WXH0 6885 aaKnown RBP3.8□□□□□ -1.8
LRTOMT-201ENST00000289488 KRTAP4-8A0A0G2JLE6 195 aa3.77□□□□□ -1.81
LRTOMT-201ENST00000289488 KRTAP4-8Q9BYQ9 185 aa3.77□□□□□ -1.81
LRTOMT-201ENST00000289488 KRTAP8-1Q8IUC2 63 aa3.75□□□□□ -1.81
LRTOMT-201ENST00000289488 KRTAP10-12P60413 245 aa3.75□□□□□ -1.81
LRTOMT-201ENST00000289488 MUC12Q9UKN1 5478 aa3.65□□□□□ -1.83
LRTOMT-201ENST00000289488 KRTAP12-3P60328 96 aa3.64□□□□□ -1.83
LRTOMT-201ENST00000289488 KRTAP19-5Q3LI72 72 aa3.59□□□□□ -1.83
LRTOMT-201ENST00000289488 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.59□□□□□ -1.84
LRTOMT-201ENST00000289488 KRTAP19-7Q3SYF9 63 aa3.56□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 68.6 ms